RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 TRIM39Q9HCM9 518 aa30.28■■■□□ 2.44
CSNK1E-206ENST00000413574 MARCH4Q9P2E8 410 aaPredicted RBP30.28■■■□□ 2.44
CSNK1E-206ENST00000413574 ZC3H7BQ9UGR2 993 aaKnown RBP30.28■■■□□ 2.44
CSNK1E-206ENST00000413574 PRSS38A1L453 326 aa30.27■■■□□ 2.44
CSNK1E-206ENST00000413574 SDC3O75056 442 aa30.27■■■□□ 2.44
CSNK1E-206ENST00000413574 PPARDQ03181 441 aa30.27■■■□□ 2.44
CSNK1E-206ENST00000413574 CRYMQ14894 314 aa30.27■■■□□ 2.44
CSNK1E-206ENST00000413574 AASDHQ4L235 1098 aaPredicted RBP30.27■■■□□ 2.44
CSNK1E-206ENST00000413574 KIAA0930Q6ICG6 404 aaPredicted RBP30.27■■■□□ 2.44
CSNK1E-206ENST00000413574 LDB1Q86U70 411 aaPredicted RBP30.27■■■□□ 2.44
CSNK1E-206ENST00000413574 DDHD1Q8NEL9 900 aa30.27■■■□□ 2.44
CSNK1E-206ENST00000413574 RRAGDQ9NQL2 400 aaPredicted RBP30.27■■■□□ 2.44
CSNK1E-206ENST00000413574 SUFUQ9UMX1 484 aa30.27■■■□□ 2.44
CSNK1E-206ENST00000413574 CABIN1Q9Y6J0 2220 aa30.27■■■□□ 2.44
CSNK1E-206ENST00000413574 DMXL1Q9Y485 3027 aa30.27■■■□□ 2.44
CSNK1E-206ENST00000413574 TRBV5-4A0A0C4DH59 114 aa30.26■■■□□ 2.44
CSNK1E-206ENST00000413574 CDX4O14627 284 aaPredicted RBP30.26■■■□□ 2.44
CSNK1E-206ENST00000413574 CSF2P04141 144 aa30.26■■■□□ 2.44
CSNK1E-206ENST00000413574 JUNDP17535 347 aa30.26■■■□□ 2.44
CSNK1E-206ENST00000413574 BNIP3Q12983 259 aa30.26■■■□□ 2.44
CSNK1E-206ENST00000413574 CBLBQ13191 982 aa30.26■■■□□ 2.44
CSNK1E-206ENST00000413574 GPR33Q49SQ1 333 aa30.26■■■□□ 2.44
CSNK1E-206ENST00000413574 UNC5AQ6ZN44 842 aa30.26■■■□□ 2.44
CSNK1E-206ENST00000413574 IFT20Q8IY31 132 aa30.26■■■□□ 2.44
CSNK1E-206ENST00000413574 PHACTR4Q8IZ21 702 aa30.26■■■□□ 2.44
CSNK1E-206ENST00000413574 PRKAB1Q9Y478 270 aa30.26■■■□□ 2.44
CSNK1E-206ENST00000413574 TNFRSF10CO14798 259 aa30.25■■■□□ 2.43
CSNK1E-206ENST00000413574 CER1O95813 267 aa30.25■■■□□ 2.43
CSNK1E-206ENST00000413574 NME1P15531 152 aaKnown RBP30.25■■■□□ 2.43
CSNK1E-206ENST00000413574 ZNF8P17098 575 aaPredicted RBP30.25■■■□□ 2.43
CSNK1E-206ENST00000413574 PAMP19021 973 aa30.25■■■□□ 2.43
CSNK1E-206ENST00000413574 HK3P52790 923 aa30.25■■■□□ 2.43
CSNK1E-206ENST00000413574 TMEM115Q12893 351 aaPredicted RBP30.25■■■□□ 2.43
CSNK1E-206ENST00000413574 FASTKD1Q53R41 847 aaKnown RBP30.25■■■□□ 2.43
CSNK1E-206ENST00000413574 LDLRAP1Q5SW96 308 aa30.25■■■□□ 2.43
CSNK1E-206ENST00000413574 ULK4Q96C45 1275 aa30.25■■■□□ 2.43
CSNK1E-206ENST00000413574 NAT9Q9BTE0 207 aa30.25■■■□□ 2.43
CSNK1E-206ENST00000413574 CARS2Q9HA77 564 aaKnown RBP30.25■■■□□ 2.43
CSNK1E-206ENST00000413574 CATSPERZQ9NTU4 200 aa30.25■■■□□ 2.43
CSNK1E-206ENST00000413574 NOL12Q9UGY1 213 aaKnown RBP eCLIP30.25■■■□□ 2.43
CSNK1E-206ENST00000413574 FAM169AQ9Y6X4 670 aa30.25■■■□□ 2.43
CSNK1E-206ENST00000413574 V9GYY5 206 aaPredicted RBP30.25■■■□□ 2.43
CSNK1E-206ENST00000413574 A0A1B0GTQ1 180 aa30.25■■■□□ 2.43
CSNK1E-206ENST00000413574 CD3EAPO15446 510 aaKnown RBP30.25■■■□□ 2.43
CSNK1E-206ENST00000413574 ACRV1P26436 265 aa30.25■■■□□ 2.43
CSNK1E-206ENST00000413574 AKT1P31749 480 aa30.25■■■□□ 2.43
CSNK1E-206ENST00000413574 GNPDA1P46926 289 aa30.25■■■□□ 2.43
CSNK1E-206ENST00000413574 B4GALNT1Q00973 533 aa30.25■■■□□ 2.43
CSNK1E-206ENST00000413574 DBN1Q16643 649 aa30.25■■■□□ 2.43
CSNK1E-206ENST00000413574 SERBP1Q8NC51 408 aaKnown RBP eCLIP30.25■■■□□ 2.43
CSNK1E-206ENST00000413574 SGSM3Q96HU1 749 aa30.25■■■□□ 2.43
CSNK1E-206ENST00000413574 BOCQ9BWV1 1114 aa30.25■■■□□ 2.43
CSNK1E-206ENST00000413574 VPS18Q9P253 973 aa30.25■■■□□ 2.43
CSNK1E-206ENST00000413574 NFU1Q9UMS0 254 aa30.25■■■□□ 2.43
CSNK1E-206ENST00000413574 GVINP1Q7Z2Y8 2422 aa30.24■■■□□ 2.43
CSNK1E-206ENST00000413574 DNAJC6O75061 913 aa30.24■■■□□ 2.43
CSNK1E-206ENST00000413574 ARRB1P49407 418 aaPredicted RBP30.24■■■□□ 2.43
CSNK1E-206ENST00000413574 SPANXN3Q5MJ09 141 aa30.24■■■□□ 2.43
CSNK1E-206ENST00000413574 C20orf96Q9NUD7 363 aaPredicted RBP30.24■■■□□ 2.43
CSNK1E-206ENST00000413574 APOBEC3BQ9UH17 382 aaKnown RBP30.24■■■□□ 2.43
CSNK1E-206ENST00000413574 EIF3HO15372 352 aaKnown RBP eCLIP30.23■■■□□ 2.432e-8■□□□□ 9.9
CSNK1E-206ENST00000413574 CDK14O94921 469 aa30.23■■■□□ 2.43
CSNK1E-206ENST00000413574 RASGRP1O95267 797 aa30.23■■■□□ 2.43
CSNK1E-206ENST00000413574 TNFP01375 233 aa30.23■■■□□ 2.43
CSNK1E-206ENST00000413574 RXRGP48443 463 aa30.23■■■□□ 2.43
CSNK1E-206ENST00000413574 CUL1Q13616 776 aa30.23■■■□□ 2.43
CSNK1E-206ENST00000413574 LONRF1Q17RB8 773 aa30.23■■■□□ 2.43
CSNK1E-206ENST00000413574 CAPN12Q6ZSI9 719 aa30.23■■■□□ 2.43
CSNK1E-206ENST00000413574 DET1Q7L5Y6 550 aa30.23■■■□□ 2.43
CSNK1E-206ENST00000413574 KIAA2013Q8IYS2 634 aa30.23■■■□□ 2.43
CSNK1E-206ENST00000413574 OXR1Q8N573 874 aa30.23■■■□□ 2.43
CSNK1E-206ENST00000413574 OTUD6BQ8N6M0 293 aa30.23■■■□□ 2.43
CSNK1E-206ENST00000413574 RASGEF1AQ8N9B8 481 aa30.23■■■□□ 2.43
CSNK1E-206ENST00000413574 PYROXD1Q8WU10 500 aa30.23■■■□□ 2.43
CSNK1E-206ENST00000413574 SCARF2Q96GP6 870 aaPredicted RBP30.23■■■□□ 2.43
CSNK1E-206ENST00000413574 ZDHHC3Q9NYG2 299 aa30.23■■■□□ 2.43
CSNK1E-206ENST00000413574 ZNHIT2Q9UHR6 403 aa30.23■■■□□ 2.43
CSNK1E-206ENST00000413574 DGKBQ9Y6T7 804 aa30.23■■■□□ 2.43
CSNK1E-206ENST00000413574 NUAK1O60285 661 aa30.22■■■□□ 2.43
CSNK1E-206ENST00000413574 TTC4O95801 387 aa30.22■■■□□ 2.43
CSNK1E-206ENST00000413574 IVLP07476 585 aa30.22■■■□□ 2.43
CSNK1E-206ENST00000413574 MSH3P20585 1137 aa30.22■■■□□ 2.43
CSNK1E-206ENST00000413574 C1orf61Q13536 156 aa30.22■■■□□ 2.43
CSNK1E-206ENST00000413574 GATAD2AQ86YP4 633 aa30.22■■■□□ 2.43
CSNK1E-206ENST00000413574 CCNJLQ8IV13 435 aa30.22■■■□□ 2.43
CSNK1E-206ENST00000413574 C9orf72Q96LT7 481 aa30.22■■■□□ 2.43
CSNK1E-206ENST00000413574 TTC25Q96NG3 672 aa30.22■■■□□ 2.43
CSNK1E-206ENST00000413574 COPS8Q99627 209 aa30.22■■■□□ 2.43
CSNK1E-206ENST00000413574 LRRC61Q9BV99 259 aa30.22■■■□□ 2.43
CSNK1E-206ENST00000413574 FOXP3Q9BZS1 431 aa30.22■■■□□ 2.43
CSNK1E-206ENST00000413574 SLC13A1Q9BZW2 595 aa30.22■■■□□ 2.43
CSNK1E-206ENST00000413574 TMEM168Q9H0V1 697 aa30.22■■■□□ 2.43
CSNK1E-206ENST00000413574 ANKZF1Q9H8Y5 726 aa30.22■■■□□ 2.43
CSNK1E-206ENST00000413574 TMEM9BQ9NQ34 198 aa30.22■■■□□ 2.43
CSNK1E-206ENST00000413574 TM7SF3Q9NS93 570 aa30.22■■■□□ 2.43
CSNK1E-206ENST00000413574 UCKL1Q9NWZ5 548 aa30.22■■■□□ 2.43
CSNK1E-206ENST00000413574 MTRF1LQ9UGC7 380 aaKnown RBP30.22■■■□□ 2.43
CSNK1E-206ENST00000413574 CFAP54Q96N23 3096 aa30.22■■■□□ 2.43
CSNK1E-206ENST00000413574 VEGFDO43915 354 aa30.22■■■□□ 2.43
CSNK1E-206ENST00000413574 CELA2BP08218 269 aaPredicted RBP30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms