RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 ASLP04424 464 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 UGT2B4P06133 528 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 DBTP11182 482 aaKnown RBP16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 GRIA1P42261 906 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 PTSQ03393 145 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 HERC3Q15034 1050 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 POM121L1PQ3SYA9 428 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 MAB21L3Q8N8X9 362 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 OR52L1Q8NGH7 329 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 FEM1CQ96JP0 617 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 ETAA1Q9NY74 926 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 CNTN3Q9P232 1028 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 IFT80Q9P2H3 777 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 ATP6V1HQ9UI12 483 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 OR10H3O60404 316 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 UGT2B11O75310 529 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 SCELO95171 688 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 LAG3P18627 525 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 MTHFRP42898 656 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 NRLP54845 237 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 HLA-DQA1Q5Y7H0 255 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 RALGPS2Q86X27 583 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 PHC3Q8NDX5 983 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 CLHC1Q8NHS4 586 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 SEC14L1Q92503 715 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 BORCS5Q969J3 196 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 U3KQV3 271 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 UBXN8O00124 270 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 THRBP10828 461 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 CDH5P33151 784 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 HSPA7P48741 367 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 C6orf52Q5T4I8 152 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 C16orf62Q7Z3J2 963 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 RAVER1Q8IY67 606 aaKnown RBP16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 COL26A1Q96A83 441 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 AARSD1Q9BTE6 412 aaKnown RBP16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 TIMMDC1Q9NPL8 285 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 GTF2IRD1Q9UHL9 959 aa16.97■□□□□ 0.31
TRAPPC11-201ENST00000334690 CDK14O94921 469 aa16.96■□□□□ 0.31
TRAPPC11-201ENST00000334690 NR2F6P10588 404 aa16.96■□□□□ 0.31
TRAPPC11-201ENST00000334690 TRAP1Q12931 704 aaKnown RBP16.96■□□□□ 0.31
TRAPPC11-201ENST00000334690 OR8D1Q8WZ84 308 aa16.96■□□□□ 0.31
TRAPPC11-201ENST00000334690 SLITRK2Q9H156 845 aa16.96■□□□□ 0.31
TRAPPC11-201ENST00000334690 PRDM8Q9NQV8 689 aa16.96■□□□□ 0.31
TRAPPC11-201ENST00000334690 CXorf49A8MYA2 514 aaPredicted RBP16.96■□□□□ 0.31
TRAPPC11-201ENST00000334690 PIP5K1BO14986 540 aa16.96■□□□□ 0.31
TRAPPC11-201ENST00000334690 CAPN1P07384 714 aa16.96■□□□□ 0.31
TRAPPC11-201ENST00000334690 PRPS2P11908 318 aa16.96■□□□□ 0.31
TRAPPC11-201ENST00000334690 ITPKAP23677 461 aa16.96■□□□□ 0.31
TRAPPC11-201ENST00000334690 COPZ1P61923 177 aa16.96■□□□□ 0.31
TRAPPC11-201ENST00000334690 CHSY3Q70JA7 882 aa16.96■□□□□ 0.31
TRAPPC11-201ENST00000334690 C17orf64Q86WR6 236 aa16.96■□□□□ 0.31
TRAPPC11-201ENST00000334690 TRIM63Q969Q1 353 aa16.96■□□□□ 0.31
TRAPPC11-201ENST00000334690 HIPK3Q9H422 1215 aa16.96■□□□□ 0.31
TRAPPC11-201ENST00000334690 ITGB1BP2Q9UKP3 347 aa16.96■□□□□ 0.31
TRAPPC11-201ENST00000334690 URADA6NGE7 173 aa16.96■□□□□ 0.31
TRAPPC11-201ENST00000334690 H3BM21 787 aa16.96■□□□□ 0.31
TRAPPC11-201ENST00000334690 TRMUO75648 421 aaKnown RBP16.96■□□□□ 0.31
TRAPPC11-201ENST00000334690 GLUD1P00367 558 aa16.96■□□□□ 0.31
TRAPPC11-201ENST00000334690 GTF2E2P29084 291 aaKnown RBP16.96■□□□□ 0.31
TRAPPC11-201ENST00000334690 SULT1C3Q6IMI6 304 aa16.96■□□□□ 0.31
TRAPPC11-201ENST00000334690 CACTIN-AS1Q8N1I8 211 aa16.96■□□□□ 0.31
TRAPPC11-201ENST00000334690 BEND7Q8N7W2 519 aaPredicted RBP16.96■□□□□ 0.31
TRAPPC11-201ENST00000334690 GLB1L3Q8NCI6 653 aaPredicted RBP16.96■□□□□ 0.31
TRAPPC11-201ENST00000334690 C2orf15Q8WU43 125 aaKnown RBP16.96■□□□□ 0.31
TRAPPC11-201ENST00000334690 TFB2MQ9H5Q4 396 aaKnown RBP16.96■□□□□ 0.31
TRAPPC11-201ENST00000334690 GDAP2Q9NXN4 497 aa16.96■□□□□ 0.31
TRAPPC11-201ENST00000334690 TBX10O75333 385 aa16.96■□□□□ 0.3
TRAPPC11-201ENST00000334690 ERAL1O75616 437 aaKnown RBP16.96■□□□□ 0.3
TRAPPC11-201ENST00000334690 PRKCHP24723 683 aa16.96■□□□□ 0.3
TRAPPC11-201ENST00000334690 HNF4AP41235 474 aa16.96■□□□□ 0.3
TRAPPC11-201ENST00000334690 CHRNA4P43681 627 aa16.96■□□□□ 0.3
TRAPPC11-201ENST00000334690 ADGRE1Q14246 886 aa16.96■□□□□ 0.3
TRAPPC11-201ENST00000334690 ZNF460Q14592 562 aa16.96■□□□□ 0.3
TRAPPC11-201ENST00000334690 ZNF846Q147U1 533 aa16.96■□□□□ 0.3
TRAPPC11-201ENST00000334690 GALNT18Q6P9A2 607 aa16.96■□□□□ 0.3
TRAPPC11-201ENST00000334690 C6orf89Q6UWU4 347 aa16.96■□□□□ 0.3
TRAPPC11-201ENST00000334690 DCBLD1Q8N8Z6 715 aa16.96■□□□□ 0.3
TRAPPC11-201ENST00000334690 C7orf43Q8WVR3 580 aa16.96■□□□□ 0.3
TRAPPC11-201ENST00000334690 SGK2Q9HBY8 427 aa16.96■□□□□ 0.3
TRAPPC11-201ENST00000334690 ATG13O75143 517 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 OR4F21O95013 312 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 CHRNGP07510 517 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 IL12RB1P42701 662 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 RFTN1Q14699 578 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 CPNE9Q8IYJ1 553 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 ARL10Q8N8L6 244 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 NMUR1Q9HB89 426 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 ZNF358Q9NW07 568 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 RAB23Q9ULC3 237 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 TLR6Q9Y2C9 796 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 LYVE1Q9Y5Y7 322 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 RBM47A0AV96 593 aaKnown RBP16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 NADKO95544 446 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 FGF19O95750 216 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 BMP7P18075 431 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 JAK1P23458 1154 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 CTNNB1P35222 781 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 PEX6Q13608 980 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms