RNA–Protein interactions for RNA: ENSMUST00000049908.10

Ssbp4-201, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp4, Length 1,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-201ENSMUST00000049908 Larp1bA0A0A6YXJ7 370 aaKnown RBP27.88■■■□□ 2.05
Ssbp4-201ENSMUST00000049908 Amotl1Q9D4H4 968 aa27.88■■■□□ 2.05
Ssbp4-201ENSMUST00000049908 PappaQ8R4K8 1624 aa27.88■■■□□ 2.05
Ssbp4-201ENSMUST00000049908 Tsen2Q6P7W5 460 aa27.87■■■□□ 2.05
Ssbp4-201ENSMUST00000049908 Phkg2Q9DB30 406 aa27.87■■■□□ 2.05
Ssbp4-201ENSMUST00000049908 TnikP83510 1323 aa27.86■■■□□ 2.05
Ssbp4-201ENSMUST00000049908 Rpgrip1lQ8CG73 1264 aa27.86■■■□□ 2.05
Ssbp4-201ENSMUST00000049908 Abca3Q8R420 1704 aa27.86■■■□□ 2.05
Ssbp4-201ENSMUST00000049908 Gm21663A0A0G2JE01 267 aa27.85■■■□□ 2.05
Ssbp4-201ENSMUST00000049908 Gm7361D3Z6R1 267 aa27.85■■■□□ 2.05
Ssbp4-201ENSMUST00000049908 5031410I06RikE9Q4E0 267 aa27.85■■■□□ 2.05
Ssbp4-201ENSMUST00000049908 Gm1979E9QAN3 267 aa27.85■■■□□ 2.05
Ssbp4-201ENSMUST00000049908 Gm5862K7N5V5 267 aa27.85■■■□□ 2.05
Ssbp4-201ENSMUST00000049908 Gm10220K7N660 267 aa27.85■■■□□ 2.05
Ssbp4-201ENSMUST00000049908 Rab11fip3Q8CHD8 1047 aa27.85■■■□□ 2.05
Ssbp4-201ENSMUST00000049908 Spef2Q8C9J3 1734 aa27.85■■■□□ 2.05
Ssbp4-201ENSMUST00000049908 Mcm10Q0VBD2 885 aa27.84■■■□□ 2.05
Ssbp4-201ENSMUST00000049908 Slc5a1Q8C3K6 665 aa27.84■■■□□ 2.05
Ssbp4-201ENSMUST00000049908 Hmgb2P30681 210 aaKnown RBP27.83■■■□□ 2.05
Ssbp4-201ENSMUST00000049908 Ccnl1Q52KE7 532 aaKnown RBP27.83■■■□□ 2.05
Ssbp4-201ENSMUST00000049908 GsdmaQ9EST1 446 aa27.83■■■□□ 2.05
Ssbp4-201ENSMUST00000049908 Q7TT23 1179 aa27.83■■■□□ 2.04
Ssbp4-201ENSMUST00000049908 Q8BT18 775 aa27.83■■■□□ 2.04
Ssbp4-201ENSMUST00000049908 Kiaa0319lQ8K135 1048 aa27.83■■■□□ 2.04
Ssbp4-201ENSMUST00000049908 Ciz1Q8VEH2 845 aa27.83■■■□□ 2.04
Ssbp4-201ENSMUST00000049908 Ssfa2Q922B9 1252 aa27.83■■■□□ 2.04
Ssbp4-201ENSMUST00000049908 Ankrd13dQ6PD24 605 aa27.82■■■□□ 2.04
Ssbp4-201ENSMUST00000049908 Asic4Q7TNS7 539 aa27.81■■■□□ 2.04
Ssbp4-201ENSMUST00000049908 Pdzd9Q9D9M4 266 aa27.81■■■□□ 2.04
Ssbp4-201ENSMUST00000049908 Shank3Q4ACU6 1730 aa27.81■■■□□ 2.04
Ssbp4-201ENSMUST00000049908 Klc3Q91W40 508 aa27.8■■■□□ 2.04
Ssbp4-201ENSMUST00000049908 U2af1Q9D883 239 aaKnown RBP27.79■■■□□ 2.04
Ssbp4-201ENSMUST00000049908 Chmp7Q8R1T1 451 aa27.78■■■□□ 2.04
Ssbp4-201ENSMUST00000049908 Stk31Q99MW1 1018 aa27.78■■■□□ 2.04
Ssbp4-201ENSMUST00000049908 Aox2Q5SGK3 1345 aa27.77■■■□□ 2.04
Ssbp4-201ENSMUST00000049908 Crb1Q8VHS2 1405 aa27.77■■■□□ 2.04
Ssbp4-201ENSMUST00000049908 Mrs2Q5NCE8 434 aa27.76■■■□□ 2.03
Ssbp4-201ENSMUST00000049908 Atf7ipQ7TT18 1306 aa27.75■■■□□ 2.03
Ssbp4-201ENSMUST00000049908 Kiaa1107Q80TK0 1369 aa27.73■■■□□ 2.03
Ssbp4-201ENSMUST00000049908 Ints5Q8CHT3 1018 aa27.72■■■□□ 2.03
Ssbp4-201ENSMUST00000049908 Hdac6Q9Z2V5 1149 aa27.72■■■□□ 2.03
Ssbp4-201ENSMUST00000049908 Fchsd2Q3USJ8 740 aa27.71■■■□□ 2.03
Ssbp4-201ENSMUST00000049908 TmpoQ61033 693 aaKnown RBP27.71■■■□□ 2.03
Ssbp4-201ENSMUST00000049908 Tjp1P39447 1745 aaKnown RBP27.7■■■□□ 2.03
Ssbp4-201ENSMUST00000049908 Iqcf3Q9D498 203 aa27.7■■■□□ 2.02
Ssbp4-201ENSMUST00000049908 Ccdc85cE9Q6B2 420 aa27.69■■■□□ 2.02
Ssbp4-201ENSMUST00000049908 Kif23E9Q5G3 953 aa27.68■■■□□ 2.02
Ssbp4-201ENSMUST00000049908 Akt1s1Q9D1F4 257 aa27.68■■■□□ 2.02
Ssbp4-201ENSMUST00000049908 Trpm3Q5F4S9 1721 aa27.66■■■□□ 2.02
Ssbp4-201ENSMUST00000049908 Zscan21Q07231 555 aa27.66■■■□□ 2.02
Ssbp4-201ENSMUST00000049908 Fam198bQ3UPI1 517 aa27.66■■■□□ 2.02
Ssbp4-201ENSMUST00000049908 Cabp2Q9JLK4 216 aa27.65■■■□□ 2.02
Ssbp4-201ENSMUST00000049908 Tcerg1Q8CGF7 1100 aaKnown RBP27.64■■■□□ 2.02
Ssbp4-201ENSMUST00000049908 Gpr150Q8BL07 427 aa27.63■■■□□ 2.01
Ssbp4-201ENSMUST00000049908 Atg3Q9CPX6 314 aa27.63■■■□□ 2.01
Ssbp4-201ENSMUST00000049908 Q4VA45 678 aa27.62■■■□□ 2.01
Ssbp4-201ENSMUST00000049908 Jmjd4Q8BFT6 427 aa27.62■■■□□ 2.01
Ssbp4-201ENSMUST00000049908 Igsf1Q7TQA1 1317 aa27.62■■■□□ 2.01
Ssbp4-201ENSMUST00000049908 Nkx2-3P97334 362 aa27.61■■■□□ 2.01
Ssbp4-201ENSMUST00000049908 Bicdl1A0JNT9 577 aa27.6■■■□□ 2.01
Ssbp4-201ENSMUST00000049908 Ubr2Q6WKZ8 1755 aa27.6■■■□□ 2.01
Ssbp4-201ENSMUST00000049908 Snap23O09044 210 aa27.59■■■□□ 2.01
Ssbp4-201ENSMUST00000049908 Slc4a2P13808 1237 aaKnown RBP27.59■■■□□ 2.01
Ssbp4-201ENSMUST00000049908 PsdQ5DTT2 1024 aa27.58■■■□□ 2.01
Ssbp4-201ENSMUST00000049908 Ccdc155Q80VJ8 648 aa27.58■■■□□ 2.01
Ssbp4-201ENSMUST00000049908 CoblQ5NBX1 1337 aaKnown RBP27.58■■■□□ 2.01
Ssbp4-201ENSMUST00000049908 Abcc12Q80WJ6 1366 aa27.57■■■□□ 2
Ssbp4-201ENSMUST00000049908 Dcaf5Q80T85 946 aa27.57■■■□□ 2
Ssbp4-201ENSMUST00000049908 NrdcQ8BHG1 1161 aa27.56■■■□□ 2
Ssbp4-201ENSMUST00000049908 Mapk8ip3Q9ESN9 1337 aa27.54■■■□□ 2
Ssbp4-201ENSMUST00000049908 MeiocA2AG06 965 aa27.54■■■□□ 2
Ssbp4-201ENSMUST00000049908 Rtf1A2AQ19 715 aaKnown RBP27.54■■■□□ 2
Ssbp4-201ENSMUST00000049908 Apaf1O88879 1249 aa27.54■■■□□ 2
Ssbp4-201ENSMUST00000049908 En2P09066 324 aa27.54■■■□□ 2
Ssbp4-201ENSMUST00000049908 Cap2Q9CYT6 476 aa27.54■■■□□ 2
Ssbp4-201ENSMUST00000049908 Trpc5Q9QX29 975 aa27.54■■■□□ 2
Ssbp4-201ENSMUST00000049908 AtrnQ9WU60 1428 aa27.51■■□□□ 1.99
Ssbp4-201ENSMUST00000049908 Smg7Q5RJH6 1138 aaKnown RBP27.51■■□□□ 1.99
Ssbp4-201ENSMUST00000049908 Msh6P54276 1358 aaKnown RBP27.49■■□□□ 1.99
Ssbp4-201ENSMUST00000049908 AceP09470 1312 aa27.49■■□□□ 1.99
Ssbp4-201ENSMUST00000049908 Sos1Q62245 1319 aa27.49■■□□□ 1.99
Ssbp4-201ENSMUST00000049908 NppbP40753 121 aa27.49■■□□□ 1.99
Ssbp4-201ENSMUST00000049908 Gm13023A2A8N2 498 aa27.48■■□□□ 1.99
Ssbp4-201ENSMUST00000049908 Esx1O88933 382 aa27.48■■□□□ 1.99
Ssbp4-201ENSMUST00000049908 Magea1O89006 320 aa27.48■■□□□ 1.99
Ssbp4-201ENSMUST00000049908 Magea5O89009 320 aa27.48■■□□□ 1.99
Ssbp4-201ENSMUST00000049908 Smarcc1P97496 1104 aa27.48■■□□□ 1.99
Ssbp4-201ENSMUST00000049908 Ric1Q69ZJ7 1422 aa27.48■■□□□ 1.99
Ssbp4-201ENSMUST00000049908 Pcgf6Q99NA9 353 aa27.48■■□□□ 1.99
Ssbp4-201ENSMUST00000049908 Magea2Q9R2A2 320 aa27.48■■□□□ 1.99
Ssbp4-201ENSMUST00000049908 Map4k4P97820 1233 aaKnown RBP27.47■■□□□ 1.99
Ssbp4-201ENSMUST00000049908 Znf541Q0GGX2 1363 aa27.47■■□□□ 1.99
Ssbp4-201ENSMUST00000049908 Jdp2P97875 163 aa27.46■■□□□ 1.99
Ssbp4-201ENSMUST00000049908 Golga2Q921M4 999 aa27.46■■□□□ 1.99
Ssbp4-201ENSMUST00000049908 IncenpQ9WU62 880 aa27.46■■□□□ 1.99
Ssbp4-201ENSMUST00000049908 Efcab2Q9CQ46 164 aa27.45■■□□□ 1.99
Ssbp4-201ENSMUST00000049908 Miga2Q8BK03 593 aa27.44■■□□□ 1.98
Ssbp4-201ENSMUST00000049908 ErfeQ6PGN1 340 aa27.44■■□□□ 1.98
Ssbp4-201ENSMUST00000049908 Tiam2Q6ZPF3 1715 aa27.43■■□□□ 1.98
Ssbp4-201ENSMUST00000049908 Myo5bP21271 1818 aa27.43■■□□□ 1.98
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms