RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 TOM1L2Q6ZVM7 507 aa28.68■■■□□ 2.18
HOXC8-201ENST00000040584 THUMPD2Q9BTF0 503 aaKnown RBP28.68■■■□□ 2.18
HOXC8-201ENST00000040584 LMOD3Q0VAK6 560 aa28.66■■■□□ 2.18
HOXC8-201ENST00000040584 LARP1Q6PKG0 1096 aaKnown RBP28.66■■■□□ 2.18
HOXC8-201ENST00000040584 DCTN1Q14203 1278 aa28.66■■■□□ 2.18
HOXC8-201ENST00000040584 RNF123Q5XPI4 1314 aa28.65■■■□□ 2.18
HOXC8-201ENST00000040584 RAPGEF4Q8WZA2 1011 aa28.63■■■□□ 2.17
HOXC8-201ENST00000040584 PLEKHO1Q53GL0 409 aaPredicted RBP28.62■■■□□ 2.17
HOXC8-201ENST00000040584 MCM10Q7L590 875 aa28.61■■■□□ 2.17
HOXC8-201ENST00000040584 CARD10Q9BWT7 1032 aa28.61■■■□□ 2.17
HOXC8-201ENST00000040584 IL16Q14005 1332 aa28.6■■■□□ 2.17
HOXC8-201ENST00000040584 AMOTQ4VCS5 1084 aa28.6■■■□□ 2.17
HOXC8-201ENST00000040584 TATP17735 454 aaPredicted RBP28.59■■■□□ 2.17
HOXC8-201ENST00000040584 MEGF6O75095 1541 aa28.59■■■□□ 2.17
HOXC8-201ENST00000040584 GNAT3A8MTJ3 354 aa28.59■■■□□ 2.17
HOXC8-201ENST00000040584 RTF1Q92541 710 aaKnown RBP28.59■■■□□ 2.17
HOXC8-201ENST00000040584 SPATA31A6Q5VVP1 1343 aa28.58■■■□□ 2.17
HOXC8-201ENST00000040584 MYH16Q9H6N6 1097 aa28.58■■■□□ 2.17
HOXC8-201ENST00000040584 PLCH1Q4KWH8 1693 aa28.58■■■□□ 2.17
HOXC8-201ENST00000040584 CALD1Q05682 793 aaKnown RBP28.57■■■□□ 2.16
HOXC8-201ENST00000040584 ZNF530Q6P9A1 599 aaPredicted RBP28.57■■■□□ 2.16
HOXC8-201ENST00000040584 CRB1P82279 1406 aa28.57■■■□□ 2.16
HOXC8-201ENST00000040584 USP35Q9P2H5 1018 aa28.57■■■□□ 2.16
HOXC8-201ENST00000040584 LAS1LQ9Y4W2 734 aaKnown RBP28.57■■■□□ 2.16
HOXC8-201ENST00000040584 MAP3K5Q99683 1374 aa28.56■■■□□ 2.16
HOXC8-201ENST00000040584 TSR2Q969E8 191 aaKnown RBP28.56■■■□□ 2.16
HOXC8-201ENST00000040584 ANP32EQ9BTT0 268 aa28.55■■■□□ 2.16
HOXC8-201ENST00000040584 HTATSF1O43719 755 aaKnown RBP28.55■■■□□ 2.16
HOXC8-201ENST00000040584 RCAN3Q9UKA8 241 aa28.55■■■□□ 2.16
HOXC8-201ENST00000040584 FANCIQ9NVI1 1328 aa28.54■■■□□ 2.16
HOXC8-201ENST00000040584 LRP6O75581 1613 aa28.53■■■□□ 2.16
HOXC8-201ENST00000040584 AKAP4Q5JQC9 854 aa28.53■■■□□ 2.16
HOXC8-201ENST00000040584 C8orf37Q96NL8 207 aa28.53■■■□□ 2.16
HOXC8-201ENST00000040584 IL17REQ8NFR9 667 aa28.52■■■□□ 2.16
HOXC8-201ENST00000040584 IFT57Q9NWB7 429 aa28.52■■■□□ 2.16
HOXC8-201ENST00000040584 C1orf141Q5JVX7 400 aa28.51■■■□□ 2.15
HOXC8-201ENST00000040584 SPG7Q9UQ90 795 aa28.51■■■□□ 2.15
HOXC8-201ENST00000040584 SLIT2O94813 1529 aa28.51■■■□□ 2.15
HOXC8-201ENST00000040584 ZNF853P0CG23 659 aa28.51■■■□□ 2.15
HOXC8-201ENST00000040584 NGLY1Q96IV0 654 aa28.51■■■□□ 2.15
HOXC8-201ENST00000040584 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.51■■■□□ 2.15
HOXC8-201ENST00000040584 IL2RBP14784 551 aa28.5■■■□□ 2.15
HOXC8-201ENST00000040584 GNAI1P63096 354 aa28.5■■■□□ 2.15
HOXC8-201ENST00000040584 CFAP44Q96MT7 982 aa28.5■■■□□ 2.15
HOXC8-201ENST00000040584 NRAPQ86VF7 1730 aa28.5■■■□□ 2.15
HOXC8-201ENST00000040584 OVOS2A0A0G2JMS6 1433 aa28.49■■■□□ 2.15
HOXC8-201ENST00000040584 PLEKHG2Q9H7P9 1386 aa28.48■■■□□ 2.15
HOXC8-201ENST00000040584 NWD2Q9ULI1 1742 aa28.47■■■□□ 2.15
HOXC8-201ENST00000040584 MPRIPQ6WCQ1 1025 aa28.47■■■□□ 2.15
HOXC8-201ENST00000040584 LGR6Q9HBX8 967 aa28.47■■■□□ 2.15
HOXC8-201ENST00000040584 MBIPQ9NS73 344 aa28.47■■■□□ 2.15
HOXC8-201ENST00000040584 EXOSC9Q06265 439 aaKnown RBP28.46■■■□□ 2.15
HOXC8-201ENST00000040584 PARP4Q9UKK3 1724 aaKnown RBP28.46■■■□□ 2.15
HOXC8-201ENST00000040584 PKD1L3Q7Z443 1732 aa28.45■■■□□ 2.15
HOXC8-201ENST00000040584 PHKG2P15735 406 aa28.44■■■□□ 2.14
HOXC8-201ENST00000040584 ZCRB1Q8TBF4 217 aaKnown RBP28.44■■■□□ 2.14
HOXC8-201ENST00000040584 MEX3CQ5U5Q3 659 aaKnown RBP28.44■■■□□ 2.14
HOXC8-201ENST00000040584 B4GALNT3Q6L9W6 998 aa28.44■■■□□ 2.14
HOXC8-201ENST00000040584 UNC5CLQ8IV45 518 aa28.44■■■□□ 2.14
HOXC8-201ENST00000040584 CEMIPQ8WUJ3 1361 aa28.43■■■□□ 2.14
HOXC8-201ENST00000040584 CHL1O00533 1208 aa28.43■■■□□ 2.14
HOXC8-201ENST00000040584 CYP27B1O15528 508 aa28.43■■■□□ 2.14
HOXC8-201ENST00000040584 IFNL2Q8IZJ0 200 aa28.43■■■□□ 2.14
HOXC8-201ENST00000040584 MIS18AQ9NYP9 233 aa28.43■■■□□ 2.14
HOXC8-201ENST00000040584 LRRC37A3O60309 1634 aa28.43■■■□□ 2.14
HOXC8-201ENST00000040584 SPATA31A1Q5TZJ5 1347 aa28.42■■■□□ 2.14
HOXC8-201ENST00000040584 FNBP4Q8N3X1 1017 aaPredicted RBP28.42■■■□□ 2.14
HOXC8-201ENST00000040584 RNMTO43148 476 aaKnown RBP28.42■■■□□ 2.14
HOXC8-201ENST00000040584 BCL9LQ86UU0 1499 aa28.41■■■□□ 2.14
HOXC8-201ENST00000040584 CCDC9Q9Y3X0 531 aaKnown RBP28.41■■■□□ 2.14
HOXC8-201ENST00000040584 SPATA31A5Q5VU36 1347 aa28.4■■■□□ 2.14
HOXC8-201ENST00000040584 SPATA31A7Q8IWB4 1347 aa28.4■■■□□ 2.14
HOXC8-201ENST00000040584 DISP2A7MBM2 1401 aa28.39■■■□□ 2.14
HOXC8-201ENST00000040584 TAF7Q15545 349 aaPredicted RBP28.38■■■□□ 2.13
HOXC8-201ENST00000040584 TSPYL4Q9UJ04 414 aa28.38■■■□□ 2.13
HOXC8-201ENST00000040584 PCDH11XQ9BZA7 1347 aa28.38■■■□□ 2.13
HOXC8-201ENST00000040584 PCDH11YQ9BZA8 1340 aa28.38■■■□□ 2.13
HOXC8-201ENST00000040584 RRP1P56182 461 aaKnown RBP28.38■■■□□ 2.13
HOXC8-201ENST00000040584 CT47B1P0C2W7 299 aaPredicted RBP28.37■■■□□ 2.13
HOXC8-201ENST00000040584 DDX54Q8TDD1 881 aaKnown RBP28.37■■■□□ 2.13
HOXC8-201ENST00000040584 USP21Q9UK80 565 aa28.37■■■□□ 2.13
HOXC8-201ENST00000040584 TEFQ10587 303 aa28.36■■■□□ 2.13
HOXC8-201ENST00000040584 THRAP3Q9Y2W1 955 aaKnown RBP28.36■■■□□ 2.13
HOXC8-201ENST00000040584 KDM6AO15550 1401 aaPredicted RBP28.36■■■□□ 2.13
HOXC8-201ENST00000040584 VIRMAQ69YN4 1812 aaKnown RBP28.35■■■□□ 2.13
HOXC8-201ENST00000040584 CCDC136Q96JN2 1154 aa28.35■■■□□ 2.13
HOXC8-201ENST00000040584 VPS72Q15906 364 aa28.34■■■□□ 2.13
HOXC8-201ENST00000040584 TSPYL6Q8N831 410 aa28.34■■■□□ 2.13
HOXC8-201ENST00000040584 BCAR3O75815 825 aa28.34■■■□□ 2.13
HOXC8-201ENST00000040584 HSP90AB1P08238 724 aaKnown RBP28.34■■■□□ 2.13
HOXC8-201ENST00000040584 C8orf58Q8NAV2 365 aa28.34■■■□□ 2.13
HOXC8-201ENST00000040584 DCAF5Q96JK2 942 aa28.34■■■□□ 2.13
HOXC8-201ENST00000040584 ADAMTS7Q9UKP4 1686 aa28.33■■■□□ 2.13
HOXC8-201ENST00000040584 SHANK3Q9BYB0 1731 aa28.33■■■□□ 2.13
HOXC8-201ENST00000040584 ELL2O00472 640 aaPredicted RBP28.33■■■□□ 2.13
HOXC8-201ENST00000040584 RARSP54136 660 aaKnown RBP28.33■■■□□ 2.13
HOXC8-201ENST00000040584 KRT24Q2M2I5 525 aa28.32■■■□□ 2.12
HOXC8-201ENST00000040584 WNK3Q9BYP7 1800 aa28.31■■■□□ 2.12
HOXC8-201ENST00000040584 AFF2P51816 1311 aa28.31■■■□□ 2.12
HOXC8-201ENST00000040584 BABAM1Q9NWV8 329 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms