RNA–Protein interactions for RNA: ENSMUST00000039007.6

Trp53rka-201, Transcript of MCG14616, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trp53rka, Length 1,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53rka-201ENSMUST00000039007 Larp1bA0A0A6YXJ7 370 aaKnown RBP26.61■■□□□ 1.85
Trp53rka-201ENSMUST00000039007 Taok3Q8BYC6 898 aa26.61■■□□□ 1.85
Trp53rka-201ENSMUST00000039007 Golga2Q921M4 999 aa26.61■■□□□ 1.85
Trp53rka-201ENSMUST00000039007 Esx1O88933 382 aa26.6■■□□□ 1.85
Trp53rka-201ENSMUST00000039007 Map4k4P97820 1233 aaKnown RBP26.6■■□□□ 1.85
Trp53rka-201ENSMUST00000039007 Iqcf3Q9D498 203 aa26.6■■□□□ 1.85
Trp53rka-201ENSMUST00000039007 Mapk8ip3Q9ESN9 1337 aa26.6■■□□□ 1.85
Trp53rka-201ENSMUST00000039007 Amotl1Q9D4H4 968 aa26.59■■□□□ 1.85
Trp53rka-201ENSMUST00000039007 Elp1Q7TT37 1333 aaKnown RBP26.59■■□□□ 1.85
Trp53rka-201ENSMUST00000039007 Speer4bQ9D9F7 267 aa26.59■■□□□ 1.85
Trp53rka-201ENSMUST00000039007 Gm21680A0A0G2JGR8 267 aa26.58■■□□□ 1.85
Trp53rka-201ENSMUST00000039007 Apaf1O88879 1249 aa26.58■■□□□ 1.85
Trp53rka-201ENSMUST00000039007 Q4VA45 678 aa26.58■■□□□ 1.85
Trp53rka-201ENSMUST00000039007 Ly75Q60767 1723 aa26.57■■□□□ 1.84
Trp53rka-201ENSMUST00000039007 MpndQ3TV65 487 aa26.56■■□□□ 1.84
Trp53rka-201ENSMUST00000039007 4930523C07RikE9Q2T4 99 aa26.55■■□□□ 1.84
Trp53rka-201ENSMUST00000039007 Zfp444Q3TDV8 331 aaKnown RBP26.55■■□□□ 1.84
Trp53rka-201ENSMUST00000039007 Cabp2Q9JLK4 216 aa26.55■■□□□ 1.84
Trp53rka-201ENSMUST00000039007 Znf541Q0GGX2 1363 aa26.55■■□□□ 1.84
Trp53rka-201ENSMUST00000039007 Trpm3Q5F4S9 1721 aa26.55■■□□□ 1.84
Trp53rka-201ENSMUST00000039007 TmpoQ61033 693 aaKnown RBP26.55■■□□□ 1.84
Trp53rka-201ENSMUST00000039007 Tns2Q8CGB6 1400 aa26.55■■□□□ 1.84
Trp53rka-201ENSMUST00000039007 Sugp2Q8CH09 1067 aa26.51■■□□□ 1.83
Trp53rka-201ENSMUST00000039007 Eif3bQ8JZQ9 803 aaKnown RBP26.51■■□□□ 1.83
Trp53rka-201ENSMUST00000039007 Ppp6r1Q7TSI3 856 aa26.51■■□□□ 1.83
Trp53rka-201ENSMUST00000039007 Ttc41Q692V3 1318 aa26.5■■□□□ 1.83
Trp53rka-201ENSMUST00000039007 Supt16hQ920B9 1047 aa26.5■■□□□ 1.83
Trp53rka-201ENSMUST00000039007 Phkg2Q9DB30 406 aa26.49■■□□□ 1.83
Trp53rka-201ENSMUST00000039007 Usp19Q3UJD6 1360 aa26.48■■□□□ 1.83
Trp53rka-201ENSMUST00000039007 Aox2Q5SGK3 1345 aa26.48■■□□□ 1.83
Trp53rka-201ENSMUST00000039007 Cavin4A2AMM0 362 aa26.48■■□□□ 1.83
Trp53rka-201ENSMUST00000039007 Kiaa0319Q5SZV5 1081 aa26.48■■□□□ 1.83
Trp53rka-201ENSMUST00000039007 Larp1Q6ZQ58 1072 aaKnown RBP26.48■■□□□ 1.83
Trp53rka-201ENSMUST00000039007 Col22a1E9Q7P1 1613 aa26.47■■□□□ 1.83
Trp53rka-201ENSMUST00000039007 Erbb3Q61526 1339 aa26.46■■□□□ 1.83
Trp53rka-201ENSMUST00000039007 GakQ99KY4 1305 aa26.46■■□□□ 1.83
Trp53rka-201ENSMUST00000039007 Zcrb1Q9CZ96 217 aaKnown RBP26.46■■□□□ 1.83
Trp53rka-201ENSMUST00000039007 Pdzd9Q9D9M4 266 aa26.46■■□□□ 1.83
Trp53rka-201ENSMUST00000039007 Uspl1Q3ULM6 1089 aa26.45■■□□□ 1.83
Trp53rka-201ENSMUST00000039007 PappaQ8R4K8 1624 aa26.44■■□□□ 1.82
Trp53rka-201ENSMUST00000039007 Gm21663A0A0G2JE01 267 aa26.44■■□□□ 1.82
Trp53rka-201ENSMUST00000039007 Gm7361D3Z6R1 267 aa26.44■■□□□ 1.82
Trp53rka-201ENSMUST00000039007 5031410I06RikE9Q4E0 267 aa26.44■■□□□ 1.82
Trp53rka-201ENSMUST00000039007 Gm1979E9QAN3 267 aa26.44■■□□□ 1.82
Trp53rka-201ENSMUST00000039007 Gm5862K7N5V5 267 aa26.44■■□□□ 1.82
Trp53rka-201ENSMUST00000039007 Gm10220K7N660 267 aa26.44■■□□□ 1.82
Trp53rka-201ENSMUST00000039007 Chmp7Q8R1T1 451 aa26.44■■□□□ 1.82
Trp53rka-201ENSMUST00000039007 Ciz1Q8VEH2 845 aa26.44■■□□□ 1.82
Trp53rka-201ENSMUST00000039007 Ubap1lG3UW59 384 aa26.43■■□□□ 1.82
Trp53rka-201ENSMUST00000039007 Ssfa2Q922B9 1252 aa26.43■■□□□ 1.82
Trp53rka-201ENSMUST00000039007 Rtf1A2AQ19 715 aaKnown RBP26.42■■□□□ 1.82
Trp53rka-201ENSMUST00000039007 Slc5a1Q8C3K6 665 aa26.42■■□□□ 1.82
Trp53rka-201ENSMUST00000039007 Asic4Q7TNS7 539 aa26.41■■□□□ 1.82
Trp53rka-201ENSMUST00000039007 Swt1Q9DBQ9 907 aa26.4■■□□□ 1.82
Trp53rka-201ENSMUST00000039007 Uhrf1bp1B2KF50 1429 aa26.39■■□□□ 1.82
Trp53rka-201ENSMUST00000039007 Snap23O09044 210 aa26.39■■□□□ 1.82
Trp53rka-201ENSMUST00000039007 Dusp27Q148W8 1138 aa26.39■■□□□ 1.82
Trp53rka-201ENSMUST00000039007 Lrit1Q8K099 624 aa26.39■■□□□ 1.82
Trp53rka-201ENSMUST00000039007 Rgs17Q9QZB0 210 aa26.39■■□□□ 1.82
Trp53rka-201ENSMUST00000039007 Ppfibp2O35711 882 aa26.38■■□□□ 1.81
Trp53rka-201ENSMUST00000039007 ApobrQ8VBT6 942 aa26.38■■□□□ 1.81
Trp53rka-201ENSMUST00000039007 Abcc12Q80WJ6 1366 aa26.37■■□□□ 1.81
Trp53rka-201ENSMUST00000039007 Bsdc1Q80Y55 427 aa26.36■■□□□ 1.81
Trp53rka-201ENSMUST00000039007 Ncbp3Q8BZR9 615 aaKnown RBP26.36■■□□□ 1.81
Trp53rka-201ENSMUST00000039007 CrbnQ8C7D2 445 aa26.35■■□□□ 1.81
Trp53rka-201ENSMUST00000039007 Nsd3Q6P2L6 1439 aa26.34■■□□□ 1.81
Trp53rka-201ENSMUST00000039007 Ccnl1Q52KE7 532 aaKnown RBP26.34■■□□□ 1.81
Trp53rka-201ENSMUST00000039007 Mbd3Q9Z2D8 285 aaKnown RBP26.34■■□□□ 1.81
Trp53rka-201ENSMUST00000039007 Sos1Q62245 1319 aa26.34■■□□□ 1.81
Trp53rka-201ENSMUST00000039007 Prkrip1Q9CWV6 186 aaKnown RBP26.34■■□□□ 1.81
Trp53rka-201ENSMUST00000039007 GalcP54818 684 aa26.33■■□□□ 1.81
Trp53rka-201ENSMUST00000039007 Pnpla7A2AJ88 1352 aa26.33■■□□□ 1.8
Trp53rka-201ENSMUST00000039007 Myo5bP21271 1818 aa26.32■■□□□ 1.8
Trp53rka-201ENSMUST00000039007 Ubr2Q6WKZ8 1755 aa26.32■■□□□ 1.8
Trp53rka-201ENSMUST00000039007 NeflP08551 543 aa26.32■■□□□ 1.8
Trp53rka-201ENSMUST00000039007 Liat1Q810M6 228 aa26.32■■□□□ 1.8
Trp53rka-201ENSMUST00000039007 Crb1Q8VHS2 1405 aa26.31■■□□□ 1.8
Trp53rka-201ENSMUST00000039007 Ccdc6D3YZP9 469 aa26.31■■□□□ 1.8
Trp53rka-201ENSMUST00000039007 Afg3l2Q8JZQ2 802 aaKnown RBP26.31■■□□□ 1.8
Trp53rka-201ENSMUST00000039007 Nkx2-3P97334 362 aa26.3■■□□□ 1.8
Trp53rka-201ENSMUST00000039007 Adamtsl1Q8BLI0 1745 aa26.3■■□□□ 1.8
Trp53rka-201ENSMUST00000039007 Tjp1P39447 1745 aaKnown RBP26.3■■□□□ 1.8
Trp53rka-201ENSMUST00000039007 Arhgap33Q80YF9 1305 aa26.28■■□□□ 1.8
Trp53rka-201ENSMUST00000039007 Rad21Q61550 635 aaKnown RBP26.28■■□□□ 1.8
Trp53rka-201ENSMUST00000039007 Ints5Q8CHT3 1018 aa26.28■■□□□ 1.8
Trp53rka-201ENSMUST00000039007 Speer4f1Q9D5Q6 258 aa26.28■■□□□ 1.8
Trp53rka-201ENSMUST00000039007 Rps6ka4Q9Z2B9 773 aa26.28■■□□□ 1.8
Trp53rka-201ENSMUST00000039007 Abca3Q8R420 1704 aa26.28■■□□□ 1.8
Trp53rka-201ENSMUST00000039007 Ccdc155Q80VJ8 648 aa26.27■■□□□ 1.8
Trp53rka-201ENSMUST00000039007 Shank3Q4ACU6 1730 aa26.26■■□□□ 1.79
Trp53rka-201ENSMUST00000039007 Ralbp1Q62172 648 aa26.25■■□□□ 1.79
Trp53rka-201ENSMUST00000039007 Sos2Q02384 1333 aa26.24■■□□□ 1.79
Trp53rka-201ENSMUST00000039007 Hdac6Q9Z2V5 1149 aa26.23■■□□□ 1.79
Trp53rka-201ENSMUST00000039007 Plekhh1Q80TI1 1356 aa26.23■■□□□ 1.79
Trp53rka-201ENSMUST00000039007 Vars2Q3U2A8 1060 aa26.23■■□□□ 1.79
Trp53rka-201ENSMUST00000039007 Neurod2Q62414 383 aa26.23■■□□□ 1.79
Trp53rka-201ENSMUST00000039007 Klc3Q91W40 508 aa26.22■■□□□ 1.79
Trp53rka-201ENSMUST00000039007 Atxn3Q9CVD2 355 aa26.21■■□□□ 1.79
Trp53rka-201ENSMUST00000039007 Ggnbp2Q5SV77 696 aa26.21■■□□□ 1.79
Trp53rka-201ENSMUST00000039007 Btbd11Q6GQW0 1109 aa26.21■■□□□ 1.79
Retrieved 100 of 22,080 RNA–protein pairs in 16.3 ms