RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 KLHL35Q6PF15 583 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 DHRSXQ8N5I4 330 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 SMG8Q8ND04 991 aaKnown RBP11.47□□□□□ -0.57
PTCH1-208ENST00000430669 OR52E6Q96RD3 313 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 MAN1C1Q9NR34 630 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 TELO2Q9Y4R8 837 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 RANBP1P43487 201 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 ERICH5Q6P6B1 374 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 CASP12Q6UXS9 341 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 FAM92BQ6ZTR7 304 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 Q96MT0 163 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 ZNF607Q96SK3 696 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 LRTM1Q9HBL6 345 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 SIPA1L1O43166 1804 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 CHN2P52757 468 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 DOK6Q6PKX4 331 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 C17orf99Q6UX52 265 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 MTFMTQ96DP5 389 aaKnown RBP11.47□□□□□ -0.57
PTCH1-208ENST00000430669 AIF1LQ9BQI0 150 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 C3orf18Q9UK00 162 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 FBXL21Q9UKT6 434 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 CPQQ9Y646 472 aa11.47□□□□□ -0.57
PTCH1-208ENST00000430669 ZNF865P0CJ78 1059 aaPredicted RBP11.46□□□□□ -0.57
PTCH1-208ENST00000430669 GNPDA1P46926 289 aa11.46□□□□□ -0.57
PTCH1-208ENST00000430669 RPL38P63173 70 aaKnown RBP11.46□□□□□ -0.57
PTCH1-208ENST00000430669 MFSD4BQ5TF39 518 aa11.46□□□□□ -0.57
PTCH1-208ENST00000430669 CDYL2Q8N8U2 506 aa11.46□□□□□ -0.57
PTCH1-208ENST00000430669 ZNF461Q8TAF7 563 aa11.46□□□□□ -0.57
PTCH1-208ENST00000430669 PHF21AQ96BD5 680 aa11.46□□□□□ -0.57
PTCH1-208ENST00000430669 DNAJC11Q9NVH1 559 aa11.46□□□□□ -0.57
PTCH1-208ENST00000430669 OXSMQ9NWU1 459 aa11.46□□□□□ -0.57
PTCH1-208ENST00000430669 C9IYK1 514 aa11.46□□□□□ -0.57
PTCH1-208ENST00000430669 RASSF9O75901 435 aa11.46□□□□□ -0.57
PTCH1-208ENST00000430669 SOX11P35716 441 aa11.46□□□□□ -0.57
PTCH1-208ENST00000430669 ARL13AQ5H913 290 aaPredicted RBP11.46□□□□□ -0.57
PTCH1-208ENST00000430669 SIRPB2Q5JXA9 342 aa11.46□□□□□ -0.57
PTCH1-208ENST00000430669 ATAT1Q5SQI0 421 aa11.46□□□□□ -0.57
PTCH1-208ENST00000430669 OTOP2Q7RTS6 562 aa11.46□□□□□ -0.57
PTCH1-208ENST00000430669 CPSF7Q8N684 471 aaKnown RBP11.46□□□□□ -0.57
PTCH1-208ENST00000430669 SMG7Q92540 1137 aaKnown RBP11.46□□□□□ -0.57
PTCH1-208ENST00000430669 HEPHQ9BQS7 1158 aa11.46□□□□□ -0.57
PTCH1-208ENST00000430669 RNF39Q9H2S5 420 aa11.46□□□□□ -0.57
PTCH1-208ENST00000430669 TMEM63AO94886 807 aa11.46□□□□□ -0.57
PTCH1-208ENST00000430669 HAPLN1P10915 354 aaPredicted RBP11.46□□□□□ -0.57
PTCH1-208ENST00000430669 SLC18A2Q05940 514 aa11.46□□□□□ -0.57
PTCH1-208ENST00000430669 ESRP1Q6NXG1 681 aaKnown RBP11.46□□□□□ -0.57
PTCH1-208ENST00000430669 ABRAXAS1Q6UWZ7 409 aa11.46□□□□□ -0.57
PTCH1-208ENST00000430669 SPPL2AQ8TCT8 520 aa11.46□□□□□ -0.57
PTCH1-208ENST00000430669 PEBP4Q96S96 227 aa11.46□□□□□ -0.57
PTCH1-208ENST00000430669 IL36AQ9UHA7 158 aa11.46□□□□□ -0.57
PTCH1-208ENST00000430669 ZNF490Q9ULM2 529 aaPredicted RBP11.46□□□□□ -0.57
PTCH1-208ENST00000430669 H3BM21 787 aa11.46□□□□□ -0.57
PTCH1-208ENST00000430669 ATP6V1C1P21283 382 aa11.46□□□□□ -0.57
PTCH1-208ENST00000430669 ATXN1P54253 815 aaKnown RBP11.46□□□□□ -0.57
PTCH1-208ENST00000430669 CA9Q16790 459 aa11.46□□□□□ -0.57
PTCH1-208ENST00000430669 PNPOQ9NVS9 261 aa11.46□□□□□ -0.57
PTCH1-208ENST00000430669 ADAM30Q9UKF2 790 aa11.46□□□□□ -0.57
PTCH1-208ENST00000430669 MT-CO1P00395 513 aa11.46□□□□□ -0.58
PTCH1-208ENST00000430669 ZNF30P17039 623 aa11.46□□□□□ -0.58
PTCH1-208ENST00000430669 DNAJC1Q96KC8 554 aaKnown RBP11.46□□□□□ -0.58
PTCH1-208ENST00000430669 ZMAT2Q96NC0 199 aaKnown RBP11.46□□□□□ -0.58
PTCH1-208ENST00000430669 TUBGCP5Q96RT8 1024 aa11.46□□□□□ -0.58
PTCH1-208ENST00000430669 SMOQ99835 787 aa11.46□□□□□ -0.58
PTCH1-208ENST00000430669 TDRD1Q9BXT4 1180 aaKnown RBP11.46□□□□□ -0.58
PTCH1-208ENST00000430669 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.46□□□□□ -0.58
PTCH1-208ENST00000430669 RFXANKO14593 260 aa11.46□□□□□ -0.58
PTCH1-208ENST00000430669 PPEF2O14830 753 aa11.46□□□□□ -0.58
PTCH1-208ENST00000430669 METTL18O95568 372 aa11.46□□□□□ -0.58
PTCH1-208ENST00000430669 HOXA11P31270 313 aaPredicted RBP11.46□□□□□ -0.58
PTCH1-208ENST00000430669 TRPC1P48995 793 aa11.46□□□□□ -0.58
PTCH1-208ENST00000430669 MRPL10Q7Z7H8 261 aaKnown RBP11.46□□□□□ -0.58
PTCH1-208ENST00000430669 GPR180Q86V85 440 aa11.46□□□□□ -0.58
PTCH1-208ENST00000430669 PACS2Q86VP3 889 aa11.46□□□□□ -0.58
PTCH1-208ENST00000430669 LRRN4Q8WUT4 740 aa11.46□□□□□ -0.58
PTCH1-208ENST00000430669 GPR21Q99679 349 aa11.46□□□□□ -0.58
PTCH1-208ENST00000430669 GPR22Q99680 433 aa11.46□□□□□ -0.58
PTCH1-208ENST00000430669 CRTAC1Q9NQ79 661 aa11.46□□□□□ -0.58
PTCH1-208ENST00000430669 PSMA3P25788 255 aa11.46□□□□□ -0.58
PTCH1-208ENST00000430669 NEK2P51955 445 aa11.46□□□□□ -0.58
PTCH1-208ENST00000430669 CACNA2D1P54289 1103 aa11.46□□□□□ -0.58
PTCH1-208ENST00000430669 PRR23BQ6ZRT6 265 aa11.46□□□□□ -0.58
PTCH1-208ENST00000430669 OSTM1Q86WC4 334 aa11.46□□□□□ -0.58
PTCH1-208ENST00000430669 TBATAQ96M53 351 aa11.46□□□□□ -0.58
PTCH1-208ENST00000430669 KIFC1Q9BW19 673 aa11.46□□□□□ -0.58
PTCH1-208ENST00000430669 PIF1Q9H611 641 aa11.46□□□□□ -0.58
PTCH1-208ENST00000430669 CDH22Q9UJ99 828 aa11.46□□□□□ -0.58
PTCH1-208ENST00000430669 IDH3AP50213 366 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 CLCQ05315 142 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 MS4A13Q5J8X5 152 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 SERPINA9Q86WD7 417 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 C17orf64Q86WR6 236 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 CELF5Q8N6W0 485 aaKnown RBP11.45□□□□□ -0.58
PTCH1-208ENST00000430669 CXorf40BQ96DE9 158 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 LPIN3Q9BQK8 851 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 SYNDIG1Q9H7V2 258 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 ZFP14Q9HCL3 533 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 TLR9Q9NR96 1032 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 SEMA3GQ9NS98 782 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 DNAJB4Q9UDY4 337 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 PATJQ8NI35 1801 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms