RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 THUMPD2Q9BTF0 503 aaKnown RBP20.8■□□□□ 0.92
SNRPD3-201ENST00000215829 PLEKHG2Q9H7P9 1386 aa20.79■□□□□ 0.92
SNRPD3-201ENST00000215829 SPATA31A6Q5VVP1 1343 aa20.78■□□□□ 0.92
SNRPD3-201ENST00000215829 GNAT3A8MTJ3 354 aa20.78■□□□□ 0.92
SNRPD3-201ENST00000215829 TATP17735 454 aaPredicted RBP20.78■□□□□ 0.92
SNRPD3-201ENST00000215829 DCTN1Q14203 1278 aa20.78■□□□□ 0.92
SNRPD3-201ENST00000215829 RTF1Q92541 710 aaKnown RBP20.78■□□□□ 0.92
SNRPD3-201ENST00000215829 MAP3K5Q99683 1374 aa20.77■□□□□ 0.92
SNRPD3-201ENST00000215829 MCM10Q7L590 875 aa20.77■□□□□ 0.91
SNRPD3-201ENST00000215829 SUPT16HQ9Y5B9 1047 aaKnown RBP20.77■□□□□ 0.91
SNRPD3-201ENST00000215829 CRB1P82279 1406 aa20.77■□□□□ 0.91
SNRPD3-201ENST00000215829 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.76■□□□□ 0.914e-7■□□□□ 8.8
SNRPD3-201ENST00000215829 PLCH1Q4KWH8 1693 aa20.76■□□□□ 0.91
SNRPD3-201ENST00000215829 MEGF6O75095 1541 aa20.76■□□□□ 0.91
SNRPD3-201ENST00000215829 ZNF530Q6P9A1 599 aaPredicted RBP20.75■□□□□ 0.91
SNRPD3-201ENST00000215829 IFT57Q9NWB7 429 aa20.75■□□□□ 0.91
SNRPD3-201ENST00000215829 ZNF853P0CG23 659 aa20.74■□□□□ 0.91
SNRPD3-201ENST00000215829 AKAP4Q5JQC9 854 aa20.74■□□□□ 0.91
SNRPD3-201ENST00000215829 RCAN3Q9UKA8 241 aa20.74■□□□□ 0.91
SNRPD3-201ENST00000215829 GNAI1P63096 354 aa20.74■□□□□ 0.91
SNRPD3-201ENST00000215829 CFAP44Q96MT7 982 aa20.74■□□□□ 0.91
SNRPD3-201ENST00000215829 SPG7Q9UQ90 795 aa20.74■□□□□ 0.91
SNRPD3-201ENST00000215829 FANCIQ9NVI1 1328 aa20.74■□□□□ 0.91
SNRPD3-201ENST00000215829 TSR2Q969E8 191 aaKnown RBP20.73■□□□□ 0.91
SNRPD3-201ENST00000215829 C1orf141Q5JVX7 400 aa20.72■□□□□ 0.91
SNRPD3-201ENST00000215829 LAS1LQ9Y4W2 734 aaKnown RBP20.72■□□□□ 0.91
SNRPD3-201ENST00000215829 SLIT2O94813 1529 aa20.72■□□□□ 0.91
SNRPD3-201ENST00000215829 NWD2Q9ULI1 1742 aa20.72■□□□□ 0.91
SNRPD3-201ENST00000215829 IL17REQ8NFR9 667 aa20.72■□□□□ 0.91
SNRPD3-201ENST00000215829 NRAPQ86VF7 1730 aa20.71■□□□□ 0.91
SNRPD3-201ENST00000215829 IL2RBP14784 551 aa20.71■□□□□ 0.91
SNRPD3-201ENST00000215829 OVOS2A0A0G2JMS6 1433 aa20.71■□□□□ 0.91
SNRPD3-201ENST00000215829 PARP4Q9UKK3 1724 aaKnown RBP20.7■□□□□ 0.9
SNRPD3-201ENST00000215829 PKD1L3Q7Z443 1732 aa20.7■□□□□ 0.9
SNRPD3-201ENST00000215829 USP35Q9P2H5 1018 aa20.69■□□□□ 0.9
SNRPD3-201ENST00000215829 LRP6O75581 1613 aa20.69■□□□□ 0.9
SNRPD3-201ENST00000215829 CHL1O00533 1208 aa20.69■□□□□ 0.9
SNRPD3-201ENST00000215829 NGLY1Q96IV0 654 aa20.69■□□□□ 0.9
SNRPD3-201ENST00000215829 C8orf37Q96NL8 207 aa20.69■□□□□ 0.9
SNRPD3-201ENST00000215829 MBIPQ9NS73 344 aa20.69■□□□□ 0.9
SNRPD3-201ENST00000215829 CEMIPQ8WUJ3 1361 aa20.68■□□□□ 0.9
SNRPD3-201ENST00000215829 RNF123Q5XPI4 1314 aa20.67■□□□□ 0.9
SNRPD3-201ENST00000215829 EXOSC9Q06265 439 aaKnown RBP20.67■□□□□ 0.9
SNRPD3-201ENST00000215829 IFNL2Q8IZJ0 200 aa20.67■□□□□ 0.9
SNRPD3-201ENST00000215829 ZCRB1Q8TBF4 217 aaKnown RBP20.67■□□□□ 0.9
SNRPD3-201ENST00000215829 LGR6Q9HBX8 967 aa20.67■□□□□ 0.9
SNRPD3-201ENST00000215829 LRRC37A3O60309 1634 aa20.67■□□□□ 0.9
SNRPD3-201ENST00000215829 PHKG2P15735 406 aa20.67■□□□□ 0.9
SNRPD3-201ENST00000215829 MPRIPQ6WCQ1 1025 aa20.67■□□□□ 0.9
SNRPD3-201ENST00000215829 FNBP4Q8N3X1 1017 aaPredicted RBP20.67■□□□□ 0.9
SNRPD3-201ENST00000215829 GTF3C3Q9Y5Q9 886 aa20.67■□□□□ 0.9
SNRPD3-201ENST00000215829 CT47B1P0C2W7 299 aaPredicted RBP20.66■□□□□ 0.9
SNRPD3-201ENST00000215829 UNC5CLQ8IV45 518 aa20.66■□□□□ 0.9
SNRPD3-201ENST00000215829 SPATA31A1Q5TZJ5 1347 aa20.65■□□□□ 0.9
SNRPD3-201ENST00000215829 RNMTO43148 476 aaKnown RBP20.65■□□□□ 0.9
SNRPD3-201ENST00000215829 CYP27B1O15528 508 aa20.64■□□□□ 0.9
SNRPD3-201ENST00000215829 TAF7Q15545 349 aaPredicted RBP20.64■□□□□ 0.9
SNRPD3-201ENST00000215829 BABAM1Q9NWV8 329 aa20.64■□□□□ 0.9
SNRPD3-201ENST00000215829 THRAP3Q9Y2W1 955 aaKnown RBP20.64■□□□□ 0.9
SNRPD3-201ENST00000215829 BCL9LQ86UU0 1499 aa20.64■□□□□ 0.89
SNRPD3-201ENST00000215829 SPATA31A5Q5VU36 1347 aa20.63■□□□□ 0.89
SNRPD3-201ENST00000215829 SPATA31A7Q8IWB4 1347 aa20.63■□□□□ 0.89
SNRPD3-201ENST00000215829 PCDH11XQ9BZA7 1347 aa20.63■□□□□ 0.89
SNRPD3-201ENST00000215829 PCDH11YQ9BZA8 1340 aa20.63■□□□□ 0.89
SNRPD3-201ENST00000215829 DISP2A7MBM2 1401 aa20.63■□□□□ 0.89
SNRPD3-201ENST00000215829 ADAMTS7Q9UKP4 1686 aa20.63■□□□□ 0.89
SNRPD3-201ENST00000215829 VIRMAQ69YN4 1812 aaKnown RBP20.63■□□□□ 0.89
SNRPD3-201ENST00000215829 NEFLP07196 543 aa20.62■□□□□ 0.89
SNRPD3-201ENST00000215829 HSP90AB1P08238 724 aaKnown RBP20.62■□□□□ 0.89
SNRPD3-201ENST00000215829 MEX3CQ5U5Q3 659 aaKnown RBP20.62■□□□□ 0.89
SNRPD3-201ENST00000215829 TSPYL4Q9UJ04 414 aa20.62■□□□□ 0.89
SNRPD3-201ENST00000215829 MIS18AQ9NYP9 233 aa20.62■□□□□ 0.89
SNRPD3-201ENST00000215829 TEFQ10587 303 aa20.61■□□□□ 0.89
SNRPD3-201ENST00000215829 DCAF5Q96JK2 942 aa20.61■□□□□ 0.89
SNRPD3-201ENST00000215829 CDCA7Q9BWT1 371 aaPredicted RBP20.61■□□□□ 0.89
SNRPD3-201ENST00000215829 RARSP54136 660 aaKnown RBP20.6■□□□□ 0.89
SNRPD3-201ENST00000215829 RRP1P56182 461 aaKnown RBP20.6■□□□□ 0.89
SNRPD3-201ENST00000215829 VPS72Q15906 364 aa20.6■□□□□ 0.89
SNRPD3-201ENST00000215829 SCN11AQ9UI33 1791 aa20.6■□□□□ 0.89
SNRPD3-201ENST00000215829 USP21Q9UK80 565 aa20.59■□□□□ 0.89
SNRPD3-201ENST00000215829 CCDC9Q9Y3X0 531 aaKnown RBP20.59■□□□□ 0.89
SNRPD3-201ENST00000215829 KDM6AO15550 1401 aaPredicted RBP20.59■□□□□ 0.89
SNRPD3-201ENST00000215829 WNK3Q9BYP7 1800 aa20.59■□□□□ 0.89
SNRPD3-201ENST00000215829 SHANK3Q9BYB0 1731 aa20.59■□□□□ 0.89
SNRPD3-201ENST00000215829 NKX1-1Q15270 411 aaPredicted RBP20.59■□□□□ 0.89
SNRPD3-201ENST00000215829 BARGINQ6ZT62 677 aa20.59■□□□□ 0.89
SNRPD3-201ENST00000215829 VAMP4O75379 141 aa20.58■□□□□ 0.89
SNRPD3-201ENST00000215829 TSPYL6Q8N831 410 aa20.58■□□□□ 0.89
SNRPD3-201ENST00000215829 C8orf58Q8NAV2 365 aa20.58■□□□□ 0.89
SNRPD3-201ENST00000215829 DDX54Q8TDD1 881 aaKnown RBP20.58■□□□□ 0.89
SNRPD3-201ENST00000215829 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.57■□□□□ 0.88
SNRPD3-201ENST00000215829 BCAR3O75815 825 aa20.57■□□□□ 0.88
SNRPD3-201ENST00000215829 ZNF428Q96B54 188 aa20.57■□□□□ 0.88
SNRPD3-201ENST00000215829 EXOC5O00471 708 aa20.57■□□□□ 0.88
SNRPD3-201ENST00000215829 FKBP8Q14318 412 aa20.57■□□□□ 0.88
SNRPD3-201ENST00000215829 TWISTNBQ3B726 338 aaPredicted RBP20.57■□□□□ 0.88
SNRPD3-201ENST00000215829 SLC52A2Q9HAB3 445 aa20.56■□□□□ 0.88
SNRPD3-201ENST00000215829 SIPA1L3O60292 1781 aaPredicted RBP20.56■□□□□ 0.88
SNRPD3-201ENST00000215829 BTBD11A6QL63 1104 aa20.55■□□□□ 0.88
SNRPD3-201ENST00000215829 ELL2O00472 640 aaPredicted RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms