RNA–Protein interactions for RNA: ENSMUST00000100164.4

Hoxc4-201, Transcript of Homeobox protein Hox-C4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxc4, Length 1,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4-201ENSMUST00000100164 Zscan25B2RX31 543 aa17.09■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Brinp3Q499E0 766 aa17.09■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 IbspQ61711 324 aa17.09■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Tbc1d31Q6NXY1 996 aa17.09■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Fbxo2Q80UW2 297 aa17.09■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 GorabQ8BRM2 368 aa17.09■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Vsig10D3YX43 558 aa17.08■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Kif3aP28741 701 aa17.08■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 MvpQ9EQK5 861 aa17.08■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Cavin4A2AMM0 362 aa17.08■□□□□ 0.32
Hoxc4-201ENSMUST00000100164 Anp32cQ64G17 123 aa17.08■□□□□ 0.32
Hoxc4-201ENSMUST00000100164 Kiaa0753Q6A000 959 aa17.08■□□□□ 0.32
Hoxc4-201ENSMUST00000100164 Cnga1P29974 684 aa17.07■□□□□ 0.32
Hoxc4-201ENSMUST00000100164 Aldh1l1Q8R0Y6 902 aa17.07■□□□□ 0.32
Hoxc4-201ENSMUST00000100164 Aplp1Q03157 653 aa17.06■□□□□ 0.32
Hoxc4-201ENSMUST00000100164 Ppip5k2Q6ZQB6 1129 aa17.06■□□□□ 0.32
Hoxc4-201ENSMUST00000100164 Aldh8a1Q8BH00 487 aa17.06■□□□□ 0.32
Hoxc4-201ENSMUST00000100164 Znf330Q922H9 316 aa17.06■□□□□ 0.32
Hoxc4-201ENSMUST00000100164 CarsQ9ER72 831 aaKnown RBP17.06■□□□□ 0.32
Hoxc4-201ENSMUST00000100164 Elp1Q7TT37 1333 aaKnown RBP17.05■□□□□ 0.32
Hoxc4-201ENSMUST00000100164 Prdm10Q3UTQ7 1184 aa17.05■□□□□ 0.32
Hoxc4-201ENSMUST00000100164 Ankrd44B2RXR6 993 aa17.04■□□□□ 0.32
Hoxc4-201ENSMUST00000100164 Grpel1Q99LP6 217 aa17.04■□□□□ 0.32
Hoxc4-201ENSMUST00000100164 Unc13bQ9Z1N9 1602 aa17.04■□□□□ 0.32
Hoxc4-201ENSMUST00000100164 Asxl2Q8BZ32 1370 aa17.04■□□□□ 0.32
Hoxc4-201ENSMUST00000100164 Ccdc173A0JLY1 547 aa17.04■□□□□ 0.32
Hoxc4-201ENSMUST00000100164 Zdhhc9P59268 364 aa17.04■□□□□ 0.32
Hoxc4-201ENSMUST00000100164 Puf60Q3UEB3 564 aaKnown RBP17.04■□□□□ 0.32
Hoxc4-201ENSMUST00000100164 Slain2Q8CI08 581 aa17.04■□□□□ 0.32
Hoxc4-201ENSMUST00000100164 Gripap1Q8VD04 806 aa17.04■□□□□ 0.32
Hoxc4-201ENSMUST00000100164 Ift172Q6VH22 1749 aa17.03■□□□□ 0.32
Hoxc4-201ENSMUST00000100164 Mcm2P97310 904 aa17.03■□□□□ 0.32
Hoxc4-201ENSMUST00000100164 Q3UPC7 1272 aa17.03■□□□□ 0.32
Hoxc4-201ENSMUST00000100164 Nrxn1Q9CS84 1514 aa17.03■□□□□ 0.32
Hoxc4-201ENSMUST00000100164 Usp32F8VPZ3 1604 aa17.02■□□□□ 0.32
Hoxc4-201ENSMUST00000100164 AU022751B1B0V2 589 aa17.02■□□□□ 0.32
Hoxc4-201ENSMUST00000100164 Gimap5Q8BWF2 308 aa17.02■□□□□ 0.32
Hoxc4-201ENSMUST00000100164 Atp1b4Q99ME6 356 aa17.02■□□□□ 0.32
Hoxc4-201ENSMUST00000100164 Gcc1Q9D4H2 778 aa17.02■□□□□ 0.32
Hoxc4-201ENSMUST00000100164 Cyp27a1Q9DBG1 533 aa17.02■□□□□ 0.32
Hoxc4-201ENSMUST00000100164 Syce3B5KM66 88 aa17.02■□□□□ 0.31
Hoxc4-201ENSMUST00000100164 MsnP26041 577 aaKnown RBP17.02■□□□□ 0.31
Hoxc4-201ENSMUST00000100164 Kif4P33174 1231 aa17.02■□□□□ 0.31
Hoxc4-201ENSMUST00000100164 NinlQ6ZQ12 1394 aa17.01■□□□□ 0.31
Hoxc4-201ENSMUST00000100164 Nectin2P32507 530 aa17.01■□□□□ 0.31
Hoxc4-201ENSMUST00000100164 Trim27Q62158 513 aa17.01■□□□□ 0.31
Hoxc4-201ENSMUST00000100164 Atp7bQ64446 1462 aa17.01■□□□□ 0.31
Hoxc4-201ENSMUST00000100164 Pik3c2aQ61194 1686 aa17.01■□□□□ 0.31
Hoxc4-201ENSMUST00000100164 Plekhm2Q80TQ5 1018 aa17■□□□□ 0.31
Hoxc4-201ENSMUST00000100164 Inpp5bQ8K337 993 aa17■□□□□ 0.31
Hoxc4-201ENSMUST00000100164 Nucb1Q02819 459 aaKnown RBP17■□□□□ 0.31
Hoxc4-201ENSMUST00000100164 Ppp6r3Q922D4 844 aa17■□□□□ 0.31
Hoxc4-201ENSMUST00000100164 Q9D9H8 365 aa17■□□□□ 0.31
Hoxc4-201ENSMUST00000100164 Evi5lH3BKQ3 813 aa16.99■□□□□ 0.31
Hoxc4-201ENSMUST00000100164 Eif4g2Q62448 906 aaKnown RBP16.99■□□□□ 0.31
Hoxc4-201ENSMUST00000100164 Nutm1Q8BHP2 1126 aa16.99■□□□□ 0.31
Hoxc4-201ENSMUST00000100164 HnrnpuQ8VEK3 800 aaKnown RBP16.99■□□□□ 0.31
Hoxc4-201ENSMUST00000100164 Dnajc14Q921R4 703 aa16.99■□□□□ 0.31
Hoxc4-201ENSMUST00000100164 Rnf123Q5XPI3 1314 aa16.99■□□□□ 0.31
Hoxc4-201ENSMUST00000100164 Nsd3Q6P2L6 1439 aa16.99■□□□□ 0.31
Hoxc4-201ENSMUST00000100164 Ncbp1Q3UYV9 790 aaKnown RBP16.98■□□□□ 0.31
Hoxc4-201ENSMUST00000100164 Tbc1d30Q69ZT9 766 aa16.98■□□□□ 0.31
Hoxc4-201ENSMUST00000100164 E4f1Q8CCE9 783 aa16.98■□□□□ 0.31
Hoxc4-201ENSMUST00000100164 Nwd1A6H603 1563 aa16.98■□□□□ 0.31
Hoxc4-201ENSMUST00000100164 Shq1Q7TMX5 569 aa16.98■□□□□ 0.31
Hoxc4-201ENSMUST00000100164 Mrps27Q8BK72 415 aaKnown RBP16.98■□□□□ 0.31
Hoxc4-201ENSMUST00000100164 Ccdc146E9Q9F7 977 aa16.97■□□□□ 0.31
Hoxc4-201ENSMUST00000100164 Fchsd2Q3USJ8 740 aa16.97■□□□□ 0.31
Hoxc4-201ENSMUST00000100164 Swt1Q9DBQ9 907 aa16.97■□□□□ 0.31
Hoxc4-201ENSMUST00000100164 Pdia3P27773 505 aaKnown RBP16.97■□□□□ 0.31
Hoxc4-201ENSMUST00000100164 Rbm27Q5SFM8 1060 aaKnown RBP16.96■□□□□ 0.31
Hoxc4-201ENSMUST00000100164 CenpjQ569L8 1344 aa16.95■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 Fam184aE9PW83 1143 aa16.95■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 Stag3O70576 1240 aa16.95■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 Bach2P97303 839 aa16.95■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 Vamp4O70480 141 aa16.95■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 Fam13bQ8K2H3 851 aa16.95■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 Gm45015A0A140LII9 184 aa16.94■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 Gm18336A0A140LIU8 765 aa16.94■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 Hvcn1Q3U2S8 269 aa16.94■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 Atf3Q60765 181 aa16.94■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 Zfp251Q6PCX8 632 aa16.94■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 Cavin2Q63918 418 aaKnown RBP16.93■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 Tmco5bQ80X59 307 aa16.93■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 Slc52a2Q9D8F3 450 aa16.93■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 Irx4Q9QY61 515 aa16.93■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 Rnf214Q8BFU3 668 aaKnown RBP16.93■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 Col14a1Q80X19 1797 aa16.93■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 Tmem94Q7TSH8 1360 aa16.92■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 Vwa3bJ9JI28 736 aa16.92■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 Ptgs1P22437 602 aa16.92■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 Chd1lQ9CXF7 900 aa16.92■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 HnrnpmQ9D0E1 729 aaKnown RBP16.92■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 Cps1Q8C196 1500 aa16.92■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 Gadd45bP22339 160 aa16.91■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 Fbln2P37889 1221 aa16.91■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 Aldh1l2Q8K009 923 aa16.91■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 Gdpd2Q9ESM6 539 aa16.91■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 EzrP26040 586 aaKnown RBP16.91■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 Vgll3P85442 326 aa16.91■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 37.3 ms