RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 GPR180Q86V85 440 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 PHTF2Q8N3S3 785 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 CENPIQ92674 756 aaPredicted RBP12.28□□□□□ -0.44
USP11-206ENST00000469080 MYEOVQ96EZ4 313 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 MAP6Q96JE9 813 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 CDK5RAP1Q96SZ6 601 aaKnown RBP12.28□□□□□ -0.44
USP11-206ENST00000469080 POMKQ9H5K3 350 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 AAR2Q9Y312 384 aaKnown RBP12.28□□□□□ -0.44
USP11-206ENST00000469080 WDR87Q6ZQQ6 2873 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 LRRC14BA6NHZ5 514 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 ARHGEF15O94989 841 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 DBTP11182 482 aaKnown RBP12.28□□□□□ -0.44
USP11-206ENST00000469080 MYL4P12829 197 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 PAMP19021 973 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 SLC1A2P43004 574 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 NRF1Q16656 503 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 ATXN7L2Q5T6C5 722 aaPredicted RBP12.28□□□□□ -0.44
USP11-206ENST00000469080 AKAP14Q86UN6 197 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 IGFN1Q86VF2 1251 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 MON1AQ86VX9 555 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 ZNF296Q8WUU4 475 aaPredicted RBP12.28□□□□□ -0.44
USP11-206ENST00000469080 FIG4Q92562 907 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 SEPT8Q92599 483 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 CINPQ9BW66 212 aaPredicted RBP12.28□□□□□ -0.44
USP11-206ENST00000469080 GATA5Q9BWX5 397 aaPredicted RBP12.28□□□□□ -0.44
USP11-206ENST00000469080 CERS4Q9HA82 394 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 PLAC1Q9HBJ0 212 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 COPG2Q9UBF2 871 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 STAU1O95793 577 aaKnown RBP12.27□□□□□ -0.44
USP11-206ENST00000469080 GEMP55040 296 aa12.27□□□□□ -0.44
USP11-206ENST00000469080 TLE2Q04725 743 aa12.27□□□□□ -0.44
USP11-206ENST00000469080 MOGQ16653 247 aa12.27□□□□□ -0.44
USP11-206ENST00000469080 SLC9B1Q4ZJI4 515 aa12.27□□□□□ -0.44
USP11-206ENST00000469080 ARL13AQ5H913 290 aaPredicted RBP12.27□□□□□ -0.44
USP11-206ENST00000469080 TXNDC8Q6A555 127 aa12.27□□□□□ -0.44
USP11-206ENST00000469080 DSG4Q86SJ6 1040 aa12.27□□□□□ -0.44
USP11-206ENST00000469080 CCDC28AQ8IWP9 274 aa12.27□□□□□ -0.44
USP11-206ENST00000469080 FSTL5Q8N475 847 aaPredicted RBP12.27□□□□□ -0.44
USP11-206ENST00000469080 FEM1CQ96JP0 617 aa12.27□□□□□ -0.44
USP11-206ENST00000469080 OR52B2Q96RD2 323 aa12.27□□□□□ -0.44
USP11-206ENST00000469080 TRIM8Q9BZR9 551 aa12.27□□□□□ -0.44
USP11-206ENST00000469080 ZYG11BQ9C0D3 744 aa12.27□□□□□ -0.44
USP11-206ENST00000469080 SP140LQ9H930 580 aa12.27□□□□□ -0.44
USP11-206ENST00000469080 COG4Q9H9E3 785 aa12.27□□□□□ -0.44
USP11-206ENST00000469080 DCDC2Q9UHG0 476 aa12.27□□□□□ -0.44
USP11-206ENST00000469080 ZFP37Q9Y6Q3 630 aaPredicted RBP12.27□□□□□ -0.44
USP11-206ENST00000469080 FAM159BA6NKW6 160 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 E5RI56 91 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 MEN1O00255 615 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 TRIM13O60858 407 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 RHOBTB1O94844 696 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 SIX3O95343 332 aaPredicted RBP12.27□□□□□ -0.45
USP11-206ENST00000469080 RHOCP08134 193 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 CCDC159P0C7I6 412 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 ZNF182P17025 639 aaPredicted RBP12.27□□□□□ -0.45
USP11-206ENST00000469080 EEF1DP29692 281 aaKnown RBP12.27□□□□□ -0.45
USP11-206ENST00000469080 PIK3CGP48736 1102 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 CDK18Q07002 472 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 CCNIQ14094 377 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 COL19A1Q14993 1142 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 PRKD1Q15139 912 aaPredicted RBP12.27□□□□□ -0.45
USP11-206ENST00000469080 FRA10AC1Q70Z53 315 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 NAT16Q8N8M0 369 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 ARL14EPQ8N8R7 260 aaPredicted RBP12.27□□□□□ -0.45
USP11-206ENST00000469080 SUSD3Q96L08 255 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 YME1L1Q96TA2 773 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 CPNE1Q99829 537 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 ATP13A3Q9H7F0 1226 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 TMEM39AQ9NV64 488 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 KCNN3Q9UGI6 736 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 RAB26Q9ULW5 256 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 POLHQ9Y253 713 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 BTRCQ9Y297 605 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 CPQQ9Y646 472 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 OTOFQ9HC10 1997 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 DOCK6Q96HP0 2047 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 IQCF5A8MTL0 148 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 SUPT3HB4E1H0 165 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 MAN1A2O60476 641 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 KATNA1O75449 491 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 CD1EP15812 388 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 ARSDP51689 593 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 ABCE1P61221 599 aaKnown RBP12.27□□□□□ -0.45
USP11-206ENST00000469080 STX1BP61266 288 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 SMAD3P84022 425 aaKnown RBP12.27□□□□□ -0.45
USP11-206ENST00000469080 CDH18Q13634 790 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 PFKFB4Q16877 469 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 AARS2Q5JTZ9 985 aaKnown RBP12.27□□□□□ -0.45
USP11-206ENST00000469080 TEDDM1Q5T9Z0 273 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 RSBN1Q5VWQ0 802 aaPredicted RBP12.27□□□□□ -0.45
USP11-206ENST00000469080 RBM23Q86U06 439 aaKnown RBP12.27□□□□□ -0.45
USP11-206ENST00000469080 SLC51BQ86UW2 128 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 SNX32Q86XE0 403 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 CEP97Q8IW35 865 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 CCDC117Q8IWD4 279 aaPredicted RBP12.27□□□□□ -0.45
USP11-206ENST00000469080 SPARTQ8N0X7 666 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 CPSF7Q8N684 471 aaKnown RBP12.27□□□□□ -0.45
USP11-206ENST00000469080 ZNF366Q8N895 744 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 FBXO22Q8NEZ5 403 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 PPWD1Q96BP3 646 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms