RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 PLEKHG4BQ96PX9 1271 aa13.67□□□□□ -0.22
NKX3-1-202ENST00000523261 ZNHIT2Q9UHR6 403 aa13.67□□□□□ -0.22
NKX3-1-202ENST00000523261 CFAP45Q9UL16 551 aa13.67□□□□□ -0.22
NKX3-1-202ENST00000523261 TCFL5Q9UL49 500 aa13.67□□□□□ -0.22
NKX3-1-202ENST00000523261 ACANP16112 2415 aa13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 FAM170AA1A519 330 aa13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 PSMD11O00231 422 aa13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 CPNE3O75131 537 aaKnown RBP13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 ALPPP05187 535 aa13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 RAB40ALP0C0E4 278 aa13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 CD1EP15812 388 aa13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 EPHB2P29323 1055 aa13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 CAPZBP47756 277 aa13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 KCNAB1Q14722 419 aa13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 MYBPC3Q14896 1274 aa13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 SMTNL2Q2TAL5 461 aa13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 VWA2Q5GFL6 755 aa13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 ZNF658Q5TYW1 1059 aaPredicted RBP13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 LCN10Q6JVE6 187 aa13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 RFLNAQ6ZTI6 216 aa13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 FAM92BQ6ZTR7 304 aa13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 BPHLQ86WA6 291 aaPredicted RBP13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 TRIM59Q8IWR1 403 aa13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 PYROXD2Q8N2H3 581 aa13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 SIDT2Q8NBJ9 832 aaKnown RBP13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 SLC38A9Q8NBW4 561 aa13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 TMEM35BQ8NCS4 154 aa13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 GRHL3Q8TE85 626 aa13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 NANOS1Q8WY41 292 aaKnown RBP13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 SGSM3Q96HU1 749 aa13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 SLC41A2Q96JW4 573 aa13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 FAM81BQ96LP2 452 aa13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 ABCG8Q9H221 673 aa13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 ZNF552Q9H707 407 aaPredicted RBP13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 WASH6PQ9NQA3 447 aa13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 SEMA5BQ9P283 1151 aa13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 EPHA6Q9UF33 1036 aa13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 CD84Q9UIB8 345 aa13.66□□□□□ -0.22
NKX3-1-202ENST00000523261 IGHV5-51A0A0C4DH38 117 aa13.65□□□□□ -0.22
NKX3-1-202ENST00000523261 NPIPB15A6NHN6 443 aaPredicted RBP13.65□□□□□ -0.22
NKX3-1-202ENST00000523261 FAM155BO75949 473 aa13.65□□□□□ -0.22
NKX3-1-202ENST00000523261 ASMTLO95671 621 aa13.65□□□□□ -0.22
NKX3-1-202ENST00000523261 F13A1P00488 732 aa13.65□□□□□ -0.22
NKX3-1-202ENST00000523261 ACP5P13686 325 aa13.65□□□□□ -0.22
NKX3-1-202ENST00000523261 MARSP56192 900 aaKnown RBP13.65□□□□□ -0.22
NKX3-1-202ENST00000523261 APBA1Q02410 837 aa13.65□□□□□ -0.22
NKX3-1-202ENST00000523261 NSUN2Q08J23 767 aaKnown RBP eCLIP13.65□□□□□ -0.22
NKX3-1-202ENST00000523261 PAK1Q13153 545 aa13.65□□□□□ -0.22
NKX3-1-202ENST00000523261 PTPRRQ15256 657 aa13.65□□□□□ -0.22
NKX3-1-202ENST00000523261 CCDC14Q49A88 953 aa13.65□□□□□ -0.22
NKX3-1-202ENST00000523261 TRIM65Q6PJ69 517 aa13.65□□□□□ -0.22
NKX3-1-202ENST00000523261 TSPAN33Q86UF1 283 aa13.65□□□□□ -0.22
NKX3-1-202ENST00000523261 PARP9Q8IXQ6 854 aa13.65□□□□□ -0.22
NKX3-1-202ENST00000523261 ZADH2Q8N4Q0 377 aa13.65□□□□□ -0.22
NKX3-1-202ENST00000523261 FAR1Q8WVX9 515 aa13.65□□□□□ -0.22
NKX3-1-202ENST00000523261 SCAMP4Q969E2 229 aa13.65□□□□□ -0.22
NKX3-1-202ENST00000523261 ZDHHC12Q96GR4 267 aa13.65□□□□□ -0.22
NKX3-1-202ENST00000523261 AGAP2Q99490 1192 aa13.65□□□□□ -0.22
NKX3-1-202ENST00000523261 NLNQ9BYT8 704 aa13.65□□□□□ -0.22
NKX3-1-202ENST00000523261 LRRC19Q9H756 370 aa13.65□□□□□ -0.22
NKX3-1-202ENST00000523261 ZBTB20Q9HC78 741 aaPredicted RBP13.65□□□□□ -0.22
NKX3-1-202ENST00000523261 ZNF469Q96JG9 3925 aaPredicted RBP13.64□□□□□ -0.23
NKX3-1-202ENST00000523261 HTRA2O43464 458 aaPredicted RBP13.64□□□□□ -0.23
NKX3-1-202ENST00000523261 PALMO75781 387 aa13.64□□□□□ -0.23
NKX3-1-202ENST00000523261 CAPN1P07384 714 aa13.64□□□□□ -0.23
NKX3-1-202ENST00000523261 ZSCAN22P10073 491 aaPredicted RBP13.64□□□□□ -0.23
NKX3-1-202ENST00000523261 CYP2A6P11509 494 aaPredicted RBP13.64□□□□□ -0.23
NKX3-1-202ENST00000523261 XRCC1P18887 633 aaPredicted RBP13.64□□□□□ -0.23
NKX3-1-202ENST00000523261 SCNN1BP51168 640 aa13.64□□□□□ -0.23
NKX3-1-202ENST00000523261 AP1S1P61966 158 aa13.64□□□□□ -0.23
NKX3-1-202ENST00000523261 ACY1Q03154 408 aa13.64□□□□□ -0.23
NKX3-1-202ENST00000523261 IRGCQ6NXR0 463 aa13.64□□□□□ -0.23
NKX3-1-202ENST00000523261 TM9SF4Q92544 642 aa13.64□□□□□ -0.23
NKX3-1-202ENST00000523261 NTAN1Q96AB6 310 aa13.64□□□□□ -0.23
NKX3-1-202ENST00000523261 AP2M1Q96CW1 435 aa13.64□□□□□ -0.23
NKX3-1-202ENST00000523261 ZNF514Q96K75 400 aaPredicted RBP13.64□□□□□ -0.23
NKX3-1-202ENST00000523261 TRAPPC9Q96Q05 1148 aa13.64□□□□□ -0.23
NKX3-1-202ENST00000523261 CRACR2AQ9BSW2 395 aa13.64□□□□□ -0.23
NKX3-1-202ENST00000523261 TMUB1Q9BVT8 246 aa13.64□□□□□ -0.23
NKX3-1-202ENST00000523261 METTL5Q9NRN9 209 aaKnown RBP13.64□□□□□ -0.23
NKX3-1-202ENST00000523261 FGF21Q9NSA1 209 aa13.64□□□□□ -0.23
NKX3-1-202ENST00000523261 RMND1Q9NWS8 449 aa13.64□□□□□ -0.23
NKX3-1-202ENST00000523261 SCHIP1Q9P0W5 487 aaPredicted RBP13.64□□□□□ -0.23
NKX3-1-202ENST00000523261 VPS18Q9P253 973 aa13.64□□□□□ -0.23
NKX3-1-202ENST00000523261 CSAG2Q9Y5P2 127 aa13.64□□□□□ -0.23
NKX3-1-202ENST00000523261 CNTRLQ7Z7A1 2325 aa13.64□□□□□ -0.23
NKX3-1-202ENST00000523261 A0A0U1RQS6 177 aa13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 KCNN4O15554 427 aa13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 SCRG1O75711 98 aa13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 CPP00450 1065 aa13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 VIPP01282 170 aa13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 ATP1A1P05023 1023 aaKnown RBP13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 KLK3P07288 261 aaPredicted RBP13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 EBLN1P0CF75 366 aa13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 SLC19A1P41440 591 aa13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 PPP1CAP62136 330 aa13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 PNOCQ13519 176 aa13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 CERS6Q6ZMG9 384 aa13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 STRADAQ7RTN6 431 aa13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 MRGPRGQ86SM5 289 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms