RNA–Protein interactions for RNA: ENST00000215917.11

SRRD-201, Transcript of SRR1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRD, Length 4,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRD-201ENST00000215917 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.51■□□□□ 0.55
SRRD-201ENST00000215917 GNAI1P63096 354 aa18.51■□□□□ 0.55
SRRD-201ENST00000215917 MAPK8IP2Q13387 824 aaPredicted RBP18.5■□□□□ 0.55
SRRD-201ENST00000215917 ADGRB2O60241 1585 aa18.5■□□□□ 0.55
SRRD-201ENST00000215917 FOXO3O43524 673 aa18.5■□□□□ 0.55
SRRD-201ENST00000215917 CT47B1P0C2W7 299 aaPredicted RBP18.5■□□□□ 0.55
SRRD-201ENST00000215917 AATKQ6ZMQ8 1374 aa18.49■□□□□ 0.55
SRRD-201ENST00000215917 CHMP5Q9NZZ3 219 aa18.49■□□□□ 0.55
SRRD-201ENST00000215917 USP19O94966 1318 aa18.49■□□□□ 0.55
SRRD-201ENST00000215917 NECTIN2Q92692 538 aa18.49■□□□□ 0.55
SRRD-201ENST00000215917 IL16Q14005 1332 aa18.48■□□□□ 0.55
SRRD-201ENST00000215917 ESCO1Q5FWF5 840 aa18.48■□□□□ 0.55
SRRD-201ENST00000215917 PRDM10Q9NQV6 1147 aa18.48■□□□□ 0.55
SRRD-201ENST00000215917 VAMP4O75379 141 aa18.47■□□□□ 0.55
SRRD-201ENST00000215917 DRC7Q8IY82 874 aa18.47■□□□□ 0.55
SRRD-201ENST00000215917 AAMPQ13685 434 aa18.46■□□□□ 0.55
SRRD-201ENST00000215917 SLC4A10Q6U841 1118 aa18.46■□□□□ 0.55
SRRD-201ENST00000215917 ZBTB40Q9NUA8 1239 aa18.46■□□□□ 0.55
SRRD-201ENST00000215917 CDK12Q9NYV4 1490 aaPredicted RBP18.46■□□□□ 0.55
SRRD-201ENST00000215917 ARHGAP23Q9P227 1491 aa18.46■□□□□ 0.55
SRRD-201ENST00000215917 MCTP1Q6DN14 999 aa18.46■□□□□ 0.54
SRRD-201ENST00000215917 SLIT1O75093 1534 aa18.45■□□□□ 0.54
SRRD-201ENST00000215917 NCBP3Q53F19 620 aaKnown RBP18.45■□□□□ 0.54
SRRD-201ENST00000215917 CHMP3Q9Y3E7 222 aa18.45■□□□□ 0.54
SRRD-201ENST00000215917 KNDC1Q76NI1 1749 aa18.45■□□□□ 0.54
SRRD-201ENST00000215917 USHBP1Q8N6Y0 703 aa18.45■□□□□ 0.54
SRRD-201ENST00000215917 DDX11L8A8MPP1 907 aa18.44■□□□□ 0.54
SRRD-201ENST00000215917 ESPNB1AK53 854 aa18.44■□□□□ 0.54
SRRD-201ENST00000215917 LMOD3Q0VAK6 560 aa18.44■□□□□ 0.54
SRRD-201ENST00000215917 CASC1Q6TDU7 716 aa18.43■□□□□ 0.54
SRRD-201ENST00000215917 KIAA1211Q6ZU35 1233 aa18.43■□□□□ 0.54
SRRD-201ENST00000215917 TBC1D2Q9BYX2 928 aa18.43■□□□□ 0.54
SRRD-201ENST00000215917 IFT57Q9NWB7 429 aa18.43■□□□□ 0.54
SRRD-201ENST00000215917 ITSN1Q15811 1721 aa18.43■□□□□ 0.54
SRRD-201ENST00000215917 RIMS1Q86UR5 1692 aaKnown RBP18.43■□□□□ 0.54
SRRD-201ENST00000215917 PSME1Q06323 249 aa18.43■□□□□ 0.54
SRRD-201ENST00000215917 PHF8Q9UPP1 1060 aa18.43■□□□□ 0.54
SRRD-201ENST00000215917 MRPL50Q8N5N7 158 aaKnown RBP18.42■□□□□ 0.54
SRRD-201ENST00000215917 CAVIN1Q6NZI2 390 aaKnown RBP18.42■□□□□ 0.54
SRRD-201ENST00000215917 CFAP44Q96MT7 982 aa18.42■□□□□ 0.54
SRRD-201ENST00000215917 TBC1D32Q96NH3 1257 aa18.42■□□□□ 0.54
SRRD-201ENST00000215917 OVOS2A0A0J9YW53 1432 aa18.42■□□□□ 0.54
SRRD-201ENST00000215917 OVOS2Q6IE36 1432 aa18.42■□□□□ 0.54
SRRD-201ENST00000215917 KIAA2012Q0VF49 1180 aa18.42■□□□□ 0.54
SRRD-201ENST00000215917 ALDH1L2Q3SY69 923 aa18.42■□□□□ 0.54
SRRD-201ENST00000215917 CHD1LQ86WJ1 897 aa18.42■□□□□ 0.54
SRRD-201ENST00000215917 RTF1Q92541 710 aaKnown RBP18.42■□□□□ 0.54
SRRD-201ENST00000215917 EYA1Q99502 592 aa18.42■□□□□ 0.54
SRRD-201ENST00000215917 MCM4P33991 863 aa18.41■□□□□ 0.54
SRRD-201ENST00000215917 NASPP49321 788 aaPredicted RBP18.41■□□□□ 0.54
SRRD-201ENST00000215917 MRE11P49959 708 aa18.41■□□□□ 0.54
SRRD-201ENST00000215917 RRAGDQ9NQL2 400 aaPredicted RBP18.41■□□□□ 0.54
SRRD-201ENST00000215917 HDAC1Q13547 482 aaPredicted RBP18.41■□□□□ 0.54
SRRD-201ENST00000215917 TTC21AQ8NDW8 1320 aa18.4■□□□□ 0.54
SRRD-201ENST00000215917 MTHFSDQ2M296 383 aaKnown RBP18.4■□□□□ 0.54
SRRD-201ENST00000215917 MON2Q7Z3U7 1717 aa18.4■□□□□ 0.54
SRRD-201ENST00000215917 DIP2AQ14689 1571 aa18.4■□□□□ 0.54
SRRD-201ENST00000215917 ORAI2Q96SN7 254 aa18.4■□□□□ 0.54
SRRD-201ENST00000215917 GRPEL1Q9HAV7 217 aa18.4■□□□□ 0.54
SRRD-201ENST00000215917 PODXL2Q9NZ53 605 aa18.4■□□□□ 0.54
SRRD-201ENST00000215917 PTCH1Q13635 1447 aa18.4■□□□□ 0.54
SRRD-201ENST00000215917 CEP170BQ9Y4F5 1589 aaPredicted RBP18.39■□□□□ 0.54
SRRD-201ENST00000215917 NAP1L2Q9ULW6 460 aaPredicted RBP18.39■□□□□ 0.53
SRRD-201ENST00000215917 RGPD8O14715 1765 aaPredicted RBP18.39■□□□□ 0.53
SRRD-201ENST00000215917 SMC5Q8IY18 1101 aa18.38■□□□□ 0.53
SRRD-201ENST00000215917 ZBTB7BO15156 539 aaPredicted RBP18.37■□□□□ 0.53
SRRD-201ENST00000215917 ZNF853P0CG23 659 aa18.37■□□□□ 0.53
SRRD-201ENST00000215917 CHAF1AQ13111 956 aaPredicted RBP18.37■□□□□ 0.53
SRRD-201ENST00000215917 AKAP12Q02952 1782 aa18.37■□□□□ 0.53
SRRD-201ENST00000215917 API5Q9BZZ5 524 aaKnown RBP18.36■□□□□ 0.53
SRRD-201ENST00000215917 TSPYL4Q9UJ04 414 aa18.36■□□□□ 0.53
SRRD-201ENST00000215917 F6X3S4 739 aa18.36■□□□□ 0.53
SRRD-201ENST00000215917 SLC4A2P04920 1241 aa18.36■□□□□ 0.53
SRRD-201ENST00000215917 FLT4P35916 1363 aa18.36■□□□□ 0.53
SRRD-201ENST00000215917 XRCC6P12956 609 aaKnown RBP eCLIP18.36■□□□□ 0.53
SRRD-201ENST00000215917 HOXC9P31274 260 aa18.35■□□□□ 0.53
SRRD-201ENST00000215917 KCNJ4P48050 445 aa18.35■□□□□ 0.53
SRRD-201ENST00000215917 NUCB1Q02818 461 aa18.35■□□□□ 0.53
SRRD-201ENST00000215917 PROSER2Q86WR7 435 aaPredicted RBP18.35■□□□□ 0.53
SRRD-201ENST00000215917 SSH2Q76I76 1423 aa18.35■□□□□ 0.53
SRRD-201ENST00000215917 TRIM6-TRIM34B2RNG4 842 aa18.35■□□□□ 0.53
SRRD-201ENST00000215917 USP31Q70CQ4 1352 aa18.34■□□□□ 0.53
SRRD-201ENST00000215917 SMARCA5O60264 1052 aaPredicted RBP18.34■□□□□ 0.53
SRRD-201ENST00000215917 SBNO1A3KN83 1393 aa18.33■□□□□ 0.53
SRRD-201ENST00000215917 C16orf71Q8IYS4 520 aaPredicted RBP18.33■□□□□ 0.53
SRRD-201ENST00000215917 GOLGA6L4A6NEF3 574 aa18.33■□□□□ 0.53
SRRD-201ENST00000215917 CHMP4BQ9H444 224 aaKnown RBP18.33■□□□□ 0.52
SRRD-201ENST00000215917 ZHX1Q9UKY1 873 aaPredicted RBP18.33■□□□□ 0.52
SRRD-201ENST00000215917 SIRT2Q8IXJ6 389 aa18.31■□□□□ 0.52
SRRD-201ENST00000215917 DDX17Q92841 729 aaKnown RBP18.31■□□□□ 0.52
SRRD-201ENST00000215917 PRPF40AO75400 957 aaKnown RBP18.31■□□□□ 0.52
SRRD-201ENST00000215917 PEAK1Q9H792 1746 aa18.31■□□□□ 0.52
SRRD-201ENST00000215917 LRRC59Q96AG4 307 aaKnown RBP18.3■□□□□ 0.52
SRRD-201ENST00000215917 SETD1BQ9UPS6 1966 aaKnown RBP18.3■□□□□ 0.52
SRRD-201ENST00000215917 ZNF592Q92610 1267 aa18.3■□□□□ 0.52
SRRD-201ENST00000215917 ZNF428Q96B54 188 aa18.3■□□□□ 0.52
SRRD-201ENST00000215917 CHL1O00533 1208 aa18.3■□□□□ 0.52
SRRD-201ENST00000215917 HSPA2P54652 639 aa18.3■□□□□ 0.52
SRRD-201ENST00000215917 MEIS3Q99687 375 aa18.3■□□□□ 0.52
SRRD-201ENST00000215917 RBM42Q9BTD8 480 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms