RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 FOXR1Q6PIV2 292 aa11.1□□□□□ -0.63
RFFL-204ENST00000414419 LRRC69Q6ZNQ3 347 aa11.1□□□□□ -0.63
RFFL-204ENST00000414419 ARHGEF18Q6ZSZ5 1173 aa11.1□□□□□ -0.63
RFFL-204ENST00000414419 LRRC8AQ8IWT6 810 aa11.1□□□□□ -0.63
RFFL-204ENST00000414419 ARL14Q8N4G2 192 aa11.1□□□□□ -0.63
RFFL-204ENST00000414419 GDAP1Q8TB36 358 aa11.1□□□□□ -0.63
RFFL-204ENST00000414419 CCDC110Q8TBZ0 833 aa11.1□□□□□ -0.63
RFFL-204ENST00000414419 GLYATL1Q969I3 302 aa11.1□□□□□ -0.63
RFFL-204ENST00000414419 ATXN7L3BQ96GX2 97 aa11.1□□□□□ -0.63
RFFL-204ENST00000414419 SPATA13Q96N96 652 aa11.1□□□□□ -0.63
RFFL-204ENST00000414419 TTC25Q96NG3 672 aa11.1□□□□□ -0.63
RFFL-204ENST00000414419 DCBLD2Q96PD2 775 aa11.1□□□□□ -0.63
RFFL-204ENST00000414419 FICDQ9BVA6 458 aa11.1□□□□□ -0.63
RFFL-204ENST00000414419 STRADBQ9C0K7 418 aa11.1□□□□□ -0.63
RFFL-204ENST00000414419 OR2AG1Q9H205 316 aa11.1□□□□□ -0.63
RFFL-204ENST00000414419 STN1Q9H668 368 aaKnown RBP11.1□□□□□ -0.63
RFFL-204ENST00000414419 POLR1BQ9H9Y6 1135 aa11.1□□□□□ -0.63
RFFL-204ENST00000414419 ARFGAP3Q9NP61 516 aa11.1□□□□□ -0.63
RFFL-204ENST00000414419 LZTFL1Q9NQ48 299 aa11.1□□□□□ -0.63
RFFL-204ENST00000414419 ATXN10Q9UBB4 475 aa11.1□□□□□ -0.63
RFFL-204ENST00000414419 NFKBIL1Q9UBC1 381 aaPredicted RBP11.1□□□□□ -0.63
RFFL-204ENST00000414419 RABGEF1Q9UJ41 708 aa11.1□□□□□ -0.63
RFFL-204ENST00000414419 PRKAB1Q9Y478 270 aa11.1□□□□□ -0.63
RFFL-204ENST00000414419 PLEKHM1Q9Y4G2 1056 aa11.1□□□□□ -0.63
RFFL-204ENST00000414419 ENTPD2Q9Y5L3 495 aa11.1□□□□□ -0.63
RFFL-204ENST00000414419 FREM2Q5SZK8 3169 aa11.1□□□□□ -0.63
RFFL-204ENST00000414419 COL27A1Q8IZC6 1860 aaPredicted RBP11.1□□□□□ -0.63
RFFL-204ENST00000414419 ADAMTS20P59510 1910 aa11.09□□□□□ -0.63
RFFL-204ENST00000414419 C2orf81A6NN90 581 aa11.09□□□□□ -0.63
RFFL-204ENST00000414419 D6RAR5 112 aa11.09□□□□□ -0.63
RFFL-204ENST00000414419 PPFIA2O75334 1257 aa11.09□□□□□ -0.63
RFFL-204ENST00000414419 ACP5P13686 325 aa11.09□□□□□ -0.63
RFFL-204ENST00000414419 SLC2A4P14672 509 aa11.09□□□□□ -0.63
RFFL-204ENST00000414419 SPAM1P38567 509 aa11.09□□□□□ -0.63
RFFL-204ENST00000414419 RPS6KA1Q15418 735 aa11.09□□□□□ -0.63
RFFL-204ENST00000414419 SPRED1Q7Z699 444 aa11.09□□□□□ -0.63
RFFL-204ENST00000414419 SFTPA2Q8IWL1 248 aa11.09□□□□□ -0.63
RFFL-204ENST00000414419 NAGSQ8N159 534 aa11.09□□□□□ -0.63
RFFL-204ENST00000414419 FAM71DQ8N9W8 422 aa11.09□□□□□ -0.63
RFFL-204ENST00000414419 WDR36Q8NI36 951 aaKnown RBP11.09□□□□□ -0.63
RFFL-204ENST00000414419 BRSK1Q8TDC3 778 aa11.09□□□□□ -0.63
RFFL-204ENST00000414419 FGF11Q92914 225 aa11.09□□□□□ -0.63
RFFL-204ENST00000414419 TMEM74Q96NL1 305 aa11.09□□□□□ -0.63
RFFL-204ENST00000414419 EPB41L5Q9HCM4 733 aa11.09□□□□□ -0.63
RFFL-204ENST00000414419 IL17CQ9P0M4 197 aa11.09□□□□□ -0.63
RFFL-204ENST00000414419 SATB2Q9UPW6 733 aa11.09□□□□□ -0.63
RFFL-204ENST00000414419 WDFY3Q8IZQ1 3526 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 TRBV23OR9-2A0A075B6M9 112 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 CCDC187A0A096LP49 1063 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 GLYATL1P3A0A0U1RQE8 302 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 A0A1W2PQM1 296 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 C5orf60A6NFR6 353 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 KMOO15229 486 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 CASC3O15234 703 aaKnown RBP11.08□□□□□ -0.64
RFFL-204ENST00000414419 BUD23O43709 281 aaKnown RBP11.08□□□□□ -0.64
RFFL-204ENST00000414419 VEGFDO43915 354 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 SNX2O60749 519 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 CDK14O94921 469 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 CRTAMO95727 393 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 ZNF8P17098 575 aaPredicted RBP11.08□□□□□ -0.64
RFFL-204ENST00000414419 LPOP22079 712 aaPredicted RBP11.08□□□□□ -0.64
RFFL-204ENST00000414419 GPR3P46089 330 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 INHBCP55103 352 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 PDE1BQ01064 536 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 KLF1Q13351 362 aaPredicted RBP11.08□□□□□ -0.64
RFFL-204ENST00000414419 ITGA9Q13797 1035 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 TAF1AQ15573 450 aaPredicted RBP11.08□□□□□ -0.64
RFFL-204ENST00000414419 INSCQ1MX18 579 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 PARP6Q2NL67 630 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 P3H1Q32P28 736 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 TBC1D25Q3MII6 688 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 AMZ1Q400G9 498 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 MAP9Q49MG5 647 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 ATP13A5Q4VNC0 1218 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 ZNF648Q5T619 568 aaPredicted RBP11.08□□□□□ -0.64
RFFL-204ENST00000414419 FAM151BQ6UXP7 276 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 RANBP10Q6VN20 620 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 ADGRG6Q86SQ4 1221 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 PIM3Q86V86 326 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 LRRTM4Q86VH4 590 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 C17orf82Q86X59 251 aaPredicted RBP11.08□□□□□ -0.64
RFFL-204ENST00000414419 TTC30BQ8N4P2 665 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 HNRNPLLQ8WVV9 542 aaKnown RBP11.08□□□□□ -0.64
RFFL-204ENST00000414419 PATE1Q8WXA2 126 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 ZNF578Q96N58 590 aaPredicted RBP11.08□□□□□ -0.64
RFFL-204ENST00000414419 VPS35Q96QK1 796 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 TBL1YQ9BQ87 522 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 APOL2Q9BQE5 337 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 TMEM121Q9BTD3 319 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 FRMD8P1Q9BZ68 369 aaPredicted RBP11.08□□□□□ -0.64
RFFL-204ENST00000414419 ZCCHC2Q9C0B9 1178 aaKnown RBP11.08□□□□□ -0.64
RFFL-204ENST00000414419 ZMYND15Q9H091 742 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 OSGEPL1Q9H4B0 414 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 THSD1Q9NS62 852 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 FEZ2Q9UHY8 353 aaPredicted RBP11.08□□□□□ -0.64
RFFL-204ENST00000414419 ATXN7L1Q9ULK2 861 aaPredicted RBP11.08□□□□□ -0.64
RFFL-204ENST00000414419 KCNK6Q9Y257 313 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 ST14Q9Y5Y6 855 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 PKD1L2Q7Z442 2459 aa11.08□□□□□ -0.64
RFFL-204ENST00000414419 OR5K4A6NMS3 321 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms