RNA–Protein interactions for RNA: ENST00000610359.4

MUC1-221, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-221ENST00000610359 LRIG2O94898 1065 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 RAB40ALP0C0E4 278 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 EBLN1P0CF75 366 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 GOLGA6DP0CG33 693 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 F3P13726 295 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 LHCGRP22888 699 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 FLT3P36888 993 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 TSFMP43897 325 aaKnown RBP6.76□□□□□ -1.33
MUC1-221ENST00000610359 TDGF1P3P51864 188 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 ADORA2A-AS1P86434 159 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 OTUD4Q01804 1114 aaKnown RBP6.76□□□□□ -1.33
MUC1-221ENST00000610359 NRG1Q02297 640 aaPredicted RBP6.76□□□□□ -1.33
MUC1-221ENST00000610359 LTBQ06643 244 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 LRP8Q14114 963 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 GRM3Q14832 879 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 PLEKHS1Q5SXH7 462 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 PRAMEF17Q5VTA0 474 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 ZNF324BQ6AW86 544 aaPredicted RBP6.76□□□□□ -1.33
MUC1-221ENST00000610359 PLEKHA7Q6IQ23 1121 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 TMEM26Q6ZUK4 368 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 Q6ZVL8 140 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 ZNF765Q7L2R6 523 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 SRLQ86TD4 932 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 ZNF354CQ86Y25 554 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 GALNT13Q8IUC8 556 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 GALNT16Q8N428 558 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 ACBD4Q8NC06 268 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 SLC41A2Q96JW4 573 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 CFAP57Q96MR6 1250 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 PLEKHG4BQ96PX9 1271 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 TUBGCP5Q96RT8 1024 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 AGAP2Q99490 1192 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 WDR77Q9BQA1 342 aaPredicted RBP6.76□□□□□ -1.33
MUC1-221ENST00000610359 MLPHQ9BV36 600 aaPredicted RBP6.76□□□□□ -1.33
MUC1-221ENST00000610359 NLNQ9BYT8 704 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 SCAND2PQ9GZW5 306 aaPredicted RBP6.76□□□□□ -1.33
MUC1-221ENST00000610359 CXXC4Q9H2H0 198 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 STN1Q9H668 368 aaKnown RBP6.76□□□□□ -1.33
MUC1-221ENST00000610359 UCK1Q9HA47 277 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 PDFQ9HBH1 243 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 WASH6PQ9NQA3 447 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 GOLGA6AQ9NYA3 693 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 SEMA5BQ9P283 1151 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 CNOT8Q9UFF9 292 aaKnown RBP6.76□□□□□ -1.33
MUC1-221ENST00000610359 OR12D3Q9UGF7 316 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 ZNHIT2Q9UHR6 403 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 STAP1Q9ULZ2 295 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 KCNK6Q9Y257 313 aa6.76□□□□□ -1.33
MUC1-221ENST00000610359 HRNRQ86YZ3 2850 aaPredicted RBP6.75□□□□□ -1.33
MUC1-221ENST00000610359 KIR2DS5A0A0G2JLQ3 304 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 A0A0G2JNG1 304 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 FAM170AA1A519 330 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 CCDC78A2IDD5 438 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 BECN2A8MW95 431 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 J3KR12 359 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 KIR2DS3K7RE56 304 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 CCL21O00585 134 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 PCDH17O14917 1159 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 SNX2O60749 519 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 CPNE3O75131 537 aaKnown RBP6.75□□□□□ -1.33
MUC1-221ENST00000610359 SNRNP200O75643 2136 aaKnown RBP6.75□□□□□ -1.33
MUC1-221ENST00000610359 SCRG1O75711 98 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 HEXIM1O94992 359 aaKnown RBP6.75□□□□□ -1.33
MUC1-221ENST00000610359 YEATS4O95619 227 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 AMD1P17707 334 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 SERPINA4P29622 427 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 IST1P53990 364 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 PMS1P54277 932 aaKnown RBP6.75□□□□□ -1.33
MUC1-221ENST00000610359 PDE1BQ01064 536 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 FOXD4Q12950 439 aaPredicted RBP6.75□□□□□ -1.33
MUC1-221ENST00000610359 CUL4AQ13619 759 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 KIR2DS5Q14953 304 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 SKOR2Q2VWA4 1001 aaPredicted RBP6.75□□□□□ -1.33
MUC1-221ENST00000610359 FAM198BQ6UWH4 519 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 ADAMTSL4Q6UY14 1074 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 RPTNQ6XPR3 784 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 Q71RC1 249 aaPredicted RBP6.75□□□□□ -1.33
MUC1-221ENST00000610359 CXXC5Q7LFL8 322 aaKnown RBP6.75□□□□□ -1.33
MUC1-221ENST00000610359 CHST15Q7LFX5 561 aaPredicted RBP6.75□□□□□ -1.33
MUC1-221ENST00000610359 TECPR1Q7Z6L1 1165 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 CEP97Q8IW35 865 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 DSELQ8IZU8 1212 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 SIDT2Q8NBJ9 832 aaKnown RBP6.75□□□□□ -1.33
MUC1-221ENST00000610359 TSEN2Q8NCE0 465 aaKnown RBP6.75□□□□□ -1.33
MUC1-221ENST00000610359 EHBP1Q8NDI1 1231 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 CHTF18Q8WVB6 975 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 SHC3Q92529 594 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 NRGNQ92686 78 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 COX14Q96I36 57 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 HERPUD2Q9BSE4 406 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 TMEM121Q9BTD3 319 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 RETREG1Q9H6L5 497 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 ATP13A3Q9H7F0 1226 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 ZNF624Q9P2J8 865 aaPredicted RBP6.75□□□□□ -1.33
MUC1-221ENST00000610359 SUCOQ9UBS9 1254 aaKnown RBP6.75□□□□□ -1.33
MUC1-221ENST00000610359 UBA2Q9UBT2 640 aaPredicted RBP6.75□□□□□ -1.33
MUC1-221ENST00000610359 ARMCX3Q9UH62 379 aaPredicted RBP6.75□□□□□ -1.33
MUC1-221ENST00000610359 CD84Q9UIB8 345 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 PCDHGC3Q9UN70 934 aa6.75□□□□□ -1.33
MUC1-221ENST00000610359 TRGV8A0A0C4DH27 118 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms