RNA–Protein interactions for RNA: ENSMUST00000099937.4

Ccdc58-201, Transcript of Coiled-coil domain-containing protein 58, mousemouse

TSL 3 BASIC

Gene Ccdc58, Length 747 nt, Biotype protein coding, Subcellular localisation Axon, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58-201ENSMUST00000099937 Ints5Q8CHT3 1018 aa18.77■□□□□ 0.6
Ccdc58-201ENSMUST00000099937 Rad23bP54728 416 aa18.76■□□□□ 0.59
Ccdc58-201ENSMUST00000099937 Aplp2Q06335 707 aa18.76■□□□□ 0.59
Ccdc58-201ENSMUST00000099937 Ciz1Q8VEH2 845 aa18.76■□□□□ 0.59
Ccdc58-201ENSMUST00000099937 Slc12a5Q91V14 1138 aa18.76■□□□□ 0.59
Ccdc58-201ENSMUST00000099937 Ppp1r15aP17564 657 aa18.75■□□□□ 0.59
Ccdc58-201ENSMUST00000099937 Kcnq2Q9Z351 759 aa18.75■□□□□ 0.59
Ccdc58-201ENSMUST00000099937 ApobrQ8VBT6 942 aa18.73■□□□□ 0.59
Ccdc58-201ENSMUST00000099937 Trpc5Q9QX29 975 aa18.73■□□□□ 0.59
Ccdc58-201ENSMUST00000099937 Tjp1P39447 1745 aaKnown RBP18.73■□□□□ 0.59
Ccdc58-201ENSMUST00000099937 Crb1Q8VHS2 1405 aa18.73■□□□□ 0.59
Ccdc58-201ENSMUST00000099937 Prom2Q3UUY6 835 aa18.72■□□□□ 0.59
Ccdc58-201ENSMUST00000099937 Ccnl1Q52KE7 532 aaKnown RBP18.72■□□□□ 0.59
Ccdc58-201ENSMUST00000099937 Asic4Q7TNS7 539 aa18.72■□□□□ 0.59
Ccdc58-201ENSMUST00000099937 Igf2rQ07113 2483 aaKnown RBP18.71■□□□□ 0.59
Ccdc58-201ENSMUST00000099937 Larp1bA0A0A6YXJ7 370 aaKnown RBP18.71■□□□□ 0.59
Ccdc58-201ENSMUST00000099937 ErfeQ6PGN1 340 aa18.71■□□□□ 0.59
Ccdc58-201ENSMUST00000099937 Zswim8Q3UHH1 1832 aaKnown RBP18.71■□□□□ 0.59
Ccdc58-201ENSMUST00000099937 Mcm10Q0VBD2 885 aa18.7■□□□□ 0.58
Ccdc58-201ENSMUST00000099937 Igsf1Q7TQA1 1317 aa18.7■□□□□ 0.58
Ccdc58-201ENSMUST00000099937 Klc3Q91W40 508 aa18.69■□□□□ 0.58
Ccdc58-201ENSMUST00000099937 Phkg2Q9DB30 406 aa18.69■□□□□ 0.58
Ccdc58-201ENSMUST00000099937 Pdzd9Q9D9M4 266 aa18.68■□□□□ 0.58
Ccdc58-201ENSMUST00000099937 Aox2Q5SGK3 1345 aa18.68■□□□□ 0.58
Ccdc58-201ENSMUST00000099937 PnisrA2AJT4 805 aaKnown RBP18.67■□□□□ 0.58
Ccdc58-201ENSMUST00000099937 Ssfa2Q922B9 1252 aa18.67■□□□□ 0.58
Ccdc58-201ENSMUST00000099937 CoblQ5NBX1 1337 aaKnown RBP18.67■□□□□ 0.58
Ccdc58-201ENSMUST00000099937 ClspnQ80YR7 1315 aa18.67■□□□□ 0.58
Ccdc58-201ENSMUST00000099937 Lrp5Q91VN0 1614 aa18.67■□□□□ 0.58
Ccdc58-201ENSMUST00000099937 Gm21663A0A0G2JE01 267 aa18.66■□□□□ 0.58
Ccdc58-201ENSMUST00000099937 Gm7361D3Z6R1 267 aa18.66■□□□□ 0.58
Ccdc58-201ENSMUST00000099937 5031410I06RikE9Q4E0 267 aa18.66■□□□□ 0.58
Ccdc58-201ENSMUST00000099937 Gm1979E9QAN3 267 aa18.66■□□□□ 0.58
Ccdc58-201ENSMUST00000099937 Gm5862K7N5V5 267 aa18.66■□□□□ 0.58
Ccdc58-201ENSMUST00000099937 Gm10220K7N660 267 aa18.66■□□□□ 0.58
Ccdc58-201ENSMUST00000099937 Plin1Q8CGN5 517 aa18.66■□□□□ 0.58
Ccdc58-201ENSMUST00000099937 Atg3Q9CPX6 314 aa18.66■□□□□ 0.58
Ccdc58-201ENSMUST00000099937 Hdac6Q9Z2V5 1149 aa18.66■□□□□ 0.58
Ccdc58-201ENSMUST00000099937 Eif3bQ8JZQ9 803 aaKnown RBP18.64■□□□□ 0.57
Ccdc58-201ENSMUST00000099937 Col23a1Q8K4G2 532 aa18.64■□□□□ 0.57
Ccdc58-201ENSMUST00000099937 Gm13023A2A8N2 498 aa18.63■□□□□ 0.57
Ccdc58-201ENSMUST00000099937 Slc5a1Q8C3K6 665 aa18.63■□□□□ 0.57
Ccdc58-201ENSMUST00000099937 IncenpQ9WU62 880 aa18.63■□□□□ 0.57
Ccdc58-201ENSMUST00000099937 Sned1Q70E20 1403 aa18.63■□□□□ 0.57
Ccdc58-201ENSMUST00000099937 Bicdl1A0JNT9 577 aa18.62■□□□□ 0.57
Ccdc58-201ENSMUST00000099937 MeiocA2AG06 965 aa18.62■□□□□ 0.57
Ccdc58-201ENSMUST00000099937 TnikP83510 1323 aa18.61■□□□□ 0.57
Ccdc58-201ENSMUST00000099937 Fchsd2Q3USJ8 740 aa18.61■□□□□ 0.57
Ccdc58-201ENSMUST00000099937 Sumf1Q8R0F3 372 aa18.61■□□□□ 0.57
Ccdc58-201ENSMUST00000099937 Snap23O09044 210 aa18.6■□□□□ 0.57
Ccdc58-201ENSMUST00000099937 Msl1Q6PDM1 616 aa18.6■□□□□ 0.57
Ccdc58-201ENSMUST00000099937 Cap2Q9CYT6 476 aa18.6■□□□□ 0.57
Ccdc58-201ENSMUST00000099937 PalmQ9Z0P4 383 aa18.6■□□□□ 0.57
Ccdc58-201ENSMUST00000099937 Hirip3Q8BLH7 601 aa18.59■□□□□ 0.57
Ccdc58-201ENSMUST00000099937 Amotl1Q9D4H4 968 aa18.59■□□□□ 0.57
Ccdc58-201ENSMUST00000099937 Spef2Q8C9J3 1734 aa18.59■□□□□ 0.57
Ccdc58-201ENSMUST00000099937 Msh6P54276 1358 aaKnown RBP18.58■□□□□ 0.57
Ccdc58-201ENSMUST00000099937 Ppp2r1aQ76MZ3 589 aa18.57■□□□□ 0.56
Ccdc58-201ENSMUST00000099937 Mtfr1lQ9CWE0 289 aa18.57■□□□□ 0.56
Ccdc58-201ENSMUST00000099937 Dcaf5Q80T85 946 aa18.56■□□□□ 0.56
Ccdc58-201ENSMUST00000099937 Ubr3Q5U430 1889 aa18.56■□□□□ 0.56
Ccdc58-201ENSMUST00000099937 HypkQ9CR41 129 aa18.55■□□□□ 0.56
Ccdc58-201ENSMUST00000099937 Sos1Q62245 1319 aa18.54■□□□□ 0.56
Ccdc58-201ENSMUST00000099937 Miga2Q8BK03 593 aa18.54■□□□□ 0.56
Ccdc58-201ENSMUST00000099937 CpzQ8R4V4 654 aa18.54■□□□□ 0.56
Ccdc58-201ENSMUST00000099937 Ubr2Q6WKZ8 1755 aa18.54■□□□□ 0.56
Ccdc58-201ENSMUST00000099937 Spata31d1bE9QA57 1361 aa18.54■□□□□ 0.56
Ccdc58-201ENSMUST00000099937 Ccdc155Q80VJ8 648 aa18.53■□□□□ 0.56
Ccdc58-201ENSMUST00000099937 Sgip1Q8VD37 806 aa18.53■□□□□ 0.56
Ccdc58-201ENSMUST00000099937 Jdp2P97875 163 aa18.52■□□□□ 0.56
Ccdc58-201ENSMUST00000099937 Slfnl1Q8BHW9 410 aa18.52■□□□□ 0.56
Ccdc58-201ENSMUST00000099937 Tlr8P58682 1032 aa18.51■□□□□ 0.55
Ccdc58-201ENSMUST00000099937 Gsdma3Q5Y4Y6 464 aa18.51■□□□□ 0.55
Ccdc58-201ENSMUST00000099937 C4bP01029 1738 aa18.51■□□□□ 0.55
Ccdc58-201ENSMUST00000099937 Col11a2Q64739 1736 aa18.5■□□□□ 0.55
Ccdc58-201ENSMUST00000099937 Chrna2Q91X60 512 aa18.5■□□□□ 0.55
Ccdc58-201ENSMUST00000099937 Usp21Q9QZL6 566 aa18.5■□□□□ 0.55
Ccdc58-201ENSMUST00000099937 Plch1Q4KWH5 1682 aa18.48■□□□□ 0.55
Ccdc58-201ENSMUST00000099937 Kiaa1107Q80TK0 1369 aa18.48■□□□□ 0.55
Ccdc58-201ENSMUST00000099937 Clcn1Q64347 994 aa18.48■□□□□ 0.55
Ccdc58-201ENSMUST00000099937 Chmp7Q8R1T1 451 aa18.48■□□□□ 0.55
Ccdc58-201ENSMUST00000099937 Ric1Q69ZJ7 1422 aa18.48■□□□□ 0.55
Ccdc58-201ENSMUST00000099937 NppbP40753 121 aa18.47■□□□□ 0.55
Ccdc58-201ENSMUST00000099937 Smarcc1P97496 1104 aa18.47■□□□□ 0.55
Ccdc58-201ENSMUST00000099937 Jmjd4Q8BFT6 427 aa18.47■□□□□ 0.55
Ccdc58-201ENSMUST00000099937 Znrd1-asQ8R0E5 213 aa18.47■□□□□ 0.55
Ccdc58-201ENSMUST00000099937 Togaram1Q6A070 1776 aaKnown RBP18.46■□□□□ 0.55
Ccdc58-201ENSMUST00000099937 Magea6O89010 325 aa18.46■□□□□ 0.55
Ccdc58-201ENSMUST00000099937 Hmgb2P30681 210 aaKnown RBP18.46■□□□□ 0.55
Ccdc58-201ENSMUST00000099937 TmpoQ61033 693 aaKnown RBP18.46■□□□□ 0.55
Ccdc58-201ENSMUST00000099937 Rapgefl1Q68EF8 662 aa18.46■□□□□ 0.55
Ccdc58-201ENSMUST00000099937 Magea3Q6T340 320 aa18.46■□□□□ 0.55
Ccdc58-201ENSMUST00000099937 Tcerg1Q8CGF7 1100 aaKnown RBP18.46■□□□□ 0.55
Ccdc58-201ENSMUST00000099937 Col4a1P02463 1669 aa18.46■□□□□ 0.55
Ccdc58-201ENSMUST00000099937 Kndc1Q0KK55 1742 aa18.46■□□□□ 0.55
Ccdc58-201ENSMUST00000099937 Trpm3Q5F4S9 1721 aa18.46■□□□□ 0.55
Ccdc58-201ENSMUST00000099937 Q4VA45 678 aa18.45■□□□□ 0.54
Ccdc58-201ENSMUST00000099937 Syde2E9PUP1 1314 aa18.45■□□□□ 0.54
Ccdc58-201ENSMUST00000099937 Ppef1O35655 650 aa18.44■□□□□ 0.54
Ccdc58-201ENSMUST00000099937 1810065E05RikQ5NC41 235 aa18.44■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 35.1 ms