RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 EPHA4P54764 986 aa17.53■□□□□ 0.4
HDDC3-201ENST00000330334 WNT3AP56704 352 aa17.53■□□□□ 0.4
HDDC3-201ENST00000330334 HHEXQ03014 270 aa17.53■□□□□ 0.4
HDDC3-201ENST00000330334 FAM182AQ5T1J6 154 aa17.53■□□□□ 0.4
HDDC3-201ENST00000330334 BBS12Q6ZW61 710 aa17.53■□□□□ 0.4
HDDC3-201ENST00000330334 ZC3H18Q86VM9 953 aaKnown RBP17.53■□□□□ 0.4
HDDC3-201ENST00000330334 PHYKPLQ8IUZ5 450 aa17.53■□□□□ 0.4
HDDC3-201ENST00000330334 HTR3CQ8WXA8 447 aa17.53■□□□□ 0.4
HDDC3-201ENST00000330334 QKIQ96PU8 341 aaKnown RBP eCLIP17.53■□□□□ 0.4
HDDC3-201ENST00000330334 OR2AG1Q9H205 316 aa17.53■□□□□ 0.4
HDDC3-201ENST00000330334 GOLPH3Q9H4A6 298 aa17.53■□□□□ 0.4
HDDC3-201ENST00000330334 UCK1Q9HA47 277 aa17.53■□□□□ 0.4
HDDC3-201ENST00000330334 HACD3Q9P035 362 aa17.53■□□□□ 0.4
HDDC3-201ENST00000330334 KCNK6Q9Y257 313 aa17.53■□□□□ 0.4
HDDC3-201ENST00000330334 SPO11Q9Y5K1 396 aa17.53■□□□□ 0.4
HDDC3-201ENST00000330334 TRBV23OR9-2A0A075B6M9 112 aa17.52■□□□□ 0.4
HDDC3-201ENST00000330334 PRR19A6NJB7 356 aa17.52■□□□□ 0.4
HDDC3-201ENST00000330334 BTNL10A8MVZ5 291 aa17.52■□□□□ 0.4
HDDC3-201ENST00000330334 B4E171 279 aa17.52■□□□□ 0.4
HDDC3-201ENST00000330334 APOC4-APOC2K7ER74 178 aa17.52■□□□□ 0.4
HDDC3-201ENST00000330334 KMOO15229 486 aa17.52■□□□□ 0.4
HDDC3-201ENST00000330334 DUX1O43812 170 aa17.52■□□□□ 0.4
HDDC3-201ENST00000330334 C1QL1O75973 258 aa17.52■□□□□ 0.4
HDDC3-201ENST00000330334 NDUFA10O95299 355 aa17.52■□□□□ 0.4
HDDC3-201ENST00000330334 APOC2P02655 101 aa17.52■□□□□ 0.4
HDDC3-201ENST00000330334 FGF3P11487 239 aaPredicted RBP17.52■□□□□ 0.4
HDDC3-201ENST00000330334 CCL4P13236 92 aa17.52■□□□□ 0.4
HDDC3-201ENST00000330334 NFKB1P19838 968 aa17.52■□□□□ 0.4
HDDC3-201ENST00000330334 CSTF2P33240 577 aaKnown RBP eCLIP17.52■□□□□ 0.4
HDDC3-201ENST00000330334 TSPAN7P41732 249 aa17.52■□□□□ 0.4
HDDC3-201ENST00000330334 TNNT3P45378 269 aaPredicted RBP17.52■□□□□ 0.4
HDDC3-201ENST00000330334 MAPK10P53779 464 aa17.52■□□□□ 0.4
HDDC3-201ENST00000330334 MPP3Q13368 585 aa17.52■□□□□ 0.4
HDDC3-201ENST00000330334 ALS2CLQ60I27 953 aa17.52■□□□□ 0.4
HDDC3-201ENST00000330334 PID1Q7Z2X4 250 aa17.52■□□□□ 0.4
HDDC3-201ENST00000330334 DAAM2Q86T65 1068 aa17.52■□□□□ 0.4
HDDC3-201ENST00000330334 ZNF567Q8N184 647 aa17.52■□□□□ 0.4
HDDC3-201ENST00000330334 RCBTB1Q8NDN9 531 aa17.52■□□□□ 0.4
HDDC3-201ENST00000330334 CCDC112Q8NEF3 446 aa17.52■□□□□ 0.4
HDDC3-201ENST00000330334 AHCYL2Q96HN2 611 aaKnown RBP17.52■□□□□ 0.4
HDDC3-201ENST00000330334 MRGPRX2Q96LB1 330 aa17.52■□□□□ 0.4
HDDC3-201ENST00000330334 TIMM29Q9BSF4 260 aa17.52■□□□□ 0.4
HDDC3-201ENST00000330334 DDA1Q9BW61 102 aa17.52■□□□□ 0.4
HDDC3-201ENST00000330334 UBP1Q9NZI7 540 aa17.52■□□□□ 0.4
HDDC3-201ENST00000330334 FOXJ2Q9P0K8 574 aa17.52■□□□□ 0.4
HDDC3-201ENST00000330334 KLHL8Q9P2G9 620 aaPredicted RBP17.52■□□□□ 0.4
HDDC3-201ENST00000330334 PCDHB11Q9Y5F2 797 aa17.52■□□□□ 0.4
HDDC3-201ENST00000330334 PCDHA3Q9Y5H8 950 aa17.52■□□□□ 0.4
HDDC3-201ENST00000330334 HELZ2Q9BYK8 2649 aaKnown RBP17.52■□□□□ 0.4
HDDC3-201ENST00000330334 GCN1Q92616 2671 aaKnown RBP17.51■□□□□ 0.39
HDDC3-201ENST00000330334 AURKAO14965 403 aa17.51■□□□□ 0.39
HDDC3-201ENST00000330334 PPFIA2O75334 1257 aa17.51■□□□□ 0.39
HDDC3-201ENST00000330334 XRCC1P18887 633 aaPredicted RBP17.51■□□□□ 0.39
HDDC3-201ENST00000330334 HLA-DPA1P20036 260 aa17.51■□□□□ 0.39
HDDC3-201ENST00000330334 CTNNA1P35221 906 aaKnown RBP17.51■□□□□ 0.39
HDDC3-201ENST00000330334 PTPN7P35236 360 aa17.51■□□□□ 0.39
HDDC3-201ENST00000330334 MARCKSL1P49006 195 aa17.51■□□□□ 0.39
HDDC3-201ENST00000330334 ZNF75DP51815 510 aa17.51■□□□□ 0.39
HDDC3-201ENST00000330334 LLGL1Q15334 1064 aa17.51■□□□□ 0.39
HDDC3-201ENST00000330334 TGIF1Q15583 401 aa17.51■□□□□ 0.39
HDDC3-201ENST00000330334 SLC1A5Q15758 541 aa17.51■□□□□ 0.39
HDDC3-201ENST00000330334 TAF1BQ53T94 588 aaPredicted RBP17.51■□□□□ 0.39
HDDC3-201ENST00000330334 SIRPB2Q5JXA9 342 aa17.51■□□□□ 0.39
HDDC3-201ENST00000330334 XKR5Q6UX68 686 aa17.51■□□□□ 0.39
HDDC3-201ENST00000330334 WASH2PQ6VEQ5 465 aa17.51■□□□□ 0.39
HDDC3-201ENST00000330334 ARHGAP22Q7Z5H3 698 aa17.51■□□□□ 0.39
HDDC3-201ENST00000330334 CCDC50Q8IVM0 306 aa17.51■□□□□ 0.39
HDDC3-201ENST00000330334 TTC30BQ8N4P2 665 aa17.51■□□□□ 0.39
HDDC3-201ENST00000330334 BRSK1Q8TDC3 778 aa17.51■□□□□ 0.39
HDDC3-201ENST00000330334 KRT35Q92764 455 aa17.51■□□□□ 0.39
HDDC3-201ENST00000330334 ASPSCR1Q9BZE9 553 aa17.51■□□□□ 0.39
HDDC3-201ENST00000330334 WASH6PQ9NQA3 447 aa17.51■□□□□ 0.39
HDDC3-201ENST00000330334 KLC4Q9NSK0 619 aa17.51■□□□□ 0.39
HDDC3-201ENST00000330334 CPNE7Q9UBL6 633 aa17.51■□□□□ 0.39
HDDC3-201ENST00000330334 TFR2Q9UP52 801 aa17.51■□□□□ 0.39
HDDC3-201ENST00000330334 ZFC3H1O60293 1989 aaKnown RBP17.5■□□□□ 0.39
HDDC3-201ENST00000330334 LILRA5A6NI73 299 aa17.5■□□□□ 0.39
HDDC3-201ENST00000330334 STMND1H3BQB6 276 aa17.5■□□□□ 0.39
HDDC3-201ENST00000330334 SNX2O60749 519 aa17.5■□□□□ 0.39
HDDC3-201ENST00000330334 KCNJ13O60928 360 aa17.5■□□□□ 0.39
HDDC3-201ENST00000330334 CDK14O94921 469 aa17.5■□□□□ 0.39
HDDC3-201ENST00000330334 IPO7O95373 1038 aaKnown RBP17.5■□□□□ 0.39
HDDC3-201ENST00000330334 PRB1P04280 392 aa17.5■□□□□ 0.39
HDDC3-201ENST00000330334 ZNF7P17097 686 aaPredicted RBP17.5■□□□□ 0.39
HDDC3-201ENST00000330334 UBE2IP63279 158 aaKnown RBP17.5■□□□□ 0.39
HDDC3-201ENST00000330334 NOMO1Q15155 1222 aa17.5■□□□□ 0.39
HDDC3-201ENST00000330334 ATP13A5Q4VNC0 1218 aa17.5■□□□□ 0.39
HDDC3-201ENST00000330334 ABRAXAS1Q6UWZ7 409 aa17.5■□□□□ 0.39
HDDC3-201ENST00000330334 LRRTM4Q86VH4 590 aa17.5■□□□□ 0.39
HDDC3-201ENST00000330334 ZFAND4Q86XD8 727 aa17.5■□□□□ 0.39
HDDC3-201ENST00000330334 OXNAD1Q96HP4 312 aaPredicted RBP17.5■□□□□ 0.39
HDDC3-201ENST00000330334 FERMT1Q9BQL6 677 aa17.5■□□□□ 0.39
HDDC3-201ENST00000330334 ARFGAP3Q9NP61 516 aa17.5■□□□□ 0.39
HDDC3-201ENST00000330334 IL26Q9NPH9 171 aa17.5■□□□□ 0.39
HDDC3-201ENST00000330334 PRDM8Q9NQV8 689 aa17.5■□□□□ 0.39
HDDC3-201ENST00000330334 IL17CQ9P0M4 197 aa17.5■□□□□ 0.39
HDDC3-201ENST00000330334 SLC23A2Q9UGH3 650 aa17.5■□□□□ 0.39
HDDC3-201ENST00000330334 TMPRSS11EQ9UL52 423 aa17.5■□□□□ 0.39
HDDC3-201ENST00000330334 CCDC66A2RUB6 948 aa17.49■□□□□ 0.39
HDDC3-201ENST00000330334 RCCD1A6NED2 376 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms