RNA–Protein interactions for RNA: ENSMUST00000208255.1

Pcf11-205, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

BASIC

Gene Pcf11, Length 1,720 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-205ENSMUST00000208255 Tnrc6cQ3UHC0 1690 aaKnown RBP31.46■■■□□ 2.63
Pcf11-205ENSMUST00000208255 Kat6bQ8BRB7 1872 aa31.45■■■□□ 2.63
Pcf11-205ENSMUST00000208255 Fer1l6E0CZ42 1862 aa31.45■■■□□ 2.62
Pcf11-205ENSMUST00000208255 Cacna1sQ02789 1880 aa31.45■■■□□ 2.62
Pcf11-205ENSMUST00000208255 Fam50bQ9WTJ8 334 aa31.44■■■□□ 2.62
Pcf11-205ENSMUST00000208255 Adgrb1Q3UHD1 1582 aa31.44■■■□□ 2.62
Pcf11-205ENSMUST00000208255 Ttc21aQ8C0S4 1314 aa31.43■■■□□ 2.62
Pcf11-205ENSMUST00000208255 Ginm1Q91WR6 327 aa31.42■■■□□ 2.62
Pcf11-205ENSMUST00000208255 Ankrd50F7BE84 1390 aa31.4■■■□□ 2.62
Pcf11-205ENSMUST00000208255 Mst1rQ62190 1378 aa31.4■■■□□ 2.62
Pcf11-205ENSMUST00000208255 Vps33bP59016 617 aa31.39■■■□□ 2.62
Pcf11-205ENSMUST00000208255 Kcnh4A2A5F7 1018 aa31.37■■■□□ 2.61
Pcf11-205ENSMUST00000208255 Rtf1A2AQ19 715 aaKnown RBP31.36■■■□□ 2.61
Pcf11-205ENSMUST00000208255 Sgsm1Q8BPQ7 1093 aa31.36■■■□□ 2.61
Pcf11-205ENSMUST00000208255 Tnks1bp1P58871 1720 aa31.36■■■□□ 2.61
Pcf11-205ENSMUST00000208255 Ankrd23Q812A3 306 aa31.35■■■□□ 2.61
Pcf11-205ENSMUST00000208255 Ksr2Q3UVC0 959 aa31.35■■■□□ 2.61
Pcf11-205ENSMUST00000208255 Speer4bQ9D9F7 267 aa31.35■■■□□ 2.61
Pcf11-205ENSMUST00000208255 Nup153E9Q3G8 1462 aaKnown RBP31.34■■■□□ 2.61
Pcf11-205ENSMUST00000208255 Gm21680A0A0G2JGR8 267 aa31.32■■■□□ 2.61
Pcf11-205ENSMUST00000208255 Tns2Q8CGB6 1400 aa31.32■■■□□ 2.6
Pcf11-205ENSMUST00000208255 Sik1Q60670 779 aa31.32■■■□□ 2.6
Pcf11-205ENSMUST00000208255 Eif3bQ8JZQ9 803 aaKnown RBP31.32■■■□□ 2.6
Pcf11-205ENSMUST00000208255 Aox2Q5SGK3 1345 aa31.32■■■□□ 2.6
Pcf11-205ENSMUST00000208255 Ltbp1Q8CG19 1712 aa31.31■■■□□ 2.6
Pcf11-205ENSMUST00000208255 Elp1Q7TT37 1333 aaKnown RBP31.31■■■□□ 2.6
Pcf11-205ENSMUST00000208255 Mast2Q60592 1734 aa31.3■■■□□ 2.6
Pcf11-205ENSMUST00000208255 Myo5bP21271 1818 aa31.3■■■□□ 2.6
Pcf11-205ENSMUST00000208255 Exoc5Q3TPX4 708 aa31.3■■■□□ 2.6
Pcf11-205ENSMUST00000208255 Phkg2Q9DB30 406 aa31.29■■■□□ 2.6
Pcf11-205ENSMUST00000208255 Ccar1Q8CH18 1146 aaKnown RBP31.29■■■□□ 2.6
Pcf11-205ENSMUST00000208255 Rbm25B2RY56 838 aaKnown RBP31.28■■■□□ 2.6
Pcf11-205ENSMUST00000208255 Calr4Q3TQS0 420 aa31.28■■■□□ 2.6
Pcf11-205ENSMUST00000208255 Gnai1B2RSH2 354 aa31.27■■■□□ 2.6
Pcf11-205ENSMUST00000208255 Cdc37l1Q9CZP7 335 aa31.27■■■□□ 2.6
Pcf11-205ENSMUST00000208255 Gnai3Q9DC51 354 aa31.27■■■□□ 2.6
Pcf11-205ENSMUST00000208255 CastP51125 788 aa31.27■■■□□ 2.6
Pcf11-205ENSMUST00000208255 Ddb1Q3U1J4 1140 aaKnown RBP31.27■■■□□ 2.6
Pcf11-205ENSMUST00000208255 Rwdd1Q9CQK7 243 aa31.27■■■□□ 2.6
Pcf11-205ENSMUST00000208255 Pdzd9Q9D9M4 266 aa31.27■■■□□ 2.6
Pcf11-205ENSMUST00000208255 Chmp7Q8R1T1 451 aa31.26■■■□□ 2.59
Pcf11-205ENSMUST00000208255 Nwd2Q6P5U7 1742 aa31.25■■■□□ 2.59
Pcf11-205ENSMUST00000208255 Snap23O09044 210 aa31.24■■■□□ 2.59
Pcf11-205ENSMUST00000208255 Abcc12Q80WJ6 1366 aa31.24■■■□□ 2.59
Pcf11-205ENSMUST00000208255 Sos1Q62245 1319 aa31.23■■■□□ 2.59
Pcf11-205ENSMUST00000208255 Ssfa2Q922B9 1252 aa31.23■■■□□ 2.59
Pcf11-205ENSMUST00000208255 NudcO35685 332 aaKnown RBP31.21■■■□□ 2.59
Pcf11-205ENSMUST00000208255 Larp1Q6ZQ58 1072 aaKnown RBP31.21■■■□□ 2.59
Pcf11-205ENSMUST00000208255 Gm21663A0A0G2JE01 267 aa31.18■■■□□ 2.58
Pcf11-205ENSMUST00000208255 Gm7361D3Z6R1 267 aa31.18■■■□□ 2.58
Pcf11-205ENSMUST00000208255 5031410I06RikE9Q4E0 267 aa31.18■■■□□ 2.58
Pcf11-205ENSMUST00000208255 Gm1979E9QAN3 267 aa31.18■■■□□ 2.58
Pcf11-205ENSMUST00000208255 Gm5862K7N5V5 267 aa31.18■■■□□ 2.58
Pcf11-205ENSMUST00000208255 Gm10220K7N660 267 aa31.18■■■□□ 2.58
Pcf11-205ENSMUST00000208255 Slc5a1Q8C3K6 665 aa31.18■■■□□ 2.58
Pcf11-205ENSMUST00000208255 Asic4Q7TNS7 539 aa31.18■■■□□ 2.58
Pcf11-205ENSMUST00000208255 Taok3Q8BYC6 898 aa31.15■■■□□ 2.58
Pcf11-205ENSMUST00000208255 Klhdc4Q921I2 584 aa31.15■■■□□ 2.58
Pcf11-205ENSMUST00000208255 Ccdc171E9Q1U1 1324 aa31.13■■■□□ 2.57
Pcf11-205ENSMUST00000208255 4930523C07RikE9Q2T4 99 aa31.12■■■□□ 2.57
Pcf11-205ENSMUST00000208255 Usp16Q99LG0 825 aa31.12■■■□□ 2.57
Pcf11-205ENSMUST00000208255 Vamp4O70480 141 aa31.11■■■□□ 2.57
Pcf11-205ENSMUST00000208255 Prim1P20664 417 aa31.11■■■□□ 2.57
Pcf11-205ENSMUST00000208255 Csrnp3P59055 597 aa31.11■■■□□ 2.57
Pcf11-205ENSMUST00000208255 Trim26Q99PN3 545 aa31.11■■■□□ 2.57
Pcf11-205ENSMUST00000208255 Ggnbp2Q5SV77 696 aa31.1■■■□□ 2.57
Pcf11-205ENSMUST00000208255 Polr3glQ8R0C0 218 aa31.09■■■□□ 2.57
Pcf11-205ENSMUST00000208255 Apbb1Q9QXJ1 710 aa31.09■■■□□ 2.57
Pcf11-205ENSMUST00000208255 PappaQ8R4K8 1624 aa31.08■■■□□ 2.57
Pcf11-205ENSMUST00000208255 Nkx2-3P97334 362 aa31.07■■■□□ 2.56
Pcf11-205ENSMUST00000208255 U2surpQ6NV83 1029 aaKnown RBP31.07■■■□□ 2.56
Pcf11-205ENSMUST00000208255 ApobrQ8VBT6 942 aa31.07■■■□□ 2.56
Pcf11-205ENSMUST00000208255 Ccdc60Q8C4J0 545 aa31.07■■■□□ 2.56
Pcf11-205ENSMUST00000208255 Btbd11Q6GQW0 1109 aa31.05■■■□□ 2.56
Pcf11-205ENSMUST00000208255 Ccdc155Q80VJ8 648 aa31.05■■■□□ 2.56
Pcf11-205ENSMUST00000208255 Ccnl1Q52KE7 532 aaKnown RBP31.04■■■□□ 2.56
Pcf11-205ENSMUST00000208255 Senp3Q9EP97 568 aaKnown RBP31.04■■■□□ 2.56
Pcf11-205ENSMUST00000208255 Igsf1Q7TQA1 1317 aa31.03■■■□□ 2.56
Pcf11-205ENSMUST00000208255 Ppp6r1Q7TSI3 856 aa31.03■■■□□ 2.56
Pcf11-205ENSMUST00000208255 Zcrb1Q9CZ96 217 aaKnown RBP31.03■■■□□ 2.56
Pcf11-205ENSMUST00000208255 Foxp4Q9DBY0 795 aaKnown RBP31.03■■■□□ 2.56
Pcf11-205ENSMUST00000208255 Ubr2Q6WKZ8 1755 aa31.02■■■□□ 2.56
Pcf11-205ENSMUST00000208255 Crb1Q8VHS2 1405 aa31■■■□□ 2.55
Pcf11-205ENSMUST00000208255 GakQ99KY4 1305 aa31■■■□□ 2.55
Pcf11-205ENSMUST00000208255 G3bp1P97855 465 aaKnown RBP31■■■□□ 2.55
Pcf11-205ENSMUST00000208255 Ints5Q8CHT3 1018 aa31■■■□□ 2.55
Pcf11-205ENSMUST00000208255 KarsQ99MN1 595 aaKnown RBP31■■■□□ 2.55
Pcf11-205ENSMUST00000208255 Trim58Q5NCC9 485 aa30.99■■■□□ 2.55
Pcf11-205ENSMUST00000208255 Mbd3Q9Z2D8 285 aaKnown RBP30.98■■■□□ 2.55
Pcf11-205ENSMUST00000208255 Dlg5E9Q9R9 1921 aa30.98■■■□□ 2.55
Pcf11-205ENSMUST00000208255 Msh6P54276 1358 aaKnown RBP30.98■■■□□ 2.55
Pcf11-205ENSMUST00000208255 Gm6268A2A3U9 297 aa30.97■■■□□ 2.55
Pcf11-205ENSMUST00000208255 Plekhm2Q80TQ5 1018 aa30.97■■■□□ 2.55
Pcf11-205ENSMUST00000208255 Ly75Q60767 1723 aa30.97■■■□□ 2.55
Pcf11-205ENSMUST00000208255 Cavin2Q63918 418 aaKnown RBP30.96■■■□□ 2.55
Pcf11-205ENSMUST00000208255 Nsd3Q6P2L6 1439 aa30.96■■■□□ 2.55
Pcf11-205ENSMUST00000208255 SafbD3YXK2 937 aaKnown RBP30.95■■■□□ 2.54
Pcf11-205ENSMUST00000208255 Sugp2Q8CH09 1067 aa30.95■■■□□ 2.54
Pcf11-205ENSMUST00000208255 Pank1Q8K4K6 548 aa30.94■■■□□ 2.54
Pcf11-205ENSMUST00000208255 Kcnh8P59111 1102 aa30.93■■■□□ 2.54
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms