RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 FDFT1P37268 417 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 ZNF140P52738 457 aaPredicted RBP12.77□□□□□ -0.37
COL5A1-206ENST00000465877 LRP8Q14114 963 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 GSE1Q14687 1217 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 PTPRCAPQ14761 206 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 KHDC1Q4VXA5 237 aaKnown RBP12.77□□□□□ -0.37
COL5A1-206ENST00000465877 C14orf28Q4W4Y0 310 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 ZNF648Q5T619 568 aaPredicted RBP12.77□□□□□ -0.37
COL5A1-206ENST00000465877 CCNI2Q6ZMN8 369 aaPredicted RBP12.77□□□□□ -0.37
COL5A1-206ENST00000465877 PRUNE1Q86TP1 453 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 TMPRSS12Q86WS5 348 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 MARCH9Q86YJ5 346 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 SFTPA2Q8IWL1 248 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 RASGEF1CQ8N431 466 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 GLIS1Q8NBF1 620 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 MAPK15Q8TD08 544 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 BRSK1Q8TDC3 778 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 ZDHHC1Q8WTX9 485 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 CCDC74AQ96AQ1 378 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 CCDC3Q9BQI4 270 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 OR2AG1Q9H205 316 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 DPEP2Q9H4A9 486 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 RMI1Q9H9A7 625 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 IL26Q9NPH9 171 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 SMOXQ9NWM0 555 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 TAAR2Q9P1P5 351 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 ATXN10Q9UBB4 475 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 FKBPLQ9UIM3 349 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 TMPRSS11EQ9UL52 423 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 PYCARDQ9ULZ3 195 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 PADI4Q9UM07 663 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 CLCA2Q9UQC9 943 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 PRKAB1Q9Y478 270 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 PLEKHM1Q9Y4G2 1056 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 KMT2BQ9UMN6 2715 aaPredicted RBP12.76□□□□□ -0.37
COL5A1-206ENST00000465877 ERI2A8K979 691 aaKnown RBP12.76□□□□□ -0.37
COL5A1-206ENST00000465877 NUAK1O60285 661 aa12.76□□□□□ -0.37
COL5A1-206ENST00000465877 OPA1O60313 960 aa12.76□□□□□ -0.37
COL5A1-206ENST00000465877 MTX2O75431 263 aa12.76□□□□□ -0.37
COL5A1-206ENST00000465877 CRTAMO95727 393 aa12.76□□□□□ -0.37
COL5A1-206ENST00000465877 ACP5P13686 325 aa12.76□□□□□ -0.37
COL5A1-206ENST00000465877 ZNF8P17098 575 aaPredicted RBP12.76□□□□□ -0.37
COL5A1-206ENST00000465877 LPOP22079 712 aaPredicted RBP12.76□□□□□ -0.37
COL5A1-206ENST00000465877 PDE1BQ01064 536 aa12.76□□□□□ -0.37
COL5A1-206ENST00000465877 E2F1Q01094 437 aa12.76□□□□□ -0.37
COL5A1-206ENST00000465877 CCDC173Q0VFZ6 552 aa12.76□□□□□ -0.37
COL5A1-206ENST00000465877 MSLNQ13421 630 aaPredicted RBP12.76□□□□□ -0.37
COL5A1-206ENST00000465877 SEMA5AQ13591 1074 aa12.76□□□□□ -0.37
COL5A1-206ENST00000465877 ITGA9Q13797 1035 aa12.76□□□□□ -0.37
COL5A1-206ENST00000465877 HLTFQ14527 1009 aaKnown RBP eCLIP12.76□□□□□ -0.37
COL5A1-206ENST00000465877 CHRNA6Q15825 494 aa12.76□□□□□ -0.37
COL5A1-206ENST00000465877 CERCAMQ5T4B2 595 aa12.76□□□□□ -0.37
COL5A1-206ENST00000465877 CRTC3Q6UUV7 619 aa12.76□□□□□ -0.37
COL5A1-206ENST00000465877 CHST15Q7LFX5 561 aaPredicted RBP12.76□□□□□ -0.37
COL5A1-206ENST00000465877 ADGRG6Q86SQ4 1221 aa12.76□□□□□ -0.37
COL5A1-206ENST00000465877 PRELID2Q8N945 189 aa12.76□□□□□ -0.37
COL5A1-206ENST00000465877 OR4K2Q8NGD2 314 aa12.76□□□□□ -0.37
COL5A1-206ENST00000465877 OR13C4Q8NGS5 318 aa12.76□□□□□ -0.37
COL5A1-206ENST00000465877 GDAP1Q8TB36 358 aa12.76□□□□□ -0.37
COL5A1-206ENST00000465877 DTX3LQ8TDB6 740 aa12.76□□□□□ -0.37
COL5A1-206ENST00000465877 TRIM39Q9HCM9 518 aa12.76□□□□□ -0.37
COL5A1-206ENST00000465877 RAB6BQ9NRW1 208 aa12.76□□□□□ -0.37
COL5A1-206ENST00000465877 SPATS2LQ9NUQ6 558 aaKnown RBP12.76□□□□□ -0.37
COL5A1-206ENST00000465877 PIH1D1Q9NWS0 290 aaKnown RBP12.76□□□□□ -0.37
COL5A1-206ENST00000465877 PAK5Q9P286 719 aa12.76□□□□□ -0.37
COL5A1-206ENST00000465877 ZNHIT2Q9UHR6 403 aa12.76□□□□□ -0.37
COL5A1-206ENST00000465877 RABGEF1Q9UJ41 708 aa12.76□□□□□ -0.37
COL5A1-206ENST00000465877 KCTD3Q9Y597 815 aa12.76□□□□□ -0.37
COL5A1-206ENST00000465877 E7EVH7 732 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 PGRMC1O00264 195 aaKnown RBP12.75□□□□□ -0.37
COL5A1-206ENST00000465877 CHUKO15111 745 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 PSMD3O43242 534 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 GRID2O43424 1007 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 LDB2O43679 373 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 VEGFDO43915 354 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 SUN1O94901 812 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 ZSCAN5DPP0CG00 497 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 LMAN1P49257 510 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 MAZP56270 477 aaKnown RBP12.75□□□□□ -0.37
COL5A1-206ENST00000465877 CDH17Q12864 832 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 PEX6Q13608 980 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 SEPT6Q14141 434 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 POU6F1Q14863 301 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 KIF26BQ2KJY2 2108 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 PLA2G4EQ3MJ16 856 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 CDCP2Q5VXM1 449 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 OGFOD3Q6PK18 319 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 GSTA5Q7RTV2 222 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 LINC00523Q86TU6 105 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 NAGSQ8N159 534 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 DCBLD1Q8N8Z6 715 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 DDHD1Q8NEL9 900 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 OR6C4Q8NGE1 309 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 PATE1Q8WXA2 126 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 MS4A14Q96JA4 679 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 PBKQ96KB5 322 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 DNAJC1Q96KC8 554 aaKnown RBP12.75□□□□□ -0.37
COL5A1-206ENST00000465877 OSBPL9Q96SU4 736 aa12.75□□□□□ -0.37
COL5A1-206ENST00000465877 ZCCHC2Q9C0B9 1178 aaKnown RBP12.75□□□□□ -0.37
COL5A1-206ENST00000465877 SYNDIG1Q9H7V2 258 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms