RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 CCDC94Q9BW85 323 aaPredicted RBP3.16□□□□□ -1.9
RBM28-207ENST00000488249 USP44Q9H0E7 712 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 TKTL2Q9H0I9 626 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 RWDD1Q9H446 243 aaPredicted RBP3.16□□□□□ -1.9
RBM28-207ENST00000488249 C17orf75Q9HAS0 396 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 CCDC177Q9NQR7 707 aaPredicted RBP3.16□□□□□ -1.9
RBM28-207ENST00000488249 CNGB3Q9NQW8 809 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 PCDHB16Q9NRJ7 776 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 MCM9Q9NXL9 1143 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 TAS2R10Q9NYW0 307 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 SMARCAL1Q9NZC9 954 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 ZMAT5Q9UDW3 170 aaKnown RBP3.16□□□□□ -1.9
RBM28-207ENST00000488249 MALT1Q9UDY8 824 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 CFAP45Q9UL16 551 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 N6AMT1Q9Y5N5 214 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 UTYO14607 1347 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 NOTCH4Q99466 2003 aa3.15□□□□□ -1.9
RBM28-207ENST00000488249 SAA2-SAA4A0A096LPE2 208 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 LINC00854A0A1B0GVQ3 168 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 SOCS6O14544 535 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 CAPN9O14815 690 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 CASQ2O14958 399 aaPredicted RBP3.15□□□□□ -1.91
RBM28-207ENST00000488249 PLRG1O43660 514 aaKnown RBP3.15□□□□□ -1.91
RBM28-207ENST00000488249 SOCS5O75159 536 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 PTP4A3O75365 173 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 STAM2O75886 525 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 KDM4BO94953 1096 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 PMS2P2O95744 297 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 CYC1P08574 325 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 SNRNP70P08621 437 aaKnown RBP3.15□□□□□ -1.91
RBM28-207ENST00000488249 G6PDP11413 515 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 UBL4AP11441 157 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 PCP11498 1178 aaKnown RBP3.15□□□□□ -1.91
RBM28-207ENST00000488249 NEFHP12036 1026 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 EEF2P13639 858 aaKnown RBP3.15□□□□□ -1.91
RBM28-207ENST00000488249 PORP16435 677 aaPredicted RBP3.15□□□□□ -1.91
RBM28-207ENST00000488249 DDX5P17844 614 aaKnown RBP3.15□□□□□ -1.91
RBM28-207ENST00000488249 MAOAP21397 527 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 CCNCP24863 283 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 CDAP32320 146 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 HARS2P49590 506 aaKnown RBP3.15□□□□□ -1.91
RBM28-207ENST00000488249 METAP2P50579 478 aaKnown RBP eCLIP3.15□□□□□ -1.91
RBM28-207ENST00000488249 ALDH3A2P51648 485 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 CASP6P55212 293 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 NLRP5P59047 1200 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 ERVFC1-1P60608 527 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 SORDQ00796 357 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 KLHL30Q0D2K2 578 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 ZNF155Q12901 538 aaPredicted RBP3.15□□□□□ -1.91
RBM28-207ENST00000488249 NAE1Q13564 534 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 OASLQ15646 514 aaKnown RBP3.15□□□□□ -1.91
RBM28-207ENST00000488249 RABL6Q3YEC7 729 aaPredicted RBP3.15□□□□□ -1.91
RBM28-207ENST00000488249 HIST2H2BCQ6DN03 193 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 HIST2H2BDQ6DRA6 164 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 IL27RAQ6UWB1 636 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 QSOX2Q6ZRP7 698 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 TAOK1Q7L7X3 1001 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 PPP1R42Q7Z4L9 355 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 FOXRED2Q8IWF2 684 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 WDR63Q8IWG1 891 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 DSELQ8IZU8 1212 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 NUP93Q8N1F7 819 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 MOSPD2Q8NHP6 518 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 RND1Q92730 232 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 USP6NLQ92738 828 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 TEKT1Q969V4 418 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 SLC41A2Q96JW4 573 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 C1orf74Q96LT6 269 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 C3orf30Q96M34 536 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 ZNF396Q96N95 335 aaPredicted RBP3.15□□□□□ -1.91
RBM28-207ENST00000488249 FAM110AQ9BQ89 295 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 OR10A4Q9H209 315 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 KCNN2Q9H2S1 579 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 LIN28AQ9H9Z2 209 aaKnown RBP3.15□□□□□ -1.91
RBM28-207ENST00000488249 ZNF556Q9HAH1 456 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 GPR108Q9NPR9 543 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 ASAH2Q9NR71 780 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 SLC6A13Q9NSD5 602 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 CHCHD3Q9NX63 227 aaKnown RBP3.15□□□□□ -1.91
RBM28-207ENST00000488249 ADD3Q9UEY8 706 aaKnown RBP3.15□□□□□ -1.91
RBM28-207ENST00000488249 RASAL2Q9UJF2 1139 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 TINAGQ9UJW2 476 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 RPS6KA6Q9UK32 745 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 ERVK-11Q9UQG0 969 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 TRIM17Q9Y577 477 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 ANGPTL3Q9Y5C1 460 aa3.15□□□□□ -1.91
RBM28-207ENST00000488249 SCN5AQ14524 2016 aa3.14□□□□□ -1.91
RBM28-207ENST00000488249 TAF1P21675 1872 aa3.14□□□□□ -1.91
RBM28-207ENST00000488249 SNAP23O00161 211 aa3.14□□□□□ -1.91
RBM28-207ENST00000488249 MID1O15344 667 aa3.14□□□□□ -1.91
RBM28-207ENST00000488249 RFPL2O75678 378 aa3.14□□□□□ -1.91
RBM28-207ENST00000488249 SLC22A3O75751 556 aa3.14□□□□□ -1.91
RBM28-207ENST00000488249 RTN3O95197 1032 aaPredicted RBP3.14□□□□□ -1.91
RBM28-207ENST00000488249 LINC00271P0C7V0 271 aa3.14□□□□□ -1.91
RBM28-207ENST00000488249 SCG2P13521 617 aa3.14□□□□□ -1.91
RBM28-207ENST00000488249 TMOD1P28289 359 aa3.14□□□□□ -1.91
RBM28-207ENST00000488249 PBLDP30039 288 aaPredicted RBP3.14□□□□□ -1.91
RBM28-207ENST00000488249 MAPK4P31152 587 aa3.14□□□□□ -1.91
RBM28-207ENST00000488249 MTHFRP42898 656 aa3.14□□□□□ -1.91
RBM28-207ENST00000488249 MSH2P43246 934 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms