RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 TTLL8A6PVC2 850 aa20.74■□□□□ 0.91
CHKA-206ENST00000531341 FGF5P12034 268 aa20.74■□□□□ 0.91
CHKA-206ENST00000531341 GZMAP12544 262 aa20.74■□□□□ 0.91
CHKA-206ENST00000531341 AMD1P17707 334 aa20.74■□□□□ 0.91
CHKA-206ENST00000531341 SERPINB6P35237 376 aa20.74■□□□□ 0.91
CHKA-206ENST00000531341 GARSP41250 739 aaKnown RBP20.74■□□□□ 0.91
CHKA-206ENST00000531341 CLCNKAP51800 687 aa20.74■□□□□ 0.91
CHKA-206ENST00000531341 SEMA5AQ13591 1074 aa20.74■□□□□ 0.91
CHKA-206ENST00000531341 DNASE1L3Q13609 305 aa20.74■□□□□ 0.91
CHKA-206ENST00000531341 IL11RAQ14626 422 aa20.74■□□□□ 0.91
CHKA-206ENST00000531341 QPCTQ16769 361 aa20.74■□□□□ 0.91
CHKA-206ENST00000531341 FHL5Q5TD97 284 aa20.74■□□□□ 0.91
CHKA-206ENST00000531341 PHYKPLQ8IUZ5 450 aa20.74■□□□□ 0.91
CHKA-206ENST00000531341 AOPEPQ8N6M6 819 aa20.74■□□□□ 0.91
CHKA-206ENST00000531341 CPT1CQ8TCG5 803 aa20.74■□□□□ 0.91
CHKA-206ENST00000531341 CT55Q8WUE5 264 aa20.74■□□□□ 0.91
CHKA-206ENST00000531341 UCK1Q9HA47 277 aa20.74■□□□□ 0.91
CHKA-206ENST00000531341 RCOR3Q9P2K3 495 aaPredicted RBP20.74■□□□□ 0.91
CHKA-206ENST00000531341 LNPEPQ9UIQ6 1025 aa20.74■□□□□ 0.91
CHKA-206ENST00000531341 SCINQ9Y6U3 715 aa20.74■□□□□ 0.91
CHKA-206ENST00000531341 GOLGA6L3A6NEY3 463 aa20.73■□□□□ 0.91
CHKA-206ENST00000531341 MATN3O15232 486 aa20.73■□□□□ 0.91
CHKA-206ENST00000531341 RASSF9O75901 435 aa20.73■□□□□ 0.91
CHKA-206ENST00000531341 VIPP01282 170 aa20.73■□□□□ 0.91
CHKA-206ENST00000531341 HLA-DQB2P05538 268 aa20.73■□□□□ 0.91
CHKA-206ENST00000531341 BRAFP15056 766 aa20.73■□□□□ 0.91
CHKA-206ENST00000531341 CDK11BP21127 795 aaKnown RBP20.73■□□□□ 0.91
CHKA-206ENST00000531341 MYL5Q02045 173 aa20.73■□□□□ 0.91
CHKA-206ENST00000531341 SLC25A11Q02978 314 aaKnown RBP20.73■□□□□ 0.91
CHKA-206ENST00000531341 GALNT2Q10471 571 aa20.73■□□□□ 0.91
CHKA-206ENST00000531341 SEPT7Q16181 437 aaKnown RBP20.73■□□□□ 0.91
CHKA-206ENST00000531341 NADK2Q4G0N4 442 aa20.73■□□□□ 0.91
CHKA-206ENST00000531341 NCBP2-AS2Q69YL0 99 aa20.73■□□□□ 0.91
CHKA-206ENST00000531341 FAM199XQ6PEV8 388 aaPredicted RBP20.73■□□□□ 0.91
CHKA-206ENST00000531341 CRTC3Q6UUV7 619 aa20.73■□□□□ 0.91
CHKA-206ENST00000531341 FAM92BQ6ZTR7 304 aa20.73■□□□□ 0.91
CHKA-206ENST00000531341 ADGRG6Q86SQ4 1221 aa20.73■□□□□ 0.91
CHKA-206ENST00000531341 APLFQ8IW19 511 aaPredicted RBP20.73■□□□□ 0.91
CHKA-206ENST00000531341 RAVER1Q8IY67 606 aaKnown RBP20.73■□□□□ 0.91
CHKA-206ENST00000531341 ANKRD20A12PQ8NF67 263 aa20.73■□□□□ 0.91
CHKA-206ENST00000531341 KLHL6Q8WZ60 621 aa20.73■□□□□ 0.91
CHKA-206ENST00000531341 LHX9Q9NQ69 397 aa20.73■□□□□ 0.91
CHKA-206ENST00000531341 KCND3Q9UK17 655 aa20.73■□□□□ 0.91
CHKA-206ENST00000531341 PADI1Q9ULC6 663 aa20.73■□□□□ 0.91
CHKA-206ENST00000531341 DNAJC16Q9Y2G8 782 aa20.73■□□□□ 0.91
CHKA-206ENST00000531341 SPTBN1Q01082 2364 aaKnown RBP20.73■□□□□ 0.91
CHKA-206ENST00000531341 TNRC6AQ8NDV7 1962 aaKnown RBP20.72■□□□□ 0.91
CHKA-206ENST00000531341 TOX3O15405 576 aaPredicted RBP20.72■□□□□ 0.91
CHKA-206ENST00000531341 MMP2P08253 660 aa20.72■□□□□ 0.91
CHKA-206ENST00000531341 CCNYL3P0C7X3 344 aa20.72■□□□□ 0.91
CHKA-206ENST00000531341 SKILP12757 684 aa20.72■□□□□ 0.91
CHKA-206ENST00000531341 ZNF165P49910 485 aa20.72■□□□□ 0.91
CHKA-206ENST00000531341 PPP1CAP62136 330 aa20.72■□□□□ 0.91
CHKA-206ENST00000531341 RPS18P62269 152 aaKnown RBP20.72■□□□□ 0.91
CHKA-206ENST00000531341 CHAF1BQ13112 559 aa20.72■□□□□ 0.91
CHKA-206ENST00000531341 ASIC2Q16515 512 aa20.72■□□□□ 0.91
CHKA-206ENST00000531341 ANKRD20A8PQ5CZ79 823 aa20.72■□□□□ 0.91
CHKA-206ENST00000531341 CACHD1Q5VU97 1274 aa20.72■□□□□ 0.91
CHKA-206ENST00000531341 CPZQ66K79 652 aa20.72■□□□□ 0.91
CHKA-206ENST00000531341 RBM43Q6ZSC3 357 aaKnown RBP20.72■□□□□ 0.91
CHKA-206ENST00000531341 GALNT11Q8NCW6 608 aa20.72■□□□□ 0.91
CHKA-206ENST00000531341 TEKT4Q8WW24 435 aa20.72■□□□□ 0.91
CHKA-206ENST00000531341 ACTL8Q9H568 366 aa20.72■□□□□ 0.91
CHKA-206ENST00000531341 MRPL47Q9HD33 250 aaKnown RBP20.72■□□□□ 0.91
CHKA-206ENST00000531341 PKD2L2Q9NZM6 624 aa20.72■□□□□ 0.91
CHKA-206ENST00000531341 DNPEPQ9ULA0 475 aa20.72■□□□□ 0.91
CHKA-206ENST00000531341 MYO6Q9UM54 1294 aa20.72■□□□□ 0.91
CHKA-206ENST00000531341 CENPEQ02224 2701 aa20.71■□□□□ 0.91
CHKA-206ENST00000531341 ZNF106Q9H2Y7 1883 aaKnown RBP20.71■□□□□ 0.91
CHKA-206ENST00000531341 OR52A4PA6NMU1 304 aa20.71■□□□□ 0.91
CHKA-206ENST00000531341 RPL10P27635 214 aaKnown RBP20.71■□□□□ 0.91
CHKA-206ENST00000531341 CASP14P31944 242 aa20.71■□□□□ 0.91
CHKA-206ENST00000531341 ATP13A4Q4VNC1 1196 aa20.71■□□□□ 0.91
CHKA-206ENST00000531341 TDRD12Q587J7 1177 aaKnown RBP20.71■□□□□ 0.91
CHKA-206ENST00000531341 ALS2CLQ60I27 953 aa20.71■□□□□ 0.91
CHKA-206ENST00000531341 PRSS42Q7Z5A4 293 aa20.71■□□□□ 0.91
CHKA-206ENST00000531341 LRRC49Q8IUZ0 686 aa20.71■□□□□ 0.91
CHKA-206ENST00000531341 GPR26Q8NDV2 337 aa20.71■□□□□ 0.91
CHKA-206ENST00000531341 FAM71BQ8TC56 605 aa20.71■□□□□ 0.91
CHKA-206ENST00000531341 SSC4DQ8WTU2 575 aa20.71■□□□□ 0.91
CHKA-206ENST00000531341 ISCUQ9H1K1 167 aa20.71■□□□□ 0.91
CHKA-206ENST00000531341 TRIM39Q9HCM9 518 aa20.71■□□□□ 0.91
CHKA-206ENST00000531341 AIPL1Q9NZN9 384 aa20.71■□□□□ 0.91
CHKA-206ENST00000531341 TRIM10Q9UDY6 481 aa20.71■□□□□ 0.91
CHKA-206ENST00000531341 MAP4K5Q9Y4K4 846 aa20.71■□□□□ 0.91
CHKA-206ENST00000531341 LRBAP50851 2863 aa20.71■□□□□ 0.91
CHKA-206ENST00000531341 A1L4Q6 167 aa20.7■□□□□ 0.9
CHKA-206ENST00000531341 ANKRD66B4E2M5 251 aa20.7■□□□□ 0.9
CHKA-206ENST00000531341 CHUKO15111 745 aa20.7■□□□□ 0.9
CHKA-206ENST00000531341 MTX2O75431 263 aa20.7■□□□□ 0.9
CHKA-206ENST00000531341 SLC25A14O95258 325 aaPredicted RBP20.7■□□□□ 0.9
CHKA-206ENST00000531341 ARSEP51690 589 aa20.7■□□□□ 0.9
CHKA-206ENST00000531341 RPL26P61254 145 aaKnown RBP20.7■□□□□ 0.9
CHKA-206ENST00000531341 GPR18Q14330 331 aa20.7■□□□□ 0.9
CHKA-206ENST00000531341 KRT81Q14533 505 aa20.7■□□□□ 0.9
CHKA-206ENST00000531341 KCNAB1Q14722 419 aa20.7■□□□□ 0.9
CHKA-206ENST00000531341 PAFAH1B3Q15102 231 aaKnown RBP20.7■□□□□ 0.9
CHKA-206ENST00000531341 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.7■□□□□ 0.9
CHKA-206ENST00000531341 KHDC1Q4VXA5 237 aaKnown RBP20.7■□□□□ 0.9
CHKA-206ENST00000531341 PWWP2BQ6NUJ5 590 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms