RNA–Protein interactions for RNA: ENSMUST00000033898.9

Col4a1-201, Transcript of Collagen alpha-1(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a1, Length 6,615 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1-201ENSMUST00000033898 Cfap58B2RW38 873 aa16.79■□□□□ 0.28
Col4a1-201ENSMUST00000033898 CalrP14211 416 aaKnown RBP16.79■□□□□ 0.28
Col4a1-201ENSMUST00000033898 AidaQ8C4Q6 305 aa16.79■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Pof1bQ8K4L4 587 aa16.79■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Syce3B5KM66 88 aa16.79■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Map9Q3TRR0 646 aa16.79■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Ctnnbl1Q9CWL8 563 aaKnown RBP16.79■□□□□ 0.28
Col4a1-201ENSMUST00000033898 HnrnpmQ9D0E1 729 aaKnown RBP16.79■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Atp2b1G5E829 1220 aa16.79■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Pafah1b1P63005 410 aaKnown RBP16.79■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Ercc6lQ8BHK9 1240 aa16.79■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Cacna2d4Q5RJF7 1116 aa16.79■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Sh3d21Q7TSG5 549 aa16.79■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Zbtb21E9Q444 1094 aa16.78■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Cep57l1Q8VDS7 400 aa16.78■□□□□ 0.28
Col4a1-201ENSMUST00000033898 L1td1Q587J6 782 aaKnown RBP16.78■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Rnf34Q99KR6 376 aa16.78■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Ripk4Q9ERK0 786 aa16.78■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Lman1Q9D0F3 517 aa16.78■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Nlrp3Q8R4B8 1033 aa16.78■□□□□ 0.28
Col4a1-201ENSMUST00000033898 CarsQ9ER72 831 aaKnown RBP16.78■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Synj1Q8CHC4 1574 aa16.78■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Ssh1Q76I79 1042 aa16.78■□□□□ 0.28
Col4a1-201ENSMUST00000033898 4930572O03RikQ8C5Y0 211 aa16.78■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Gimap6Q8K349 305 aa16.78■□□□□ 0.28
Col4a1-201ENSMUST00000033898 TkfcQ8VC30 578 aa16.78■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Cd109Q8R422 1442 aa16.78■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Trim55G3X8Y1 545 aa16.77■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Lmbr1Q9JIT0 490 aa16.77■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Cfap45Q9D9U9 551 aa16.77■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Knop1Q9Z2Q2 478 aaKnown RBP16.77■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Rhot2Q8JZN7 620 aa16.77■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Tspyl3Q3UYP3 334 aa16.77■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Sycp2Q9CUU3 1500 aa16.77■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Slc4a2P13808 1237 aaKnown RBP16.76■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Jade2Q6ZQF7 829 aa16.76■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Gjc1P28229 396 aa16.76■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Slc26a8Q8R0C3 999 aa16.76■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Wdhd1P59328 1117 aa16.76■□□□□ 0.27
Col4a1-201ENSMUST00000033898 TchpQ3TVW5 497 aa16.76■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Map2k1P31938 393 aa16.75■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Ppfia3P60469 1194 aa16.75■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Ncapg2Q6DFV1 1138 aa16.75■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Paxip1Q6NZQ4 1056 aa16.75■□□□□ 0.27
Col4a1-201ENSMUST00000033898 TxlnaQ6PAM1 554 aaKnown RBP16.75■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Ccdc172Q810N9 267 aa16.75■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Polr3dQ91WD1 398 aa16.75■□□□□ 0.27
Col4a1-201ENSMUST00000033898 2310002L09RikQ9D7L5 217 aa16.75■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Dph6Q9CQ28 267 aa16.75■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Cyb5rlB1AS42 316 aa16.74■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Rbm19Q8R3C6 952 aaKnown RBP16.74■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Ca8P28651 291 aa16.74■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Cep131Q62036 1060 aa16.74■□□□□ 0.27
Col4a1-201ENSMUST00000033898 ImmtQ8CAQ8 757 aaKnown RBP16.74■□□□□ 0.27
Col4a1-201ENSMUST00000033898 SlmapQ3URD3 845 aa16.73■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Plekhg5Q66T02 1073 aa16.73■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Znf692Q3U381 531 aa16.73■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Maco1Q7TQE6 664 aaKnown RBP16.73■□□□□ 0.27
Col4a1-201ENSMUST00000033898 GpkowQ56A08 488 aa16.73■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Nsrp1Q5NCR9 542 aa16.73■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Ccdc155Q80VJ8 648 aa16.73■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Tmx1Q8VBT0 278 aa16.73■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Wasf1Q8R5H6 559 aa16.72■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Med4Q9CQA5 270 aa16.72■□□□□ 0.27
Col4a1-201ENSMUST00000033898 CftrP26361 1476 aa16.72■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Tubb6Q922F4 447 aa16.72■□□□□ 0.27
Col4a1-201ENSMUST00000033898 ZwintQ9CQU5 252 aa16.72■□□□□ 0.27
Col4a1-201ENSMUST00000033898 MvpQ9EQK5 861 aa16.71■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Ppp6r1Q7TSI3 856 aa16.71■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Zbtb3Q91X45 518 aa16.71■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Mcm3P25206 812 aaKnown RBP16.71■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Znf653Q6YND2 615 aa16.71■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Cep55Q8BT07 462 aa16.71■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Cux1P53564 1515 aa16.71■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Txndc16Q7TN22 820 aa16.7■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Cct2P80314 535 aaKnown RBP16.7■□□□□ 0.26
Col4a1-201ENSMUST00000033898 MicalclQ9D5U9 680 aa16.7■□□□□ 0.26
Col4a1-201ENSMUST00000033898 TmpoQ61033 693 aaKnown RBP16.7■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Tsg101Q61187 391 aa16.7■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Ccdc112A0AUP1 442 aa16.69■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Sptbn5F6UCX4 1208 aa16.69■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Aplp1Q03157 653 aa16.69■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Spag5Q7TME2 1165 aa16.69■□□□□ 0.26
Col4a1-201ENSMUST00000033898 NapbP28663 298 aa16.69■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Lrrfip1Q3UZ39 729 aaKnown RBP16.69■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Tspyl2Q7TQI8 677 aa16.69■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Nap1l2P51860 460 aa16.69■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Cbx1P83917 185 aaKnown RBP16.69■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Paip2Q9D6V8 124 aa16.69■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Nap1l5Q9JJF0 156 aa16.69■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Fez1Q8K0X8 392 aa16.69■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Ttc5Q99LG4 440 aa16.69■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Cc2d2aQ8CFW7 1633 aa16.68■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Ift140E9PY46 1464 aa16.68■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Riok1Q922Q2 567 aa16.68■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Larp6Q8BN59 492 aa16.68■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Otud6bQ8K2H2 294 aa16.68■□□□□ 0.26
Col4a1-201ENSMUST00000033898 NsmfQ99NF2 532 aa16.68■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Exoc8Q6PGF7 716 aa16.68■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Dact3Q0PHV7 610 aa16.67■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms