RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 PAIP2BQ9ULR5 123 aaKnown RBP11.65□□□□□ -0.54
PDZRN3-203ENST00000462146 SLC27A5Q9Y2P5 690 aa11.65□□□□□ -0.54
PDZRN3-203ENST00000462146 CFAP99D6REC4 459 aa11.65□□□□□ -0.54
PDZRN3-203ENST00000462146 CDC7O00311 574 aa11.65□□□□□ -0.54
PDZRN3-203ENST00000462146 CD3EAPO15446 510 aaKnown RBP11.65□□□□□ -0.54
PDZRN3-203ENST00000462146 XYLBO75191 536 aa11.65□□□□□ -0.54
PDZRN3-203ENST00000462146 EEDO75530 441 aaKnown RBP11.65□□□□□ -0.54
PDZRN3-203ENST00000462146 SEC14L2O76054 403 aa11.65□□□□□ -0.54
PDZRN3-203ENST00000462146 C7P10643 843 aa11.65□□□□□ -0.54
PDZRN3-203ENST00000462146 ARSFP54793 590 aa11.65□□□□□ -0.54
PDZRN3-203ENST00000462146 FOXM1Q08050 763 aa11.65□□□□□ -0.54
PDZRN3-203ENST00000462146 MFSD10Q14728 455 aa11.65□□□□□ -0.54
PDZRN3-203ENST00000462146 TSNQ15631 228 aaKnown RBP11.65□□□□□ -0.54
PDZRN3-203ENST00000462146 GLYATQ6IB77 296 aa11.65□□□□□ -0.54
PDZRN3-203ENST00000462146 PAQR3Q6TCH7 311 aa11.65□□□□□ -0.54
PDZRN3-203ENST00000462146 SCD5Q86SK9 330 aa11.65□□□□□ -0.54
PDZRN3-203ENST00000462146 TMEM86AQ8N2M4 240 aa11.65□□□□□ -0.54
PDZRN3-203ENST00000462146 BPIFB1Q8TDL5 484 aa11.65□□□□□ -0.54
PDZRN3-203ENST00000462146 CHPT1Q8WUD6 406 aa11.65□□□□□ -0.54
PDZRN3-203ENST00000462146 PPM1MQ96MI6 270 aa11.65□□□□□ -0.54
PDZRN3-203ENST00000462146 CDK15Q96Q40 435 aa11.65□□□□□ -0.54
PDZRN3-203ENST00000462146 ING2Q9H160 280 aa11.65□□□□□ -0.54
PDZRN3-203ENST00000462146 UBA6A0AVT1 1052 aaPredicted RBP11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 F8W810 466 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 NOBOXO60393 691 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 CAPN15O75808 1086 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 HTR1AP08908 422 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 PRR35P0CG20 571 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 CYP2C18P33260 490 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 IDUAP35475 653 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 POLR2JP52435 117 aaKnown RBP11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 PLA2G16P53816 162 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 ADAM17P78536 824 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 LCP2Q13094 533 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 LAPTM5Q13571 262 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 SETMARQ53H47 684 aaPredicted RBP11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 SDHAF4Q5VUM1 108 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 CIR1Q86X95 450 aaPredicted RBP11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 RIMKLAQ8IXN7 391 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 COLGALT2Q8IYK4 626 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 FBXO39Q8N4B4 442 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 TMEM199Q8N511 208 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 DTWD1Q8N5C7 304 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 PDZD8Q8NEN9 1154 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 DGCR6LQ9BY27 220 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 SMURF2Q9HAU4 748 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 EXD2Q9NVH0 621 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 RNF112Q9ULX5 631 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 NPEPPSL1A6NEC2 478 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 MAN1A2O60476 641 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 ECI2O75521 394 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 SLC22A3O75751 556 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 PAPSS2O95340 614 aaPredicted RBP11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 GLP2RO95838 553 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 THP07101 528 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 PIGAP37287 484 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 OPRL1P41146 370 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 PCBP1Q15365 356 aaKnown RBP eCLIP11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 BRMS1LQ5PSV4 323 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 MARC1Q5VT66 337 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 NCCRP1Q6ZVX7 275 aaPredicted RBP11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 STK32CQ86UX6 486 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 CLEC4FQ8N1N0 589 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 NPLOC4Q8TAT6 608 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 ARRDC2Q8TBH0 407 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 SP110Q9HB58 689 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 RIC8BQ9NVN3 520 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 ERGIC3Q9Y282 383 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 MED16Q9Y2X0 877 aa11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 TDRD15B5MCY1 1934 aaKnown RBP11.64□□□□□ -0.55
PDZRN3-203ENST00000462146 IQCA1LA6NCM1 817 aa11.63□□□□□ -0.55
PDZRN3-203ENST00000462146 SOBPA7XYQ1 873 aa11.63□□□□□ -0.55
PDZRN3-203ENST00000462146 ALPLP05186 524 aa11.63□□□□□ -0.55
PDZRN3-203ENST00000462146 AGXTP21549 392 aa11.63□□□□□ -0.55
PDZRN3-203ENST00000462146 SLC26A3P40879 764 aa11.63□□□□□ -0.55
PDZRN3-203ENST00000462146 TMBIM6P55061 237 aa11.63□□□□□ -0.55
PDZRN3-203ENST00000462146 CDC42EP1Q00587 391 aa11.63□□□□□ -0.55
PDZRN3-203ENST00000462146 BEX3Q00994 111 aa11.63□□□□□ -0.55
PDZRN3-203ENST00000462146 YWHAHQ04917 246 aaPredicted RBP11.63□□□□□ -0.55
PDZRN3-203ENST00000462146 MEP1AQ16819 746 aa11.63□□□□□ -0.55
PDZRN3-203ENST00000462146 PDCD4Q53EL6 469 aaKnown RBP11.63□□□□□ -0.55
PDZRN3-203ENST00000462146 COQ5Q5HYK3 327 aa11.63□□□□□ -0.55
PDZRN3-203ENST00000462146 BROXQ5VW32 411 aa11.63□□□□□ -0.55
PDZRN3-203ENST00000462146 GTF2IRD2BQ6EKJ0 949 aa11.63□□□□□ -0.55
PDZRN3-203ENST00000462146 GALNT7Q86SF2 657 aa11.63□□□□□ -0.55
PDZRN3-203ENST00000462146 GTF2IRD2Q86UP8 949 aa11.63□□□□□ -0.55
PDZRN3-203ENST00000462146 TERB1Q8NA31 727 aa11.63□□□□□ -0.55
PDZRN3-203ENST00000462146 OSCP1Q8WVF1 389 aa11.63□□□□□ -0.55
PDZRN3-203ENST00000462146 SMIM14Q96QK8 99 aa11.63□□□□□ -0.55
PDZRN3-203ENST00000462146 TUBA1CQ9BQE3 449 aa11.63□□□□□ -0.55
PDZRN3-203ENST00000462146 SMOC2Q9H3U7 446 aa11.63□□□□□ -0.55
PDZRN3-203ENST00000462146 TOR3AQ9H497 397 aa11.63□□□□□ -0.55
PDZRN3-203ENST00000462146 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.63□□□□□ -0.55
PDZRN3-203ENST00000462146 TMEM9Q9P0T7 183 aa11.63□□□□□ -0.55
PDZRN3-203ENST00000462146 PCDHGA8Q9Y5G5 932 aa11.63□□□□□ -0.55
PDZRN3-203ENST00000462146 ACTL7AQ9Y615 435 aa11.63□□□□□ -0.55
PDZRN3-203ENST00000462146 A0A1W2PQH9 124 aa11.63□□□□□ -0.55
PDZRN3-203ENST00000462146 TRIM43BA6NCK2 446 aa11.63□□□□□ -0.55
PDZRN3-203ENST00000462146 MUSKO15146 869 aa11.63□□□□□ -0.55
PDZRN3-203ENST00000462146 CLPXO76031 633 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms