RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 MTPNP58546 118 aa14.55□□□□□ -0.08
VPS36-207ENST00000611132 FOXM1Q08050 763 aa14.55□□□□□ -0.08
VPS36-207ENST00000611132 ACSM2AQ08AH3 577 aa14.55□□□□□ -0.08
VPS36-207ENST00000611132 PABPC1LQ4VXU2 614 aaKnown RBP14.55□□□□□ -0.08
VPS36-207ENST00000611132 ACSM2BQ68CK6 577 aa14.55□□□□□ -0.08
VPS36-207ENST00000611132 CHST15Q7LFX5 561 aaPredicted RBP14.55□□□□□ -0.08
VPS36-207ENST00000611132 ZC3H7AQ8IWR0 971 aaKnown RBP14.55□□□□□ -0.08
VPS36-207ENST00000611132 ANKLE1Q8NAG6 615 aa14.55□□□□□ -0.08
VPS36-207ENST00000611132 SMG8Q8ND04 991 aaKnown RBP14.55□□□□□ -0.08
VPS36-207ENST00000611132 OR10A6Q8NH74 314 aa14.55□□□□□ -0.08
VPS36-207ENST00000611132 TMBIM1Q969X1 311 aa14.55□□□□□ -0.08
VPS36-207ENST00000611132 MYLPFQ96A32 169 aa14.55□□□□□ -0.08
VPS36-207ENST00000611132 RTP4Q96DX8 246 aa14.55□□□□□ -0.08
VPS36-207ENST00000611132 NUSAP1Q9BXS6 441 aaKnown RBP14.55□□□□□ -0.08
VPS36-207ENST00000611132 AGO3Q9H9G7 860 aaKnown RBP14.55□□□□□ -0.08
VPS36-207ENST00000611132 SNX10Q9Y5X0 201 aa14.55□□□□□ -0.08
VPS36-207ENST00000611132 RPP40O75818 363 aaKnown RBP14.55□□□□□ -0.08
VPS36-207ENST00000611132 LMO2P25791 158 aa14.55□□□□□ -0.08
VPS36-207ENST00000611132 WNT7BP56706 349 aa14.55□□□□□ -0.08
VPS36-207ENST00000611132 ELP6Q0PNE2 266 aa14.55□□□□□ -0.08
VPS36-207ENST00000611132 GALNT3Q14435 633 aa14.55□□□□□ -0.08
VPS36-207ENST00000611132 PCBP1Q15365 356 aaKnown RBP eCLIP14.55□□□□□ -0.08
VPS36-207ENST00000611132 ZNF57Q68EA5 555 aaPredicted RBP14.55□□□□□ -0.08
VPS36-207ENST00000611132 ELMO1Q92556 727 aa14.55□□□□□ -0.08
VPS36-207ENST00000611132 MOCOSQ96EN8 888 aa14.55□□□□□ -0.08
VPS36-207ENST00000611132 LPIN3Q9BQK8 851 aa14.55□□□□□ -0.08
VPS36-207ENST00000611132 TLR8Q9NR97 1041 aaKnown RBP14.55□□□□□ -0.08
VPS36-207ENST00000611132 ARL15Q9NXU5 204 aa14.55□□□□□ -0.08
VPS36-207ENST00000611132 TSPAN1O60635 241 aa14.55□□□□□ -0.08
VPS36-207ENST00000611132 GRK3P35626 688 aa14.55□□□□□ -0.08
VPS36-207ENST00000611132 KPNA1P52294 538 aaPredicted RBP14.55□□□□□ -0.08
VPS36-207ENST00000611132 CDH18Q13634 790 aa14.55□□□□□ -0.08
VPS36-207ENST00000611132 MED22Q15528 200 aa14.55□□□□□ -0.08
VPS36-207ENST00000611132 C6orf183Q5T699 404 aa14.55□□□□□ -0.08
VPS36-207ENST00000611132 PGM2L1Q6PCE3 622 aa14.55□□□□□ -0.08
VPS36-207ENST00000611132 SIX5Q8N196 739 aa14.55□□□□□ -0.08
VPS36-207ENST00000611132 FCRL5Q96RD9 977 aa14.55□□□□□ -0.08
VPS36-207ENST00000611132 HDHD2Q9H0R4 259 aa14.55□□□□□ -0.08
VPS36-207ENST00000611132 PDP1Q9P0J1 537 aaPredicted RBP14.55□□□□□ -0.08
VPS36-207ENST00000611132 CPOXP36551 454 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 CNTN1Q12860 1018 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 QPRTQ15274 297 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 HID1Q8IV36 788 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 LGI2Q8N0V4 545 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 PHC3Q8NDX5 983 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 NTAN1Q96AB6 310 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 FCRL3Q96P31 734 aaPredicted RBP14.54□□□□□ -0.08
VPS36-207ENST00000611132 FBRSL1Q9HCM7 1045 aaKnown RBP14.54□□□□□ -0.08
VPS36-207ENST00000611132 SFMBT1Q9UHJ3 866 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 ZNHIT2Q9UHR6 403 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 KLHL20Q9Y2M5 609 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 PPP2R3BQ9Y5P8 575 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 FAM234BA2RU67 622 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 CHRNA4P43681 627 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 NDST2P52849 883 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 ARPC4P59998 168 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 RAP1GAP2Q684P5 730 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 NAPRTQ6XQN6 538 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 TXNDC5Q8NBS9 432 aaKnown RBP14.54□□□□□ -0.08
VPS36-207ENST00000611132 SPPL2BQ8TCT7 592 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 TRUB1Q8WWH5 349 aaKnown RBP14.54□□□□□ -0.08
VPS36-207ENST00000611132 STARD8Q92502 1023 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 SORT1Q99523 831 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 TUBA1CQ9BQE3 449 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 CLN6Q9NWW5 311 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 VPS28Q9UK41 221 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 ZNF214Q9UL59 606 aaPredicted RBP14.54□□□□□ -0.08
VPS36-207ENST00000611132 SIX3O95343 332 aaPredicted RBP14.54□□□□□ -0.08
VPS36-207ENST00000611132 STAU1O95793 577 aaKnown RBP14.54□□□□□ -0.08
VPS36-207ENST00000611132 ANXA5P08758 320 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 PAFAH1B3Q15102 231 aaKnown RBP14.54□□□□□ -0.08
VPS36-207ENST00000611132 TYSND1Q2T9J0 566 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 FGD3Q5JSP0 725 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 GNASQ5JWF2 1037 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 MZT2BQ6NZ67 158 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 RAB43Q86YS6 212 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 COLGALT2Q8IYK4 626 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 ANKFN1Q8N957 763 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 PANX1Q96RD7 426 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 ADAMTS10Q9H324 1103 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 SMOXQ9NWM0 555 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 SNX6Q9UNH7 406 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 ERGIC3Q9Y282 383 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 ALDH1A2O94788 518 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 C8BP07358 591 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 MYL12AP19105 171 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 GNPDA1P46926 289 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 DAOAP59103 153 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 CDKL1Q00532 357 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 EN1Q05925 392 aaPredicted RBP14.54□□□□□ -0.08
VPS36-207ENST00000611132 INCA1Q0VD86 236 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 KRT33BQ14525 404 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 SYPL2Q5VXT5 272 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 BHMTQ93088 406 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 MAGEE1Q9HCI5 957 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 MARCH2Q9P0N8 246 aa14.54□□□□□ -0.08
VPS36-207ENST00000611132 LSM7Q9UK45 103 aaKnown RBP14.54□□□□□ -0.08
VPS36-207ENST00000611132 OR4F21O95013 312 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 TSPAN19P0C672 248 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 PKMP14618 531 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms