RNA–Protein interactions for RNA: ENSMUST00000108909.8

Scn8a-204, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 11,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-204ENSMUST00000108909 Ptpdc1Q6NZK8 747 aa9.43□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Grpel1Q99LP6 217 aa9.43□□□□□ -0.9
Scn8a-204ENSMUST00000108909 ClasrpQ8CFC7 668 aa9.42□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Top1mtQ8R4U6 593 aa9.42□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Scaf1Q5U4C3 1256 aaKnown RBP9.42□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Luc7lQ9CYI4 371 aaKnown RBP9.42□□□□□ -0.9
Scn8a-204ENSMUST00000108909 ScaperF8VQ70 1398 aaKnown RBP9.42□□□□□ -0.9
Scn8a-204ENSMUST00000108909 TxlnbQ8VBT1 685 aa9.42□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Gas2l3Q3UWW6 683 aa9.42□□□□□ -0.9
Scn8a-204ENSMUST00000108909 ZwintQ9CQU5 252 aa9.42□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Mipol1Q9D9F8 279 aa9.42□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Ncoa1P70365 1447 aa9.42□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Bin1O08539 588 aaKnown RBP9.42□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Odf2lQ9D478 642 aa9.42□□□□□ -0.9
Scn8a-204ENSMUST00000108909 KdrP35918 1367 aa9.42□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Agtpbp1Q641K1 1218 aa9.42□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Ccdc93Q7TQK5 629 aa9.42□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Fam13aQ8BGI4 693 aa9.42□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Tspyl3Q3UYP3 334 aa9.41□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Tmx1Q8VBT0 278 aa9.41□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Gm21671G3UY31 267 aa9.41□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Pip4k2aO70172 405 aa9.41□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Fsd2Q8BZ52 692 aa9.41□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Myo18aQ9JMH9 2050 aaKnown RBP9.41□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Ttll5Q8CHB8 1328 aa9.41□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Zfp91Q62511 572 aa9.41□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Znf131Q8K3J5 619 aa9.41□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Sel1lQ9Z2G6 790 aa9.41□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Irgm2A0A140LIF8 407 aa9.41□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Cfap73J3QPZ5 306 aa9.41□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Dync1i1O88485 628 aa9.41□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Skor1Q8BX46 964 aa9.41□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Pms1Q8K119 917 aa9.41□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Dnajc2P54103 621 aaKnown RBP9.4□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Luzp1Q8R4U7 1068 aaKnown RBP9.4□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Ccdc66Q6NS45 935 aa9.4□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Erc1Q99MI1 1120 aa9.4□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Shroom4Q1W617 1475 aa9.4□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Ccdc191J3QQ27 883 aa9.4□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Trap1aP19473 224 aa9.4□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Gng11P61953 73 aa9.4□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Tshz3Q8CGV9 1081 aa9.4□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Gm45140A0A0N4SUM8 220 aa9.4□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Rufy2Q8R4C2 606 aa9.4□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Tubb6Q922F4 447 aa9.4□□□□□ -0.9
Scn8a-204ENSMUST00000108909 PrxO55103 1391 aa9.4□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Ccdc39Q9D5Y1 937 aa9.4□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Ktn1Q61595 1327 aaKnown RBP9.4□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Nsd2Q8BVE8 1365 aa9.4□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Smarcc1P97496 1104 aa9.4□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Snx13Q6PHS6 957 aa9.4□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Ppp1r18Q8BQ30 594 aa9.4□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Usp25P57080 1055 aa9.39□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Jade2Q6ZQF7 829 aa9.39□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Syt10Q9R0N4 523 aa9.39□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Ube2hP62257 183 aa9.39□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Cfap45Q9D9U9 551 aa9.39□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Map3k13Q1HKZ5 959 aa9.39□□□□□ -0.91
Scn8a-204ENSMUST00000108909 RalylQ8BTF8 293 aa9.39□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Trerf1Q8BXJ2 1205 aa9.39□□□□□ -0.91
Scn8a-204ENSMUST00000108909 PalmQ9Z0P4 383 aa9.39□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Cd109Q8R422 1442 aa9.39□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Asxl1P59598 1514 aa9.39□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Mcm6P97311 821 aa9.39□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Iqca1Q9CUL5 857 aa9.39□□□□□ -0.91
Scn8a-204ENSMUST00000108909 NinlQ6ZQ12 1394 aa9.39□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Zfp397Q7TNK4 527 aa9.39□□□□□ -0.91
Scn8a-204ENSMUST00000108909 4921504E06RikQ8CET2 560 aa9.39□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Tmc2Q8R4P4 888 aa9.39□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Arid3aQ62431 601 aa9.39□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Stx6Q9JKK1 255 aa9.39□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Gm7361D3Z6R1 267 aa9.39□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Ccdc178Q8CDV0 866 aa9.39□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Phlpp2Q8BXA7 1320 aa9.39□□□□□ -0.91
Scn8a-204ENSMUST00000108909 TbcaP48428 108 aaKnown RBP9.39□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Ddx19aQ61655 478 aaKnown RBP9.39□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Tex19.1Q99MV2 351 aa9.39□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Stxbp4Q9WV89 557 aa9.39□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Ncoa2Q61026 1462 aa9.39□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Bloc1s4Q8VED2 215 aa9.38□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Kif2aP28740 705 aa9.38□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Fkbp4P30416 458 aa9.38□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Spty2d1Q68FG3 682 aa9.38□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Abcf1Q6P542 837 aaKnown RBP9.38□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Adck5Q80V03 582 aa9.38□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Igbp1bQ9QZ29 343 aa9.38□□□□□ -0.91
Scn8a-204ENSMUST00000108909 FanciQ8K368 1330 aa9.38□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Tbc1d8Q9Z1A9 1134 aa9.38□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Nbr1P97432 988 aa9.38□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Fam177a1Q8BR63 207 aa9.38□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Brf1Q8CFK2 676 aa9.38□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Pds5bQ4VA53 1446 aaKnown RBP9.38□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Ranbp1P34022 203 aaKnown RBP9.38□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Ccdc158Q8CDI6 1109 aa9.38□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Fam76aQ922G2 307 aa9.38□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Wwc1Q5SXA9 1104 aa9.38□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Ppp4r3bQ922R5 820 aa9.38□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Gm1979E9QAN3 267 aa9.37□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Map2k1P31938 393 aa9.37□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Ano6Q6P9J9 911 aa9.37□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 38.8 ms