RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 NDC80O14777 642 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 KLHL41O60662 606 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 NDUFS7O75251 213 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 CLDN14O95500 239 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 SKILP12757 684 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 ALOX12P18054 663 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 ATP5DP30049 168 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 HOXD13P35453 343 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 CPOXP36551 454 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 GAS1P54826 345 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 IFI35P80217 286 aaPredicted RBP3.17□□□□□ -1.9
RBM28-207ENST00000488249 PPARDQ03181 441 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 EEF1A2Q05639 463 aaKnown RBP3.17□□□□□ -1.9
RBM28-207ENST00000488249 DLG1Q12959 904 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 CUL4AQ13619 759 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 CALCRLQ16602 461 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 GSTA3Q16772 222 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 C2orf68Q2NKX9 166 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 GPR139Q6DWJ6 353 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 ANKRD54Q6NXT1 300 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 INO80CQ6PI98 192 aaPredicted RBP3.17□□□□□ -1.9
RBM28-207ENST00000488249 NUP54Q7Z3B4 507 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 CCDC91Q7Z6B0 441 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 ZER1Q7Z7L7 766 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 ZBTB2Q8N680 514 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 SMRP1Q8NCR6 262 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 IPMKQ8NFU5 416 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 CADM4Q8NFZ8 388 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 HUS1BQ8NHY5 278 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 NEK9Q8TD19 979 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 UTP15Q8TED0 518 aaKnown RBP3.17□□□□□ -1.9
RBM28-207ENST00000488249 PABPC5Q96DU9 382 aaKnown RBP3.17□□□□□ -1.9
RBM28-207ENST00000488249 SAAL1Q96ER3 474 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 AGAP3Q96P47 875 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 SLITRK1Q96PX8 696 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 NR1H4Q96RI1 486 aaPredicted RBP3.17□□□□□ -1.9
RBM28-207ENST00000488249 TEX13BQ9BXU2 312 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 C2orf40Q9H1Z8 148 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 ESRP2Q9H6T0 727 aaKnown RBP3.17□□□□□ -1.9
RBM28-207ENST00000488249 YY1AP1Q9H869 796 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 BRF2Q9HAW0 419 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 PREBQ9HCU5 417 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 NOX4Q9NPH5 578 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 ORC3Q9UBD5 711 aaPredicted RBP3.17□□□□□ -1.9
RBM28-207ENST00000488249 VPS28Q9UK41 221 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 RCOR1Q9UKL0 485 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 CAMK2AQ9UQM7 478 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 C2CD2Q9Y426 696 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 SNX9Q9Y5X1 595 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 STON1Q9Y6Q2 735 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 FLT1P17948 1338 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 CNTNAP2Q9UHC6 1331 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 KDM3AQ9Y4C1 1321 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 PI4KAP2A4QPH2 592 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 MAGEA13PA6NCF6 341 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 TMEM202A6NGA9 273 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 LRRC53A6NM62 1247 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 USP17L23D6RBM5 183 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 PRR23D1E9PI22 279 aaPredicted RBP3.16□□□□□ -1.9
RBM28-207ENST00000488249 H0Y626 953 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 SLC16A5O15375 505 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 ZBTB43O43298 467 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 TBCAO75347 108 aaKnown RBP3.16□□□□□ -1.9
RBM28-207ENST00000488249 SEC31AO94979 1220 aaKnown RBP3.16□□□□□ -1.9
RBM28-207ENST00000488249 SNX4O95219 450 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 AFPP02771 609 aaKnown RBP3.16□□□□□ -1.9
RBM28-207ENST00000488249 HOXB5P09067 269 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 PRR23D2P0DMB1 279 aaPredicted RBP3.16□□□□□ -1.9
RBM28-207ENST00000488249 GZMAP12544 262 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 SRCP12931 536 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 IL11P20809 199 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 EPHA8P29322 1005 aaPredicted RBP3.16□□□□□ -1.9
RBM28-207ENST00000488249 EIF2S3P41091 472 aaKnown RBP3.16□□□□□ -1.9
RBM28-207ENST00000488249 RAD23BP54727 409 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 EIF3BP55884 814 aaKnown RBP3.16□□□□□ -1.9
RBM28-207ENST00000488249 RPL36AP83881 106 aaKnown RBP3.16□□□□□ -1.9
RBM28-207ENST00000488249 SNTA1Q13424 505 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 WTAPQ15007 396 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 ATP13A5Q4VNC0 1218 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 PAPPA-AS1Q5QFB9 102 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 RAB12Q6IQ22 244 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 PLEKHA7Q6IQ23 1121 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 SHQ1Q6PI26 577 aaKnown RBP3.16□□□□□ -1.9
RBM28-207ENST00000488249 CEP97Q8IW35 865 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 CCDC170Q8IYT3 715 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 RNF168Q8IYW5 571 aaPredicted RBP3.16□□□□□ -1.9
RBM28-207ENST00000488249 OR8H3Q8N146 312 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 TDRD7Q8NHU6 1098 aaKnown RBP3.16□□□□□ -1.9
RBM28-207ENST00000488249 ANKRD49Q8WVL7 239 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 RFFLQ8WZ73 363 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 BICD1Q96G01 975 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 IGSF21Q96ID5 467 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 LMLNQ96KR4 655 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 TIGD1Q96MW7 591 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 C7orf26Q96N11 449 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 ZNF385AQ96PM9 386 aaKnown RBP3.16□□□□□ -1.9
RBM28-207ENST00000488249 CSF3RQ99062 836 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 KXD1Q9BQD3 176 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 HAUS8Q9BT25 410 aa3.16□□□□□ -1.9
RBM28-207ENST00000488249 FSD1Q9BTV5 496 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms