RNA–Protein interactions for RNA: ENSMUST00000035237.11

Usp4-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp4, Length 3,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-201ENSMUST00000035237 Wdr78E9PYY5 807 aa18.22■□□□□ 0.51
Usp4-201ENSMUST00000035237 Ppp1r15aP17564 657 aa18.22■□□□□ 0.51
Usp4-201ENSMUST00000035237 Sox12Q04890 314 aa18.22■□□□□ 0.51
Usp4-201ENSMUST00000035237 EappQ5BU09 281 aa18.22■□□□□ 0.51
Usp4-201ENSMUST00000035237 Naa30Q8CES0 364 aa18.22■□□□□ 0.51
Usp4-201ENSMUST00000035237 Itsn2Q9Z0R6 1659 aa18.22■□□□□ 0.51
Usp4-201ENSMUST00000035237 Iqsec2Q5DU25 1478 aa18.22■□□□□ 0.51
Usp4-201ENSMUST00000035237 Pik3r4Q8VD65 1358 aa18.21■□□□□ 0.51
Usp4-201ENSMUST00000035237 TimelessQ9R1X4 1197 aa18.21■□□□□ 0.51
Usp4-201ENSMUST00000035237 Gm45015A0A140LII9 184 aa18.21■□□□□ 0.51
Usp4-201ENSMUST00000035237 Gm18336A0A140LIU8 765 aa18.21■□□□□ 0.51
Usp4-201ENSMUST00000035237 Dixdc1Q80Y83 711 aa18.21■□□□□ 0.51
Usp4-201ENSMUST00000035237 Ppp1r42Q8R1Z4 357 aa18.21■□□□□ 0.51
Usp4-201ENSMUST00000035237 Elp1Q7TT37 1333 aaKnown RBP18.2■□□□□ 0.5
Usp4-201ENSMUST00000035237 EzrP26040 586 aaKnown RBP18.2■□□□□ 0.5
Usp4-201ENSMUST00000035237 Hvcn1Q3U2S8 269 aa18.2■□□□□ 0.5
Usp4-201ENSMUST00000035237 Ints3Q7TPD0 1041 aaKnown RBP18.2■□□□□ 0.5
Usp4-201ENSMUST00000035237 Cspp1B2RX88 1205 aa18.2■□□□□ 0.5
Usp4-201ENSMUST00000035237 Mrps27Q8BK72 415 aaKnown RBP18.2■□□□□ 0.5
Usp4-201ENSMUST00000035237 Gm32742A0A1B0GT42 1604 aa18.2■□□□□ 0.5
Usp4-201ENSMUST00000035237 Atg4a-psA0A0G2JFS9 396 aa18.2■□□□□ 0.5
Usp4-201ENSMUST00000035237 Atg4aQ8C9S8 396 aa18.2■□□□□ 0.5
Usp4-201ENSMUST00000035237 Fmnl2A2APV2 1086 aa18.19■□□□□ 0.5
Usp4-201ENSMUST00000035237 Zdhhc9P59268 364 aa18.19■□□□□ 0.5
Usp4-201ENSMUST00000035237 Frmd3Q8BHD4 595 aa18.19■□□□□ 0.5
Usp4-201ENSMUST00000035237 Ncbp3Q8BZR9 615 aaKnown RBP18.19■□□□□ 0.5
Usp4-201ENSMUST00000035237 Plppr3Q7TPB0 716 aa18.19■□□□□ 0.5
Usp4-201ENSMUST00000035237 Nol11Q8BJW5 723 aaKnown RBP18.18■□□□□ 0.5
Usp4-201ENSMUST00000035237 Skint5A7XUY5 1461 aa18.18■□□□□ 0.5
Usp4-201ENSMUST00000035237 CatipB9EKE5 520 aa18.18■□□□□ 0.5
Usp4-201ENSMUST00000035237 Bach1P97302 739 aa18.18■□□□□ 0.5
Usp4-201ENSMUST00000035237 LlphQ9D945 130 aaKnown RBP18.18■□□□□ 0.5
Usp4-201ENSMUST00000035237 Nap1l3Q794H2 544 aa18.17■□□□□ 0.5
Usp4-201ENSMUST00000035237 Dhx30Q99PU8 1217 aaKnown RBP18.17■□□□□ 0.5
Usp4-201ENSMUST00000035237 Sos1Q62245 1319 aa18.17■□□□□ 0.5
Usp4-201ENSMUST00000035237 Nom1Q3UFM5 854 aaKnown RBP18.17■□□□□ 0.5
Usp4-201ENSMUST00000035237 RestQ8VIG1 1082 aa18.17■□□□□ 0.5
Usp4-201ENSMUST00000035237 Tomm22Q9CPQ3 142 aa18.17■□□□□ 0.5
Usp4-201ENSMUST00000035237 Slx4ipQ9D7Y9 413 aa18.17■□□□□ 0.5
Usp4-201ENSMUST00000035237 Lekr1B2RVN1 116 aa18.17■□□□□ 0.5
Usp4-201ENSMUST00000035237 Fam184aE9PW83 1143 aa18.17■□□□□ 0.5
Usp4-201ENSMUST00000035237 TmpoQ61033 693 aaKnown RBP18.17■□□□□ 0.5
Usp4-201ENSMUST00000035237 Naip7Q9JIB3 1402 aa18.16■□□□□ 0.5
Usp4-201ENSMUST00000035237 MecomP14404 1042 aa18.16■□□□□ 0.5
Usp4-201ENSMUST00000035237 Psme1P97371 249 aa18.16■□□□□ 0.5
Usp4-201ENSMUST00000035237 Anp32cQ64G17 123 aa18.16■□□□□ 0.5
Usp4-201ENSMUST00000035237 Txndc2Q6P902 515 aa18.16■□□□□ 0.5
Usp4-201ENSMUST00000035237 Mmel1Q9JLI3 765 aa18.16■□□□□ 0.5
Usp4-201ENSMUST00000035237 Iffo2Q8R2V2 512 aa18.16■□□□□ 0.5
Usp4-201ENSMUST00000035237 Sh3bgrQ9WUZ7 214 aa18.16■□□□□ 0.5
Usp4-201ENSMUST00000035237 Cep152A2AUM9 1736 aaKnown RBP18.15■□□□□ 0.5
Usp4-201ENSMUST00000035237 F2rP30558 430 aa18.15■□□□□ 0.5
Usp4-201ENSMUST00000035237 Zhx1P70121 873 aa18.15■□□□□ 0.5
Usp4-201ENSMUST00000035237 Cnnm3Q32NY4 713 aa18.15■□□□□ 0.5
Usp4-201ENSMUST00000035237 Tceal9Q9DD24 104 aa18.15■□□□□ 0.5
Usp4-201ENSMUST00000035237 Bms1Q6PGF5 1284 aaKnown RBP18.14■□□□□ 0.5
Usp4-201ENSMUST00000035237 Gjb2Q00977 226 aa18.14■□□□□ 0.49
Usp4-201ENSMUST00000035237 Grpel1Q99LP6 217 aa18.14■□□□□ 0.49
Usp4-201ENSMUST00000035237 CebpzP53569 1052 aaKnown RBP18.13■□□□□ 0.49
Usp4-201ENSMUST00000035237 Fam83gQ5SWY7 812 aa18.13■□□□□ 0.49
Usp4-201ENSMUST00000035237 Cabp4Q8VHC5 271 aa18.13■□□□□ 0.49
Usp4-201ENSMUST00000035237 Ccdc94Q9D6J3 314 aa18.13■□□□□ 0.49
Usp4-201ENSMUST00000035237 Bach2P97303 839 aa18.13■□□□□ 0.49
Usp4-201ENSMUST00000035237 Znf608Q56A10 1511 aa18.13■□□□□ 0.49
Usp4-201ENSMUST00000035237 Fam43aQ8BUP8 424 aa18.13■□□□□ 0.49
Usp4-201ENSMUST00000035237 Talpid3E9PV87 1520 aa18.13■□□□□ 0.49
Usp4-201ENSMUST00000035237 Larp1bA0A0A6YXJ7 370 aaKnown RBP18.12■□□□□ 0.49
Usp4-201ENSMUST00000035237 Prim1P20664 417 aa18.12■□□□□ 0.49
Usp4-201ENSMUST00000035237 Ccdc178Q8CDV0 866 aa18.12■□□□□ 0.49
Usp4-201ENSMUST00000035237 Bicd2Q921C5 820 aa18.12■□□□□ 0.49
Usp4-201ENSMUST00000035237 FosbP13346 338 aa18.12■□□□□ 0.49
Usp4-201ENSMUST00000035237 Ptgs1P22437 602 aa18.12■□□□□ 0.49
Usp4-201ENSMUST00000035237 Cavin2Q63918 418 aaKnown RBP18.12■□□□□ 0.49
Usp4-201ENSMUST00000035237 Snx13Q6PHS6 957 aa18.12■□□□□ 0.49
Usp4-201ENSMUST00000035237 Rsph6aQ8CDR2 708 aa18.12■□□□□ 0.49
Usp4-201ENSMUST00000035237 Pnma3Q8JZW8 466 aa18.11■□□□□ 0.49
Usp4-201ENSMUST00000035237 Sass6Q80UK7 654 aa18.11■□□□□ 0.49
Usp4-201ENSMUST00000035237 Med4Q9CQA5 270 aa18.11■□□□□ 0.49
Usp4-201ENSMUST00000035237 Rnf17Q99MV7 1640 aa18.11■□□□□ 0.49
Usp4-201ENSMUST00000035237 Cfap73J3QPZ5 306 aa18.11■□□□□ 0.49
Usp4-201ENSMUST00000035237 Tm6sf1P58749 370 aa18.11■□□□□ 0.49
Usp4-201ENSMUST00000035237 Idi2Q8BFZ6 227 aa18.11■□□□□ 0.49
Usp4-201ENSMUST00000035237 Stx6Q9JKK1 255 aa18.11■□□□□ 0.49
Usp4-201ENSMUST00000035237 Hfm1D3Z4R1 1434 aa18.1■□□□□ 0.49
Usp4-201ENSMUST00000035237 ShprhQ7TPQ3 1674 aa18.1■□□□□ 0.49
Usp4-201ENSMUST00000035237 Adgrl3Q80TS3 1537 aa18.1■□□□□ 0.49
Usp4-201ENSMUST00000035237 Aldh1l2Q8K009 923 aa18.1■□□□□ 0.49
Usp4-201ENSMUST00000035237 Dnmt1P13864 1620 aaKnown RBP18.1■□□□□ 0.49
Usp4-201ENSMUST00000035237 Uggt2E9Q4X2 1504 aa18.1■□□□□ 0.49
Usp4-201ENSMUST00000035237 Rassf8Q8CJ96 419 aa18.1■□□□□ 0.49
Usp4-201ENSMUST00000035237 Vwa3bJ9JI28 736 aa18.09■□□□□ 0.49
Usp4-201ENSMUST00000035237 Pdzrn3Q69ZS0 1063 aa18.09■□□□□ 0.49
Usp4-201ENSMUST00000035237 Nup88Q8CEC0 753 aaKnown RBP18.09■□□□□ 0.49
Usp4-201ENSMUST00000035237 Robo2Q7TPD3 1470 aa18.09■□□□□ 0.49
Usp4-201ENSMUST00000035237 Abcc1O35379 1528 aa18.09■□□□□ 0.49
Usp4-201ENSMUST00000035237 Cdc42bpbQ7TT50 1713 aa18.09■□□□□ 0.49
Usp4-201ENSMUST00000035237 Taf3Q5HZG4 932 aa18.09■□□□□ 0.49
Usp4-201ENSMUST00000035237 Q9D9S1 216 aa18.09■□□□□ 0.49
Usp4-201ENSMUST00000035237 Cfdp1O88271 295 aaKnown RBP18.08■□□□□ 0.49
Usp4-201ENSMUST00000035237 Cchcr1Q8K2I2 770 aa18.08■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms