RNA–Protein interactions for RNA: ENSMUST00000107935.7

Shank1-202, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-202ENSMUST00000107935 Armc9Q9D2I5 817 aa17.54■□□□□ 0.4
Shank1-202ENSMUST00000107935 Pms1Q8K119 917 aa17.54■□□□□ 0.4
Shank1-202ENSMUST00000107935 MvpQ9EQK5 861 aa17.54■□□□□ 0.4
Shank1-202ENSMUST00000107935 Eif3j1Q3UGC7 261 aaKnown RBP17.54■□□□□ 0.4
Shank1-202ENSMUST00000107935 Eif3j2Q66JS6 263 aa17.54■□□□□ 0.4
Shank1-202ENSMUST00000107935 Lrrfip1Q3UZ39 729 aaKnown RBP17.54■□□□□ 0.4
Shank1-202ENSMUST00000107935 Ccdc186Q8C9S4 917 aa17.54■□□□□ 0.4
Shank1-202ENSMUST00000107935 SltmQ8CH25 1031 aaKnown RBP17.54■□□□□ 0.4
Shank1-202ENSMUST00000107935 Rhot2Q8JZN7 620 aa17.54■□□□□ 0.4
Shank1-202ENSMUST00000107935 Tex19.1Q99MV2 351 aa17.54■□□□□ 0.4
Shank1-202ENSMUST00000107935 CebpzP53569 1052 aaKnown RBP17.53■□□□□ 0.4
Shank1-202ENSMUST00000107935 Rnf34Q99KR6 376 aa17.53■□□□□ 0.4
Shank1-202ENSMUST00000107935 Gm21680A0A0G2JGR8 267 aa17.53■□□□□ 0.4
Shank1-202ENSMUST00000107935 Ptpdc1Q6NZK8 747 aa17.53■□□□□ 0.4
Shank1-202ENSMUST00000107935 Srgap3Q812A2 1099 aa17.53■□□□□ 0.4
Shank1-202ENSMUST00000107935 Calcoco1Q8CGU1 691 aa17.53■□□□□ 0.4
Shank1-202ENSMUST00000107935 Ddx19aQ61655 478 aaKnown RBP17.53■□□□□ 0.4
Shank1-202ENSMUST00000107935 Pof1bQ8K4L4 587 aa17.53■□□□□ 0.4
Shank1-202ENSMUST00000107935 Stxbp4Q9WV89 557 aa17.53■□□□□ 0.4
Shank1-202ENSMUST00000107935 Smc5Q8CG46 1101 aaKnown RBP17.53■□□□□ 0.4
Shank1-202ENSMUST00000107935 Ccdc12Q8R344 166 aaKnown RBP17.53■□□□□ 0.4
Shank1-202ENSMUST00000107935 Cep131Q62036 1060 aa17.53■□□□□ 0.4
Shank1-202ENSMUST00000107935 Tacc1Q6Y685 774 aa17.53■□□□□ 0.4
Shank1-202ENSMUST00000107935 Akap8Q9DBR0 687 aaKnown RBP17.53■□□□□ 0.4
Shank1-202ENSMUST00000107935 Gbp1Q01514 589 aa17.52■□□□□ 0.4
Shank1-202ENSMUST00000107935 Zscan20B2KFW1 1030 aa17.52■□□□□ 0.4
Shank1-202ENSMUST00000107935 4933428M09RikQ9D3X3 192 aa17.52■□□□□ 0.4
Shank1-202ENSMUST00000107935 Cux2P70298 1426 aa17.52■□□□□ 0.4
Shank1-202ENSMUST00000107935 Gm45140A0A0N4SUM8 220 aa17.52■□□□□ 0.39
Shank1-202ENSMUST00000107935 Trerf1Q8BXJ2 1205 aa17.52■□□□□ 0.39
Shank1-202ENSMUST00000107935 Smco2Q9DA21 347 aa17.52■□□□□ 0.39
Shank1-202ENSMUST00000107935 Cwc27Q3TKY6 469 aa17.52■□□□□ 0.39
Shank1-202ENSMUST00000107935 Gm21190A0A0G2JGJ6 266 aa17.51■□□□□ 0.39
Shank1-202ENSMUST00000107935 Igbp1bQ9QZ29 343 aa17.51■□□□□ 0.39
Shank1-202ENSMUST00000107935 Wasf1Q8R5H6 559 aa17.51■□□□□ 0.39
Shank1-202ENSMUST00000107935 Nol8Q3UHX0 1147 aaKnown RBP17.51■□□□□ 0.39
Shank1-202ENSMUST00000107935 Ranbp1P34022 203 aaKnown RBP17.51■□□□□ 0.39
Shank1-202ENSMUST00000107935 Gng11P61953 73 aa17.51■□□□□ 0.39
Shank1-202ENSMUST00000107935 Vps8Q0P5W1 1427 aa17.51■□□□□ 0.39
Shank1-202ENSMUST00000107935 Wdr63B2RY71 923 aa17.51■□□□□ 0.39
Shank1-202ENSMUST00000107935 TbcaP48428 108 aaKnown RBP17.51■□□□□ 0.39
Shank1-202ENSMUST00000107935 Gas2l3Q3UWW6 683 aa17.51■□□□□ 0.39
Shank1-202ENSMUST00000107935 Sart1Q9Z315 806 aaKnown RBP17.5■□□□□ 0.39
Shank1-202ENSMUST00000107935 Carmil1Q6EDY6 1374 aa17.5■□□□□ 0.39
Shank1-202ENSMUST00000107935 Tspyl2Q7TQI8 677 aa17.5■□□□□ 0.39
Shank1-202ENSMUST00000107935 Fam76aQ922G2 307 aa17.5■□□□□ 0.39
Shank1-202ENSMUST00000107935 Sytl4Q9R0Q1 673 aa17.5■□□□□ 0.39
Shank1-202ENSMUST00000107935 Ehmt1Q5DW34 1296 aa17.5■□□□□ 0.39
Shank1-202ENSMUST00000107935 Cux1P53564 1515 aa17.5■□□□□ 0.39
Shank1-202ENSMUST00000107935 Hoxa7P02830 229 aa17.5■□□□□ 0.39
Shank1-202ENSMUST00000107935 HypkQ9CR41 129 aa17.5■□□□□ 0.39
Shank1-202ENSMUST00000107935 ZfxP17012 799 aa17.49■□□□□ 0.39
Shank1-202ENSMUST00000107935 Gjb2Q00977 226 aa17.49■□□□□ 0.39
Shank1-202ENSMUST00000107935 Washc4Q3UMB9 1173 aa17.49■□□□□ 0.39
Shank1-202ENSMUST00000107935 Gigyf2Q6Y7W8 1291 aaKnown RBP17.49■□□□□ 0.39
Shank1-202ENSMUST00000107935 Rsph10bE9PYQ0 876 aa17.49■□□□□ 0.39
Shank1-202ENSMUST00000107935 Gsto1O09131 240 aa17.49■□□□□ 0.39
Shank1-202ENSMUST00000107935 Apaf1O88879 1249 aa17.49■□□□□ 0.39
Shank1-202ENSMUST00000107935 Lrrfip2Q91WK0 415 aa17.49■□□□□ 0.39
Shank1-202ENSMUST00000107935 Gigyf1Q99MR1 1044 aaKnown RBP17.49■□□□□ 0.39
Shank1-202ENSMUST00000107935 Fsd2Q8BZ52 692 aa17.49■□□□□ 0.39
Shank1-202ENSMUST00000107935 Brms1Q99N20 246 aa17.49■□□□□ 0.39
Shank1-202ENSMUST00000107935 Knop1Q9Z2Q2 478 aaKnown RBP17.48■□□□□ 0.39
Shank1-202ENSMUST00000107935 Fam13aQ8BGI4 693 aa17.48■□□□□ 0.39
Shank1-202ENSMUST00000107935 Ankrd1Q9CR42 319 aa17.48■□□□□ 0.39
Shank1-202ENSMUST00000107935 Spty2d1Q68FG3 682 aa17.48■□□□□ 0.39
Shank1-202ENSMUST00000107935 Ttll5Q8CHB8 1328 aa17.48■□□□□ 0.39
Shank1-202ENSMUST00000107935 NinlQ6ZQ12 1394 aa17.48■□□□□ 0.39
Shank1-202ENSMUST00000107935 Usp25P57080 1055 aa17.47■□□□□ 0.39
Shank1-202ENSMUST00000107935 L3mbtl2P59178 703 aa17.47■□□□□ 0.39
Shank1-202ENSMUST00000107935 Synpo2Q91YE8 1087 aaKnown RBP17.47■□□□□ 0.39
Shank1-202ENSMUST00000107935 L1td1Q587J6 782 aaKnown RBP17.47■□□□□ 0.39
Shank1-202ENSMUST00000107935 SarnpQ9D1J3 210 aaKnown RBP17.47■□□□□ 0.39
Shank1-202ENSMUST00000107935 Hdhd2Q3UGR5 259 aa17.47■□□□□ 0.39
Shank1-202ENSMUST00000107935 Rsrc1Q9DBU6 334 aa17.47■□□□□ 0.39
Shank1-202ENSMUST00000107935 Irgm2A0A140LIF8 407 aa17.47■□□□□ 0.39
Shank1-202ENSMUST00000107935 Ube2hP62257 183 aa17.47■□□□□ 0.39
Shank1-202ENSMUST00000107935 ErbinQ80TH2 1402 aa17.46■□□□□ 0.39
Shank1-202ENSMUST00000107935 Tex35Q14BK3 207 aa17.46■□□□□ 0.39
Shank1-202ENSMUST00000107935 Naa25Q8BWZ3 972 aa17.46■□□□□ 0.39
Shank1-202ENSMUST00000107935 Cecr2E9Q2Z1 1453 aa17.46■□□□□ 0.39
Shank1-202ENSMUST00000107935 Ppfibp1Q8C8U0 969 aaKnown RBP17.46■□□□□ 0.39
Shank1-202ENSMUST00000107935 Smtnl1Q99LM3 459 aa17.46■□□□□ 0.38
Shank1-202ENSMUST00000107935 Cetn2Q9R1K9 172 aa17.46■□□□□ 0.38
Shank1-202ENSMUST00000107935 Akap2O54931 893 aa17.45■□□□□ 0.38
Shank1-202ENSMUST00000107935 Vps41Q5KU39 853 aa17.45■□□□□ 0.38
Shank1-202ENSMUST00000107935 Maco1Q7TQE6 664 aaKnown RBP17.45■□□□□ 0.38
Shank1-202ENSMUST00000107935 Scaf1Q5U4C3 1256 aaKnown RBP17.45■□□□□ 0.38
Shank1-202ENSMUST00000107935 Kdm4aQ8BW72 1064 aa17.45■□□□□ 0.38
Shank1-202ENSMUST00000107935 Ccdc42Q5SV66 316 aa17.45■□□□□ 0.38
Shank1-202ENSMUST00000107935 Bcl11bQ99PV8 884 aa17.45■□□□□ 0.38
Shank1-202ENSMUST00000107935 Tsg101Q61187 391 aa17.44■□□□□ 0.38
Shank1-202ENSMUST00000107935 Rsph4aQ8BYM7 716 aa17.44■□□□□ 0.38
Shank1-202ENSMUST00000107935 Brd3Q8K2F0 726 aaKnown RBP17.44■□□□□ 0.38
Shank1-202ENSMUST00000107935 Grpel1Q99LP6 217 aa17.44■□□□□ 0.38
Shank1-202ENSMUST00000107935 Cdc37l1Q9CZP7 335 aa17.44■□□□□ 0.38
Shank1-202ENSMUST00000107935 Diaph1O08808 1255 aa17.44■□□□□ 0.38
Shank1-202ENSMUST00000107935 Rfc1P35601 1131 aa17.44■□□□□ 0.38
Shank1-202ENSMUST00000107935 Tbc1d8Q9Z1A9 1134 aa17.44■□□□□ 0.38
Shank1-202ENSMUST00000107935 Kif5bQ61768 963 aa17.44■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 17.1 ms