RNA–Protein interactions for RNA: ENST00000510599.5

UBE2D3-230, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-230ENST00000510599 RTP4Q96DX8 246 aa4.48□□□□□ -1.69
UBE2D3-230ENST00000510599 XPO6Q96QU8 1125 aaKnown RBP4.48□□□□□ -1.69
UBE2D3-230ENST00000510599 PEBP4Q96S96 227 aa4.48□□□□□ -1.69
UBE2D3-230ENST00000510599 CCT8L2Q96SF2 557 aa4.48□□□□□ -1.69
UBE2D3-230ENST00000510599 TMEM121Q9BTD3 319 aa4.48□□□□□ -1.69
UBE2D3-230ENST00000510599 DDX23Q9BUQ8 820 aaKnown RBP4.48□□□□□ -1.69
UBE2D3-230ENST00000510599 APOL6Q9BWW8 343 aa4.48□□□□□ -1.69
UBE2D3-230ENST00000510599 DUSP16Q9BY84 665 aa4.48□□□□□ -1.69
UBE2D3-230ENST00000510599 NMRK2Q9NPI5 230 aa4.48□□□□□ -1.69
UBE2D3-230ENST00000510599 EURLQ9NYK6 297 aa4.48□□□□□ -1.69
UBE2D3-230ENST00000510599 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.48□□□□□ -1.69
UBE2D3-230ENST00000510599 SENP1Q9P0U3 644 aa4.48□□□□□ -1.69
UBE2D3-230ENST00000510599 PAK5Q9P286 719 aa4.48□□□□□ -1.69
UBE2D3-230ENST00000510599 PCSK1NQ9UHG2 260 aa4.48□□□□□ -1.69
UBE2D3-230ENST00000510599 SLC24A2Q9UI40 661 aa4.48□□□□□ -1.69
UBE2D3-230ENST00000510599 ZMYND8Q9ULU4 1186 aaPredicted RBP4.48□□□□□ -1.69
UBE2D3-230ENST00000510599 ST3GAL5Q9UNP4 418 aa4.48□□□□□ -1.69
UBE2D3-230ENST00000510599 GINS2Q9Y248 185 aa4.48□□□□□ -1.69
UBE2D3-230ENST00000510599 HES2Q9Y543 173 aa4.48□□□□□ -1.69
UBE2D3-230ENST00000510599 SF3B1O75533 1304 aaKnown RBP eCLIP4.47□□□□□ -1.692e-6■■■■■ 43.4
UBE2D3-230ENST00000510599 NYNRINQ9P2P1 1898 aaKnown RBP4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 CHD5Q8TDI0 1954 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 MYLKQ15746 1914 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 DENND4CQ5VZ89 1909 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 CCDC195A0A1B0GUA6 201 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 ARHGEF37A1IGU5 675 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 HACD1B0YJ81 288 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 TULP2O00295 520 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 CYB561D2O14569 222 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 TOR1BO14657 336 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 PTGESO14684 152 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 APOL1O14791 398 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 CHADO15335 359 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 INPPL1O15357 1258 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 DAB1O75553 588 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 SPAG6O75602 509 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 CABYRO75952 493 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 ACSL3O95573 720 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 CHRNA1P02708 482 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 THP07101 528 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 GSTA2P09210 222 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 CD48P09326 243 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 PDGFRBP09619 1106 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 ZSCAN5DPP0CG00 497 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 RARBP10826 455 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 ETS1P14921 441 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 CHN1P15882 459 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 PECAM1P16284 738 aaPredicted RBP4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 PPP3CBP16298 524 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 LMO2P25791 158 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 PHBP35232 272 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 PSMC4P43686 418 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 CCT5P48643 541 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 CTCFP49711 727 aaPredicted RBP4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 VPS41P49754 854 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 RGS7P49802 495 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 ZNF135P52742 658 aaPredicted RBP4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 HDAC4P56524 1084 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 ARL4CP56559 192 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 SCAND1P57086 179 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 CTXN1P60606 82 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 IFI35P80217 286 aaPredicted RBP4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 ROR1Q01973 937 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 TAF5Q15542 800 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 LONRF1Q17RB8 773 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 C15orf59Q2T9L4 293 aaPredicted RBP4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 SMTNL2Q2TAL5 461 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 KLHL38Q2WGJ6 581 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 SLC25A52Q3SY17 297 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 GLRA4Q5JXX5 417 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 TTC19Q6DKK2 380 aaPredicted RBP4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 DARS2Q6PI48 645 aaKnown RBP4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 C6orf89Q6UWU4 347 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 ZNF782Q6ZMW2 699 aaPredicted RBP4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 BEND5Q7L4P6 421 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 CDKL3Q8IVW4 592 aaPredicted RBP4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 UNC45BQ8IWX7 931 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 ADGRF2Q8IZF7 708 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 SCML4Q8N228 414 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 PLD5Q8N7P1 536 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 PCSK9Q8NBP7 692 aaKnown RBP4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 SLC2A14Q8TDB8 520 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 TRIB2Q92519 343 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 CPT1BQ92523 772 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 MAML1Q92585 1016 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 ARHGEF2Q92974 986 aaKnown RBP4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 PGAP3Q96FM1 320 aaPredicted RBP4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 CHMP6Q96FZ7 201 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 C9orf72Q96LT7 481 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 ZNF317Q96PQ6 595 aaPredicted RBP4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 SLC2A13Q96QE2 648 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 FAM118BQ9BPY3 351 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 SNRNP25Q9BV90 132 aaKnown RBP4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 CALN1Q9BXU9 219 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 DPEP3Q9H4B8 488 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 USP29Q9HBJ7 922 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 PNPLA8Q9NP80 782 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 SAYSD1Q9NPB0 183 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 PPANQ9NQ55 473 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms