RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 GMIPQ9P107 970 aa16.31■□□□□ 0.2
PTCH1-201ENST00000331920 RAB4AP20338 218 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 ACVR2AP27037 513 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 CXCR3P49682 368 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 SEC13P55735 322 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 PLGLB1Q02325 96 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 SLC13A2Q13183 592 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 CFAP52Q8N1V2 620 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 ZNF606Q8WXB4 792 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 GSKIPQ9P0R6 139 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 SIRPGQ9P1W8 387 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 AP4B1Q9Y6B7 739 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 MC4RP32245 332 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 MAP3K8P41279 467 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 ZNF135P52742 658 aaPredicted RBP16.3■□□□□ 0.2
PTCH1-201ENST00000331920 FOXO4P98177 505 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 SLC6A3Q01959 620 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 CREB5Q02930 508 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 GIT2Q14161 759 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 SIM2Q14190 667 aaPredicted RBP16.3■□□□□ 0.2
PTCH1-201ENST00000331920 ATXN7L2Q5T6C5 722 aaPredicted RBP16.3■□□□□ 0.2
PTCH1-201ENST00000331920 AGO4Q9HCK5 861 aaKnown RBP16.3■□□□□ 0.2
PTCH1-201ENST00000331920 TUBA8Q9NY65 449 aaPredicted RBP16.3■□□□□ 0.2
PTCH1-201ENST00000331920 CLDN4O14493 209 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 PDPK1O15530 556 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 MT-ND1P03886 318 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 INSRRP14616 1297 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 IDO1P14902 403 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 CCR10P46092 362 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 ANTXR2P58335 489 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 DCST1Q5T197 706 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 C1orf186Q6ZWK4 172 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 GET4Q7L5D6 327 aaPredicted RBP16.3■□□□□ 0.2
PTCH1-201ENST00000331920 SLC9A3R1O14745 358 aaPredicted RBP16.3■□□□□ 0.2
PTCH1-201ENST00000331920 CALCAP01258 141 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 ARPC4P59998 168 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 UAP1L1Q3KQV9 507 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 TBC1D15Q8TC07 691 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 HDAC2Q92769 488 aaKnown RBP16.3■□□□□ 0.2
PTCH1-201ENST00000331920 LDAHQ9H6V9 325 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 AASSQ9UDR5 926 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 KCNJ13O60928 360 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 PSMD8P48556 350 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 ZNF844Q08AG5 666 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 SUN3Q8TAQ9 357 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 MRPL57Q9BQC6 102 aaKnown RBP16.3■□□□□ 0.2
PTCH1-201ENST00000331920 PADI2Q9Y2J8 665 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 WASP42768 502 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 SLC7A6OSQ96CW6 309 aaPredicted RBP16.3■□□□□ 0.2
PTCH1-201ENST00000331920 PPM1MQ96MI6 270 aa16.3■□□□□ 0.2
PTCH1-201ENST00000331920 GBA2Q9HCG7 927 aaPredicted RBP16.3■□□□□ 0.2
PTCH1-201ENST00000331920 ENTPD5O75356 428 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 LIPMQ5VYY2 423 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 IQCHQ86VS3 1027 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 CEP97Q8IW35 865 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 TCF12Q99081 682 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 ULBP1Q9BZM6 244 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 NYAP2Q9P242 653 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 COMMD3Q9UBI1 195 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 ABCD2Q9UBJ2 740 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 COMMD3-BMI1R4GMX3 469 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 ATP10BO94823 1461 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 FADS2P1A8MWK0 482 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 EIF1AYO14602 144 aaKnown RBP16.29■□□□□ 0.2
PTCH1-201ENST00000331920 KCNQ2O43526 872 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 PITPNAQ00169 270 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 COLEC12Q5KU26 742 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 FAM46CQ5VWP2 391 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 C17orf64Q86WR6 236 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 NETO2Q8NC67 525 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 CERS2Q96G23 380 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 RNPEPL1Q9HAU8 725 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 USP6P35125 1406 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 H3BQF6 201 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 TBX1O43435 398 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 ALADP13716 330 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 CD247P20963 164 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 NR0B1P51843 470 aaKnown RBP16.29■□□□□ 0.2
PTCH1-201ENST00000331920 USP4Q13107 963 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 BLMHQ13867 455 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 DSG2Q14126 1118 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 PARP6Q2NL67 630 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 ZNF565Q8N9K5 539 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 PNLDC1Q8NA58 520 aaKnown RBP16.29■□□□□ 0.2
PTCH1-201ENST00000331920 TNFRSF11BO00300 401 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 PDE2AO00408 941 aaPredicted RBP16.29■□□□□ 0.2
PTCH1-201ENST00000331920 CPNE3O75131 537 aaKnown RBP16.29■□□□□ 0.2
PTCH1-201ENST00000331920 CD44P16070 742 aaKnown RBP16.29■□□□□ 0.2
PTCH1-201ENST00000331920 LTKP29376 864 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 DCDC1P59894 354 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 SCGB2A2Q13296 93 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 GRK1Q15835 563 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 DUPD1Q68J44 220 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 GK5Q6ZS86 529 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 TLX3O43711 291 aaPredicted RBP16.29■□□□□ 0.2
PTCH1-201ENST00000331920 LPCAT4Q643R3 524 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 SLC25A36Q96CQ1 311 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 C12orf66Q96MD2 445 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 EBPLQ9BY08 206 aa16.29■□□□□ 0.2
PTCH1-201ENST00000331920 HIPK3Q9H422 1215 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms