RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 EQTNQ9NQ60 294 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 PRKAB1Q9Y478 270 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 EPHA3P29320 983 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 VHLP40337 213 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 UBAP2LQ14157 1087 aaKnown RBP17.23■□□□□ 0.35
PTPN21-208ENST00000556564 MYLK3Q32MK0 819 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 PIWIL4Q7Z3Z4 852 aaKnown RBP17.23■□□□□ 0.35
PTPN21-208ENST00000556564 LUZP2Q86TE4 346 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 CKAP2Q8WWK9 683 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 POLR1BQ9H9Y6 1135 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 PNPOQ9NVS9 261 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 MAT2BQ9NZL9 334 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 MRPS33Q9Y291 106 aaKnown RBP17.23■□□□□ 0.35
PTPN21-208ENST00000556564 STRCP1A6NGW2 1772 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 OR51F1A6NGY5 319 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 UGT1A9O60656 530 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 MTX2O75431 263 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 UGT1A6P19224 532 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 UGT1A1P22309 533 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 UGT1A4P22310 534 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 UGT1A3P35503 534 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 UGT1A5P35504 534 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 RTP2Q5QGT7 225 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 ICE2Q659A1 982 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 CUZD1Q86UP6 607 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 PRRG3Q9BZD7 231 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 UGT1A7Q9HAW7 530 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 UGT1A10Q9HAW8 530 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 UGT1A8Q9HAW9 530 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 ELOVL2Q9NXB9 296 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 MEIS3P2A8K0S8 358 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 PROCP04070 461 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 FASP25445 335 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 STX4Q12846 297 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 OR10T2Q8NGX3 314 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 YIPF3Q9GZM5 350 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 DUSP12Q9UNI6 340 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 TNFP01375 233 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 ALDH4A1P30038 563 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 RPL3P39023 403 aaKnown RBP17.22■□□□□ 0.35
PTPN21-208ENST00000556564 PPIDQ08752 370 aaKnown RBP17.22■□□□□ 0.35
PTPN21-208ENST00000556564 DCBLD1Q8N8Z6 715 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 TTC29Q8NA56 475 aaPredicted RBP17.22■□□□□ 0.35
PTPN21-208ENST00000556564 FCGR1AP12314 374 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 ACTR1BP42025 376 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 ACTR1AP61163 376 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 ZNF549Q6P9A3 640 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 R3HCC1LQ7Z5L2 792 aaKnown RBP17.22■□□□□ 0.35
PTPN21-208ENST00000556564 TMPRSS6Q8IU80 811 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 SLC44A1Q8WWI5 657 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 UGT2B28Q9BY64 529 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 NOL11Q9H8H0 719 aaKnown RBP17.22■□□□□ 0.35
PTPN21-208ENST00000556564 ATP6V1HQ9UI12 483 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 C2orf78A6NCI8 922 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 CLK1P49759 484 aaKnown RBP17.22■□□□□ 0.35
PTPN21-208ENST00000556564 MANFP55145 182 aaKnown RBP17.22■□□□□ 0.35
PTPN21-208ENST00000556564 INCA1Q0VD86 236 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 NFATC2Q13469 925 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 XKR4Q5GH76 650 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 SIRPB2Q5JXA9 342 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 AMZ2Q86W34 360 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 CPNE9Q8IYJ1 553 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 HERC2P3Q9BVR0 1158 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 MAPRE3Q9UPY8 281 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 TCRBV21S2A2A0A5A6 115 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 RASSF10A6NK89 507 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 GSNP06396 782 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 IL5RAQ01344 420 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 OR2AP1Q8NGE2 309 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 PANX1Q96RD7 426 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 HSD3B7Q9H2F3 369 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 SLC9A8Q9Y2E8 581 aa17.22■□□□□ 0.35
PTPN21-208ENST00000556564 CNTN5O94779 1100 aa17.21■□□□□ 0.35
PTPN21-208ENST00000556564 SNRPB2P08579 225 aaKnown RBP17.21■□□□□ 0.35
PTPN21-208ENST00000556564 VAV1P15498 845 aa17.21■□□□□ 0.35
PTPN21-208ENST00000556564 ALKBH2Q6NS38 261 aa17.21■□□□□ 0.35
PTPN21-208ENST00000556564 METTL21AQ8WXB1 218 aa17.21■□□□□ 0.35
PTPN21-208ENST00000556564 TGM5O43548 720 aa17.21■□□□□ 0.35
PTPN21-208ENST00000556564 BEST1O76090 585 aa17.21■□□□□ 0.35
PTPN21-208ENST00000556564 EN2P19622 333 aaPredicted RBP17.21■□□□□ 0.35
PTPN21-208ENST00000556564 SERPINB10P48595 397 aa17.21■□□□□ 0.35
PTPN21-208ENST00000556564 HSPA13P48723 471 aa17.21■□□□□ 0.35
PTPN21-208ENST00000556564 MINDY4Q4G0A6 757 aa17.21■□□□□ 0.35
PTPN21-208ENST00000556564 BHLHB9Q6PI77 547 aa17.21■□□□□ 0.35
PTPN21-208ENST00000556564 SLC30A9Q6PML9 568 aa17.21■□□□□ 0.35
PTPN21-208ENST00000556564 ZBTB49Q6ZSB9 765 aa17.21■□□□□ 0.35
PTPN21-208ENST00000556564 MCOLN1Q9GZU1 580 aa17.21■□□□□ 0.35
PTPN21-208ENST00000556564 MYH6P13533 1939 aa17.21■□□□□ 0.35
PTPN21-208ENST00000556564 HIST1H2ABP04908 130 aa17.21■□□□□ 0.35
PTPN21-208ENST00000556564 CLLU1OSQ5K130 101 aa17.21■□□□□ 0.35
PTPN21-208ENST00000556564 HIST3H2AQ7L7L0 130 aa17.21■□□□□ 0.35
PTPN21-208ENST00000556564 LYSMD3Q7Z3D4 306 aa17.21■□□□□ 0.35
PTPN21-208ENST00000556564 IFNLR1Q8IU57 520 aaPredicted RBP17.21■□□□□ 0.35
PTPN21-208ENST00000556564 HIST1H2ACQ93077 130 aa17.21■□□□□ 0.35
PTPN21-208ENST00000556564 ZNF599Q96NL3 588 aa17.21■□□□□ 0.35
PTPN21-208ENST00000556564 P2RY13Q9BPV8 354 aa17.21■□□□□ 0.35
PTPN21-208ENST00000556564 BIRC5O15392 142 aa17.21■□□□□ 0.35
PTPN21-208ENST00000556564 GKP32189 559 aa17.21■□□□□ 0.35
PTPN21-208ENST00000556564 NSG1P42857 185 aa17.21■□□□□ 0.35
PTPN21-208ENST00000556564 CASP12Q6UXS9 341 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms