RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Ptch1Q61115 1434 aa18.05■□□□□ 0.48
Ushbp1-201ENSMUST00000049184 Vwa3bJ9JI28 736 aa18.04■□□□□ 0.48
Ushbp1-201ENSMUST00000049184 Fbxo2Q80UW2 297 aa18.03■□□□□ 0.48
Ushbp1-201ENSMUST00000049184 Atp1b4Q99ME6 356 aa18.03■□□□□ 0.48
Ushbp1-201ENSMUST00000049184 Cyp46a1Q9WVK8 500 aa18.03■□□□□ 0.48
Ushbp1-201ENSMUST00000049184 Ccdc173A0JLY1 547 aa18.02■□□□□ 0.48
Ushbp1-201ENSMUST00000049184 Cul9Q80TT8 1865 aa18.02■□□□□ 0.48
Ushbp1-201ENSMUST00000049184 Akap12Q9WTQ5 1684 aa18.02■□□□□ 0.48
Ushbp1-201ENSMUST00000049184 Tbc1d31Q6NXY1 996 aa18.02■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Ccdc94Q9D6J3 314 aa18.02■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Sos1Q62245 1319 aa18.02■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Kif24Q6NWW5 1356 aa18.01■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Ppp1r15aP17564 657 aa18.01■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 MsnP26041 577 aaKnown RBP18.01■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Olfml1Q8BSH2 233 aa18.01■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Prdm2A2A7B5 1709 aaKnown RBP18.01■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Cdk19Q8BWD8 501 aa18.01■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Rnf123Q5XPI3 1314 aa18.01■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Synj2Q9D2G5 1434 aa18■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Mroh1E0CZ22 1640 aa18■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Atg4a-psA0A0G2JFS9 396 aa18■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Kif3aP28741 701 aa18■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Atg4aQ8C9S8 396 aa18■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Bach2P97303 839 aa18■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Cabp2Q9JLK4 216 aa18■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Birc3O08863 600 aa17.99■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Filip1lQ6P6L0 1131 aa17.99■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 St18Q80TY4 1045 aa17.99■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Klhdc4Q921I2 584 aa17.99■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Grpel1Q99LP6 217 aa17.99■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Aifm3Q3TY86 605 aa17.99■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Shq1Q7TMX5 569 aa17.99■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Arhgap23Q69ZH9 1483 aa17.98■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Gli2Q0VGT2 1544 aa17.98■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Prkar2bP31324 416 aa17.98■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Nol11Q8BJW5 723 aaKnown RBP17.98■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Ythdc2B2RR83 1445 aaKnown RBP17.98■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Rtf1A2AQ19 715 aaKnown RBP17.98■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Atp6v1dP57746 247 aa17.98■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 AnlnQ8K298 1121 aaKnown RBP17.98■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 LlphQ9D945 130 aaKnown RBP17.98■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Ncbp1Q3UYV9 790 aaKnown RBP17.97■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Chmp4cQ9D7F7 232 aa17.97■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Ap3b2Q9JME5 1082 aa17.97■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Arid3cA6PWV5 409 aa17.97■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Cpa2Q504N0 417 aa17.97■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Atp2b2Q9R0K7 1198 aa17.97■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Phactr2B1AVP0 632 aa17.96■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Mcm10Q0VBD2 885 aa17.96■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Fam13bQ8K2H3 851 aa17.96■□□□□ 0.47
Ushbp1-201ENSMUST00000049184 Hvcn1Q3U2S8 269 aa17.96■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 Inpp5bQ8K337 993 aa17.96■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 Bcar3Q9QZK2 820 aa17.96■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 Mum1Q6DID5 682 aa17.95■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 Cep170bQ80U49 1574 aa17.95■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 Fam184aE9PW83 1143 aa17.94■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 MccE9PWI3 1003 aa17.94■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 Ptgs1P22437 602 aa17.94■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 CalcaP70160 136 aa17.94■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 Kiaa0753Q6A000 959 aa17.94■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 Tbc1d30Q69ZT9 766 aa17.94■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 Casc1Q6TDU8 730 aa17.94■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 Zkscan2G3X952 960 aa17.93■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 Cavin1O54724 392 aa17.93■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 Chl1P70232 1209 aa17.93■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 CltcQ68FD5 1675 aaKnown RBP17.93■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 Uhrf1bp1lA2RSJ4 1457 aa17.92■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 OvosQ3UU35 1456 aa17.92■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 Gm45140A0A0N4SUM8 220 aa17.92■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 Adcy5P84309 1262 aa17.92■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 RestQ8VIG1 1082 aa17.92■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 EvcP57680 1005 aa17.92■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 Utp14aQ640M1 767 aaKnown RBP17.92■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 Prune1Q8BIW1 454 aa17.92■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 Phf23Q8BSN5 401 aa17.92■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 Smarce1O54941 411 aaKnown RBP17.91■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 1700019A02RikA0A087WPV9 146 aa17.91■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 Anapc15P60007 132 aa17.9■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 Rsph6aQ8CDR2 708 aa17.9■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 Plin1Q8CGN5 517 aa17.9■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 Mx2Q9WVP9 655 aa17.9■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 PtprmP28828 1452 aa17.9■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 EzrP26040 586 aaKnown RBP17.9■□□□□ 0.46
Ushbp1-201ENSMUST00000049184 Prrc2bQ7TPM1 1486 aaKnown RBP17.89■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Cbx1P83917 185 aaKnown RBP17.89■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Nol8Q3UHX0 1147 aaKnown RBP17.89■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 KinQ8K339 391 aa17.89■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Ccar2Q8VDP4 922 aaKnown RBP17.89■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Hsp90b1P08113 802 aaKnown RBP17.89■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Rbm42Q91V81 474 aaKnown RBP17.89■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Hmox1P14901 289 aa17.88■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Ptpdc1Q6NZK8 747 aa17.88■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Zfp251Q6PCX8 632 aa17.88■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Nol12Q8BG17 217 aa17.88■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Knl1Q66JQ7 1612 aa17.88■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Fam43aQ8BUP8 424 aa17.88■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Serpina10Q8R121 448 aa17.88■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Map3k19E9Q3S4 1311 aa17.87■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Atp10aO54827 1508 aa17.87■□□□□ 0.45
Ushbp1-201ENSMUST00000049184 Kank4Q6P9J5 1016 aa17.87■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 35.8 ms