RNA–Protein interactions for RNA: ENSMUST00000093196.10

Hmgb1-202, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,092 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-202ENSMUST00000093196 Tulp4Q9JIL5 1547 aa17.2■□□□□ 0.34
Hmgb1-202ENSMUST00000093196 PtpruB1AUH1 1446 aa17.2■□□□□ 0.34
Hmgb1-202ENSMUST00000093196 Kif1aP33173 1695 aa17.2■□□□□ 0.34
Hmgb1-202ENSMUST00000093196 Phox2bO35690 314 aa17.19■□□□□ 0.34
Hmgb1-202ENSMUST00000093196 Q9D9H8 365 aa17.19■□□□□ 0.34
Hmgb1-202ENSMUST00000093196 Usp34Q6ZQ93 3582 aa17.19■□□□□ 0.34
Hmgb1-202ENSMUST00000093196 Zmym3Q9JLM4 1370 aa17.18■□□□□ 0.34
Hmgb1-202ENSMUST00000093196 Stxbp5lQ5DQR4 1185 aa17.18■□□□□ 0.34
Hmgb1-202ENSMUST00000093196 Atp1b4Q99ME6 356 aa17.18■□□□□ 0.34
Hmgb1-202ENSMUST00000093196 Retreg3Q9CQV4 466 aa17.18■□□□□ 0.34
Hmgb1-202ENSMUST00000093196 Pdcd7Q9WTY1 482 aa17.18■□□□□ 0.34
Hmgb1-202ENSMUST00000093196 GalcP54818 684 aa17.17■□□□□ 0.34
Hmgb1-202ENSMUST00000093196 Mdc1Q5PSV9 1707 aa17.17■□□□□ 0.34
Hmgb1-202ENSMUST00000093196 Map3k7Q62073 579 aa17.17■□□□□ 0.34
Hmgb1-202ENSMUST00000093196 Upf1Q9EPU0 1124 aaKnown RBP17.17■□□□□ 0.34
Hmgb1-202ENSMUST00000093196 Naip1Q9QWK5 1403 aa17.17■□□□□ 0.34
Hmgb1-202ENSMUST00000093196 Abcf1Q6P542 837 aaKnown RBP17.16■□□□□ 0.34
Hmgb1-202ENSMUST00000093196 Prr18Q6PAN7 307 aa17.16■□□□□ 0.34
Hmgb1-202ENSMUST00000093196 Txnrd1Q9JMH6 613 aa17.16■□□□□ 0.34
Hmgb1-202ENSMUST00000093196 Ppp1r1bQ60829 194 aa17.15■□□□□ 0.34
Hmgb1-202ENSMUST00000093196 Camta1A2A891 1682 aa17.15■□□□□ 0.34
Hmgb1-202ENSMUST00000093196 Erbb3Q61526 1339 aa17.15■□□□□ 0.34
Hmgb1-202ENSMUST00000093196 Mroh1E0CZ22 1640 aa17.14■□□□□ 0.33
Hmgb1-202ENSMUST00000093196 Atf4Q06507 349 aa17.14■□□□□ 0.33
Hmgb1-202ENSMUST00000093196 Onecut3Q8K557 490 aa17.12■□□□□ 0.33
Hmgb1-202ENSMUST00000093196 Fbxo33Q8VE08 562 aa17.12■□□□□ 0.33
Hmgb1-202ENSMUST00000093196 Mfsd10Q9D2V8 456 aaKnown RBP17.12■□□□□ 0.33
Hmgb1-202ENSMUST00000093196 MaddQ80U28 1577 aa17.11■□□□□ 0.33
Hmgb1-202ENSMUST00000093196 GakQ99KY4 1305 aa17.11■□□□□ 0.33
Hmgb1-202ENSMUST00000093196 Kif23E9Q5G3 953 aa17.1■□□□□ 0.33
Hmgb1-202ENSMUST00000093196 Emilin1Q99K41 1017 aa17.09■□□□□ 0.33
Hmgb1-202ENSMUST00000093196 Apbb1Q9QXJ1 710 aa17.09■□□□□ 0.33
Hmgb1-202ENSMUST00000093196 Lrit1Q8K099 624 aa17.08■□□□□ 0.32
Hmgb1-202ENSMUST00000093196 Erich6D3Z6S9 713 aa17.07■□□□□ 0.32
Hmgb1-202ENSMUST00000093196 Magea6O89010 325 aa17.07■□□□□ 0.32
Hmgb1-202ENSMUST00000093196 Magea3Q6T340 320 aa17.07■□□□□ 0.32
Hmgb1-202ENSMUST00000093196 Tmc3Q7TQ69 1130 aa17.07■□□□□ 0.32
Hmgb1-202ENSMUST00000093196 Nob1Q8BW10 403 aa17.07■□□□□ 0.32
Hmgb1-202ENSMUST00000093196 Iqgap3F8VQ29 1632 aa17.07■□□□□ 0.32
Hmgb1-202ENSMUST00000093196 Tmem2Q5FWI3 1383 aa17.06■□□□□ 0.32
Hmgb1-202ENSMUST00000093196 Mia2Q91ZV0 1396 aa17.06■□□□□ 0.32
Hmgb1-202ENSMUST00000093196 OatP29758 439 aa17.06■□□□□ 0.32
Hmgb1-202ENSMUST00000093196 Spon1Q8VCC9 807 aa17.06■□□□□ 0.32
Hmgb1-202ENSMUST00000093196 Usp21Q9QZL6 566 aa17.06■□□□□ 0.32
Hmgb1-202ENSMUST00000093196 D430041D05RikF6ZGR6 1678 aa17.06■□□□□ 0.32
Hmgb1-202ENSMUST00000093196 Cabp1Q9JLK7 227 aa17.05■□□□□ 0.32
Hmgb1-202ENSMUST00000093196 Ncor1Q60974 2453 aa17.05■□□□□ 0.32
Hmgb1-202ENSMUST00000093196 Pim2Q62070 370 aa17.04■□□□□ 0.32
Hmgb1-202ENSMUST00000093196 Ano8Q6PB70 1060 aa17.04■□□□□ 0.32
Hmgb1-202ENSMUST00000093196 Pm20d1Q8C165 503 aa17.04■□□□□ 0.32
Hmgb1-202ENSMUST00000093196 Kat6bQ8BRB7 1872 aa17.03■□□□□ 0.32
Hmgb1-202ENSMUST00000093196 Ppm1fQ8CGA0 452 aa17.02■□□□□ 0.32
Hmgb1-202ENSMUST00000093196 Dnajc14Q921R4 703 aa17.02■□□□□ 0.32
Hmgb1-202ENSMUST00000093196 Crim1Q9JLL0 1037 aa17.02■□□□□ 0.32
Hmgb1-202ENSMUST00000093196 Q3UJC8 639 aa17.01■□□□□ 0.31
Hmgb1-202ENSMUST00000093196 Mrps5Q99N87 432 aaKnown RBP17.01■□□□□ 0.31
Hmgb1-202ENSMUST00000093196 Zcrb1Q9CZ96 217 aaKnown RBP17.01■□□□□ 0.31
Hmgb1-202ENSMUST00000093196 Trbv21A0A0A6YX06 97 aa17■□□□□ 0.31
Hmgb1-202ENSMUST00000093196 Mllt6B1AR10 1109 aa17■□□□□ 0.31
Hmgb1-202ENSMUST00000093196 Ptcd1Q8C2E4 695 aaKnown RBP17■□□□□ 0.31
Hmgb1-202ENSMUST00000093196 Shq1Q7TMX5 569 aa16.99■□□□□ 0.31
Hmgb1-202ENSMUST00000093196 Dkk1O54908 272 aa16.98■□□□□ 0.31
Hmgb1-202ENSMUST00000093196 Scaf8Q6DID3 1268 aa16.98■□□□□ 0.31
Hmgb1-202ENSMUST00000093196 Nwd2Q6P5U7 1742 aa16.98■□□□□ 0.31
Hmgb1-202ENSMUST00000093196 C5P06684 1680 aa16.97■□□□□ 0.31
Hmgb1-202ENSMUST00000093196 Casz1Q9CWL2 1761 aa16.97■□□□□ 0.31
Hmgb1-202ENSMUST00000093196 Dsg2O55111 1122 aa16.97■□□□□ 0.31
Hmgb1-202ENSMUST00000093196 SobpQ0P5V2 864 aa16.97■□□□□ 0.31
Hmgb1-202ENSMUST00000093196 Pxylp1Q8BHA9 480 aa16.97■□□□□ 0.31
Hmgb1-202ENSMUST00000093196 Col16a1Q8BLX7 1580 aa16.97■□□□□ 0.31
Hmgb1-202ENSMUST00000093196 Tsr1Q5SWD9 803 aa16.96■□□□□ 0.31
Hmgb1-202ENSMUST00000093196 Gja3Q64448 417 aa16.96■□□□□ 0.31
Hmgb1-202ENSMUST00000093196 Ncapd2Q8K2Z4 1392 aa16.96■□□□□ 0.31
Hmgb1-202ENSMUST00000093196 Myom3A2ABU4 1439 aa16.96■□□□□ 0.3
Hmgb1-202ENSMUST00000093196 Farp1F8VPU2 1048 aa16.95■□□□□ 0.3
Hmgb1-202ENSMUST00000093196 Mtfr1lQ9CWE0 289 aa16.95■□□□□ 0.3
Hmgb1-202ENSMUST00000093196 Speer3W4VSP1 261 aa16.95■□□□□ 0.3
Hmgb1-202ENSMUST00000093196 Acin1Q9JIX8 1338 aaKnown RBP16.95■□□□□ 0.3
Hmgb1-202ENSMUST00000093196 Als2Q920R0 1651 aa16.94■□□□□ 0.3
Hmgb1-202ENSMUST00000093196 Rnaseh2aQ9CWY8 301 aa16.94■□□□□ 0.3
Hmgb1-202ENSMUST00000093196 Sall3Q62255 1320 aa16.93■□□□□ 0.3
Hmgb1-202ENSMUST00000093196 Wdr17E9Q271 1322 aa16.92■□□□□ 0.3
Hmgb1-202ENSMUST00000093196 Tet3Q8BG87 1668 aa16.91■□□□□ 0.3
Hmgb1-202ENSMUST00000093196 AU022751B1B0V2 589 aa16.91■□□□□ 0.3
Hmgb1-202ENSMUST00000093196 Idi1P58044 227 aa16.91■□□□□ 0.3
Hmgb1-202ENSMUST00000093196 Pard3Q99NH2 1333 aa16.91■□□□□ 0.3
Hmgb1-202ENSMUST00000093196 Adam19O35674 920 aa16.9■□□□□ 0.3
Hmgb1-202ENSMUST00000093196 ZgpatQ8VDM1 511 aa16.9■□□□□ 0.3
Hmgb1-202ENSMUST00000093196 Il16O54824 1322 aa16.89■□□□□ 0.29
Hmgb1-202ENSMUST00000093196 Gigyf2Q6Y7W8 1291 aaKnown RBP16.88■□□□□ 0.29
Hmgb1-202ENSMUST00000093196 Ciapin1Q8WTY4 309 aa16.88■□□□□ 0.29
Hmgb1-202ENSMUST00000093196 Uhrf1bp1lA2RSJ4 1457 aa16.87■□□□□ 0.29
Hmgb1-202ENSMUST00000093196 Fam181bQ80VF6 417 aa16.87■□□□□ 0.29
Hmgb1-202ENSMUST00000093196 HrcG5E8J6 738 aa16.86■□□□□ 0.29
Hmgb1-202ENSMUST00000093196 Nudt12Q9DCN1 462 aa16.86■□□□□ 0.29
Hmgb1-202ENSMUST00000093196 ErbinQ80TH2 1402 aa16.86■□□□□ 0.29
Hmgb1-202ENSMUST00000093196 Cdk5rap2Q8K389 1822 aa16.85■□□□□ 0.29
Hmgb1-202ENSMUST00000093196 Rbm46P86049 533 aa16.85■□□□□ 0.29
Hmgb1-202ENSMUST00000093196 Msh5Q9QUM7 833 aa16.85■□□□□ 0.29
Hmgb1-202ENSMUST00000093196 Mug2P28666 1451 aa16.85■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms