RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 NBPF4Q96M43 638 aa22.13■■□□□ 1.13
ERCC1-201ENST00000013807 MAP2P11137 1827 aaKnown RBP22.13■■□□□ 1.13
ERCC1-201ENST00000013807 ANKRD26Q9UPS8 1709 aa22.12■■□□□ 1.13
ERCC1-201ENST00000013807 SLC27A3Q5K4L6 730 aa22.12■■□□□ 1.13
ERCC1-201ENST00000013807 FLT4P35916 1363 aa22.12■■□□□ 1.13
ERCC1-201ENST00000013807 SGIP1Q9BQI5 828 aa22.11■■□□□ 1.13
ERCC1-201ENST00000013807 LRRC4BQ9NT99 713 aa22.11■■□□□ 1.13
ERCC1-201ENST00000013807 COL24A1Q17RW2 1714 aa22.11■■□□□ 1.13
ERCC1-201ENST00000013807 ZBTB7AO95365 584 aa22.1■■□□□ 1.13
ERCC1-201ENST00000013807 SMG6Q86US8 1419 aaKnown RBP22.1■■□□□ 1.13
ERCC1-201ENST00000013807 MTFR1LQ9H019 292 aa22.1■■□□□ 1.13
ERCC1-201ENST00000013807 HSP90AB2PQ58FF8 381 aa22.09■■□□□ 1.13
ERCC1-201ENST00000013807 NSD2O96028 1365 aa22.09■■□□□ 1.13
ERCC1-201ENST00000013807 NSD3Q9BZ95 1437 aa22.07■■□□□ 1.12
ERCC1-201ENST00000013807 PRIM1P49642 420 aaKnown RBP22.07■■□□□ 1.12
ERCC1-201ENST00000013807 AKT1S1Q96B36 256 aa22.07■■□□□ 1.12
ERCC1-201ENST00000013807 NCAPD2Q15021 1401 aa22.06■■□□□ 1.12
ERCC1-201ENST00000013807 TUBGCP6Q96RT7 1819 aa22.06■■□□□ 1.12
ERCC1-201ENST00000013807 ZNF827Q17R98 1081 aa22.05■■□□□ 1.12
ERCC1-201ENST00000013807 RAPGEF4Q8WZA2 1011 aa22.05■■□□□ 1.12
ERCC1-201ENST00000013807 ATF5Q9Y2D1 282 aaPredicted RBP22.05■■□□□ 1.12
ERCC1-201ENST00000013807 PKD1L3Q7Z443 1732 aa22.04■■□□□ 1.12
ERCC1-201ENST00000013807 SLC16A10Q8TF71 515 aa22.04■■□□□ 1.12
ERCC1-201ENST00000013807 PCGF6Q9BYE7 350 aa22.04■■□□□ 1.12
ERCC1-201ENST00000013807 TATP17735 454 aaPredicted RBP22.03■■□□□ 1.12
ERCC1-201ENST00000013807 ITGB4P16144 1822 aa22.03■■□□□ 1.12
ERCC1-201ENST00000013807 USHBP1Q8N6Y0 703 aa22.02■■□□□ 1.12
ERCC1-201ENST00000013807 WASHC2AQ641Q2 1341 aa22.02■■□□□ 1.12
ERCC1-201ENST00000013807 DCAF8L1A6NGE4 600 aa22.01■■□□□ 1.11
ERCC1-201ENST00000013807 SYTL4Q96C24 671 aaPredicted RBP22.01■■□□□ 1.11
ERCC1-201ENST00000013807 EMILIN1Q9Y6C2 1016 aa22.01■■□□□ 1.11
ERCC1-201ENST00000013807 MAP3K5Q99683 1374 aa22■■□□□ 1.11
ERCC1-201ENST00000013807 SYT17Q9BSW7 474 aa22■■□□□ 1.11
ERCC1-201ENST00000013807 TAF1LQ8IZX4 1826 aa22■■□□□ 1.11
ERCC1-201ENST00000013807 PCDH11XQ9BZA7 1347 aa22■■□□□ 1.11
ERCC1-201ENST00000013807 PCDH11YQ9BZA8 1340 aa22■■□□□ 1.11
ERCC1-201ENST00000013807 CHD4Q14839 1912 aa21.98■■□□□ 1.11
ERCC1-201ENST00000013807 FHDC1Q9C0D6 1143 aaPredicted RBP21.98■■□□□ 1.11
ERCC1-201ENST00000013807 PNPLA7Q6ZV29 1317 aa21.98■■□□□ 1.11
ERCC1-201ENST00000013807 UTRNP46939 3433 aa21.97■■□□□ 1.11
ERCC1-201ENST00000013807 TOGARAM1Q9Y4F4 1720 aa21.97■■□□□ 1.11
ERCC1-201ENST00000013807 CYP27B1O15528 508 aa21.97■■□□□ 1.11
ERCC1-201ENST00000013807 HMGB2P26583 209 aaKnown RBP21.97■■□□□ 1.11
ERCC1-201ENST00000013807 EIF4G2P78344 907 aaKnown RBP eCLIP21.97■■□□□ 1.11
ERCC1-201ENST00000013807 ARXQ96QS3 562 aa21.97■■□□□ 1.11
ERCC1-201ENST00000013807 YY1P25490 414 aa21.96■■□□□ 1.11
ERCC1-201ENST00000013807 NKX1-1Q15270 411 aaPredicted RBP21.96■■□□□ 1.11
ERCC1-201ENST00000013807 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.96■■□□□ 1.11
ERCC1-201ENST00000013807 POLKQ9UBT6 870 aa21.96■■□□□ 1.11
ERCC1-201ENST00000013807 C5P01031 1676 aa21.95■■□□□ 1.1
ERCC1-201ENST00000013807 PLEKHG2Q9H7P9 1386 aa21.95■■□□□ 1.1
ERCC1-201ENST00000013807 TFCP2L1Q9NZI6 479 aa21.94■■□□□ 1.1
ERCC1-201ENST00000013807 CCNL1Q9UK58 526 aaPredicted RBP21.94■■□□□ 1.1
ERCC1-201ENST00000013807 KCNQ4P56696 695 aa21.93■■□□□ 1.1
ERCC1-201ENST00000013807 HSPA5P11021 654 aaKnown RBP21.92■■□□□ 1.1
ERCC1-201ENST00000013807 EYA1Q99502 592 aa21.92■■□□□ 1.1
ERCC1-201ENST00000013807 PPM1GO15355 546 aaPredicted RBP21.9■■□□□ 1.1
ERCC1-201ENST00000013807 SPG7Q9UQ90 795 aa21.9■■□□□ 1.1
ERCC1-201ENST00000013807 SMARCC1Q92922 1105 aaPredicted RBP21.88■■□□□ 1.09
ERCC1-201ENST00000013807 PALLDQ8WX93 1383 aa21.87■■□□□ 1.09
ERCC1-201ENST00000013807 POLD1P28340 1107 aa21.87■■□□□ 1.09
ERCC1-201ENST00000013807 MPRIPQ6WCQ1 1025 aa21.87■■□□□ 1.09
ERCC1-201ENST00000013807 PANK3Q9H999 370 aa21.87■■□□□ 1.09
ERCC1-201ENST00000013807 UBR3Q6ZT12 1888 aa21.86■■□□□ 1.09
ERCC1-201ENST00000013807 EIF4A2Q14240 407 aaKnown RBP21.86■■□□□ 1.09
ERCC1-201ENST00000013807 COL23A1Q86Y22 540 aaPredicted RBP21.86■■□□□ 1.09
ERCC1-201ENST00000013807 CCER1Q8TC90 406 aaPredicted RBP21.86■■□□□ 1.09
ERCC1-201ENST00000013807 C4BP0C0L5 1744 aa21.86■■□□□ 1.09
ERCC1-201ENST00000013807 FLAD1Q8NFF5 587 aa21.85■■□□□ 1.09
ERCC1-201ENST00000013807 PIGBQ92521 554 aa21.85■■□□□ 1.09
ERCC1-201ENST00000013807 IGSF1Q8N6C5 1336 aa21.83■■□□□ 1.09
ERCC1-201ENST00000013807 IFNL2Q8IZJ0 200 aa21.83■■□□□ 1.09
ERCC1-201ENST00000013807 POLR3GLQ9BT43 218 aa21.83■■□□□ 1.09
ERCC1-201ENST00000013807 GOLGB1Q14789 3259 aaKnown RBP21.82■■□□□ 1.08
ERCC1-201ENST00000013807 PHKG2P15735 406 aa21.82■■□□□ 1.08
ERCC1-201ENST00000013807 ZNF831Q5JPB2 1677 aa21.82■■□□□ 1.08
ERCC1-201ENST00000013807 TNNT2P45379 298 aaPredicted RBP21.79■■□□□ 1.08
ERCC1-201ENST00000013807 LOC102724428A0A0B4J2F2 783 aa21.77■■□□□ 1.08
ERCC1-201ENST00000013807 SIK1P57059 783 aa21.77■■□□□ 1.08
ERCC1-201ENST00000013807 TMOD3Q9NYL9 352 aa21.77■■□□□ 1.08
ERCC1-201ENST00000013807 ERVV-2B6SEH9 535 aa21.75■■□□□ 1.07
ERCC1-201ENST00000013807 MORC1Q86VD1 984 aa21.75■■□□□ 1.07
ERCC1-201ENST00000013807 ASAP1Q9ULH1 1129 aa21.75■■□□□ 1.07
ERCC1-201ENST00000013807 KNSTRNQ9Y448 316 aa21.75■■□□□ 1.07
ERCC1-201ENST00000013807 MSH5O43196 834 aa21.74■■□□□ 1.07
ERCC1-201ENST00000013807 HSP90AB1P08238 724 aaKnown RBP21.74■■□□□ 1.07
ERCC1-201ENST00000013807 ZNF784Q8NCA9 323 aaPredicted RBP21.74■■□□□ 1.07
ERCC1-201ENST00000013807 DCAF5Q96JK2 942 aa21.74■■□□□ 1.07
ERCC1-201ENST00000013807 ATG3Q9NT62 314 aa21.74■■□□□ 1.07
ERCC1-201ENST00000013807 SSFA2P28290 1259 aa21.73■■□□□ 1.07
ERCC1-201ENST00000013807 GPR162Q16538 588 aa21.73■■□□□ 1.07
ERCC1-201ENST00000013807 AMOTQ4VCS5 1084 aa21.73■■□□□ 1.07
ERCC1-201ENST00000013807 PLEKHO1Q53GL0 409 aaPredicted RBP21.73■■□□□ 1.07
ERCC1-201ENST00000013807 AMER1Q5JTC6 1135 aaPredicted RBP21.73■■□□□ 1.07
ERCC1-201ENST00000013807 AMIGO3Q86WK7 504 aa21.73■■□□□ 1.07
ERCC1-201ENST00000013807 NLGN2Q8NFZ4 835 aa21.73■■□□□ 1.07
ERCC1-201ENST00000013807 AK7Q96M32 723 aa21.73■■□□□ 1.07
ERCC1-201ENST00000013807 CD2APQ9Y5K6 639 aa21.73■■□□□ 1.07
ERCC1-201ENST00000013807 KDRP35968 1356 aa21.73■■□□□ 1.07
ERCC1-201ENST00000013807 LINC00116Q8NCU8 138 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms