RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 TMEM198Q66K66 360 aa2.29□□□□□ -2.04
RNF4-219ENST00000513450 NADSYN1Q6IA69 706 aa2.29□□□□□ -2.04
RNF4-219ENST00000513450 ZNF704Q6ZNC4 412 aaPredicted RBP2.29□□□□□ -2.04
RNF4-219ENST00000513450 ENOSF1Q7L5Y1 443 aa2.29□□□□□ -2.04
RNF4-219ENST00000513450 PRPF39Q86UA1 669 aaKnown RBP2.29□□□□□ -2.04
RNF4-219ENST00000513450 PM20D2Q8IYS1 436 aa2.29□□□□□ -2.04
RNF4-219ENST00000513450 ZNF34Q8IZ26 560 aa2.29□□□□□ -2.04
RNF4-219ENST00000513450 GCSAMQ8N6F7 178 aa2.29□□□□□ -2.04
RNF4-219ENST00000513450 EMC1Q8N766 993 aa2.29□□□□□ -2.04
RNF4-219ENST00000513450 KCNH5Q8NCM2 988 aa2.29□□□□□ -2.04
RNF4-219ENST00000513450 SPATA22Q8NHS9 363 aa2.29□□□□□ -2.04
RNF4-219ENST00000513450 NUDCD2Q8WVJ2 157 aa2.29□□□□□ -2.04
RNF4-219ENST00000513450 PRPF31Q8WWY3 499 aaKnown RBP2.29□□□□□ -2.04
RNF4-219ENST00000513450 ABTB1Q969K4 478 aaPredicted RBP2.29□□□□□ -2.04
RNF4-219ENST00000513450 PIGTQ969N2 578 aa2.29□□□□□ -2.04
RNF4-219ENST00000513450 CDCA5Q96FF9 252 aa2.29□□□□□ -2.04
RNF4-219ENST00000513450 TMEM19Q96HH6 336 aa2.29□□□□□ -2.04
RNF4-219ENST00000513450 ADGRG7Q96K78 797 aa2.29□□□□□ -2.04
RNF4-219ENST00000513450 CEP295NLQ96MC4 621 aa2.29□□□□□ -2.04
RNF4-219ENST00000513450 CMKLR1Q99788 373 aa2.29□□□□□ -2.04
RNF4-219ENST00000513450 SEMA3CQ99985 751 aa2.29□□□□□ -2.04
RNF4-219ENST00000513450 KIFC3Q9BVG8 833 aa2.29□□□□□ -2.04
RNF4-219ENST00000513450 C6orf106Q9H6K1 298 aaPredicted RBP2.29□□□□□ -2.04
RNF4-219ENST00000513450 GAREM1Q9H706 876 aa2.29□□□□□ -2.04
RNF4-219ENST00000513450 PDE7BQ9NP56 450 aa2.29□□□□□ -2.04
RNF4-219ENST00000513450 TMEM30AQ9NV96 361 aa2.29□□□□□ -2.04
RNF4-219ENST00000513450 PAG1Q9NWQ8 432 aa2.29□□□□□ -2.04
RNF4-219ENST00000513450 ARHGEF38Q9NXL2 777 aa2.29□□□□□ -2.04
RNF4-219ENST00000513450 NKIRAS2Q9NYR9 191 aa2.29□□□□□ -2.04
RNF4-219ENST00000513450 WSB2Q9NYS7 404 aaPredicted RBP2.29□□□□□ -2.04
RNF4-219ENST00000513450 MRPL15Q9P015 296 aaKnown RBP2.29□□□□□ -2.04
RNF4-219ENST00000513450 DNAJB4Q9UDY4 337 aa2.29□□□□□ -2.04
RNF4-219ENST00000513450 RPS6KA6Q9UK32 745 aa2.29□□□□□ -2.04
RNF4-219ENST00000513450 VDAC3Q9Y277 283 aa2.29□□□□□ -2.04
RNF4-219ENST00000513450 KLHL20Q9Y2M5 609 aa2.29□□□□□ -2.04
RNF4-219ENST00000513450 PCDHAC2Q9Y5I4 1007 aa2.29□□□□□ -2.04
RNF4-219ENST00000513450 PDS5AQ29RF7 1337 aaKnown RBP2.28□□□□□ -2.04
RNF4-219ENST00000513450 IGKV2D-30A0A075B6S6 120 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 A0A1W2PP11 408 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 LNP1A1A4G5 178 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 GLOD5A6NK44 160 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 ACOT8O14734 319 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 NDUFS4O43181 175 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 BUD23O43709 281 aaKnown RBP2.28□□□□□ -2.04
RNF4-219ENST00000513450 ERAL1O75616 437 aaKnown RBP2.28□□□□□ -2.04
RNF4-219ENST00000513450 CAMTA2O94983 1202 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 PAPSS2O95340 614 aaPredicted RBP2.28□□□□□ -2.04
RNF4-219ENST00000513450 ZBTB11O95625 1053 aaPredicted RBP2.28□□□□□ -2.04
RNF4-219ENST00000513450 PPP1R3DO95685 299 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 TUBBP07437 444 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 MMP9P14780 707 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 KCNA5P22460 613 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 HRH2P25021 359 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 CORO1AP31146 461 aaKnown RBP2.28□□□□□ -2.04
RNF4-219ENST00000513450 PDLIM4P50479 330 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 HSD17B4P51659 736 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 ARSEP51690 589 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 STAT2P52630 851 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 CTSCP53634 463 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 BRWD1-AS2P59051 145 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 KRTAP10-9P60411 292 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 KRTAP10-11P60412 298 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 EEF1A1P68104 462 aaKnown RBP2.28□□□□□ -2.04
RNF4-219ENST00000513450 NUCB1Q02818 461 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 SPOCK1Q08629 439 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 GAGE2BQ13066 116 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 SNTA1Q13424 505 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 BAATQ14032 418 aaPredicted RBP2.28□□□□□ -2.04
RNF4-219ENST00000513450 BECN1Q14457 450 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 SF3B4Q15427 424 aaKnown RBP eCLIP2.28□□□□□ -2.041e-7■□□□□ 8.2
RNF4-219ENST00000513450 MEP1AQ16819 746 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 GAGE2EQ4V326 116 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 TMEM35AQ53FP2 167 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 EEF1A1P5Q5VTE0 462 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 GARNL3Q5VVW2 1013 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 ZDHHC20Q5W0Z9 365 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 FAM109BQ6ICB4 259 aaPredicted RBP2.28□□□□□ -2.04
RNF4-219ENST00000513450 GAGE2AQ6NT46 116 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 KRT74Q7RTS7 529 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 BHLHA9Q7RTU4 235 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 C16orf82Q7Z2V1 217 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 GALNT5Q7Z7M9 940 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 RBM23Q86U06 439 aaKnown RBP2.28□□□□□ -2.04
RNF4-219ENST00000513450 KBTBD6Q86V97 674 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 SFR1Q86XK3 245 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 KMT5CQ86Y97 462 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 MAP7D3Q8IWC1 876 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 C1orf87Q8N0U7 546 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 SCML4Q8N228 414 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 RASGEF1CQ8N431 466 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 SLC5A8Q8N695 610 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 IL17RCQ8NAC3 791 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 C9orf106Q8NAJ2 232 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 MCUQ8NE86 351 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 OR5R1Q8NH85 324 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 LILRB1Q8NHL6 650 aaPredicted RBP2.28□□□□□ -2.04
RNF4-219ENST00000513450 GSDMBQ8TAX9 411 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 LNX1Q8TBB1 728 aaPredicted RBP2.28□□□□□ -2.04
RNF4-219ENST00000513450 UTP15Q8TED0 518 aaKnown RBP2.28□□□□□ -2.04
RNF4-219ENST00000513450 PPP4R1Q8TF05 950 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms