RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 SYT12Q8IV01 421 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 YAF2Q8IY57 180 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 ENDOVQ8N8Q3 282 aaKnown RBP8.41□□□□□ -1.06
PTPRK-206ENST00000368215 TPD52L3Q96J77 140 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 CAPNS2Q96L46 248 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 BBS2Q9BXC9 721 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 RHBDL2Q9NX52 303 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 GALPQ9UBC7 116 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 CD84Q9UIB8 345 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 EMCNQ9ULC0 261 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 NME7Q9Y5B8 376 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 A0A088AWK7 358 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 CCDC189A1A4V9 331 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 LRRC14BA6NHZ5 514 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 GSNP06396 782 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 GJA1P17302 382 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 ITPKAP23677 461 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 CYP4F8P98187 520 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 SMARCB1Q12824 385 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 ILF2Q12905 390 aaKnown RBP8.41□□□□□ -1.06
PTPRK-206ENST00000368215 SFT2D3Q587I9 215 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 ALKAL1Q6UXT8 129 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 C11orf74Q86VG3 221 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 C8orf48Q96LL4 319 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.41□□□□□ -1.06
PTPRK-206ENST00000368215 GJB5O95377 273 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 MAGEA6P43360 314 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 POLR2JP52435 117 aaKnown RBP8.41□□□□□ -1.06
PTPRK-206ENST00000368215 HERVK_113P63132 956 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 ACSM2AQ08AH3 577 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 HIST2H2ACQ16777 129 aaPredicted RBP8.41□□□□□ -1.06
PTPRK-206ENST00000368215 LIN52Q52LA3 116 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 ACSM2BQ68CK6 577 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 HIST2H2AA3Q6FI13 130 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 CYP4V2Q6ZWL3 525 aaPredicted RBP8.41□□□□□ -1.06
PTPRK-206ENST00000368215 ZNF598Q86UK7 904 aaKnown RBP8.41□□□□□ -1.06
PTPRK-206ENST00000368215 LINC01465Q8N7H1 131 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 OR2T34Q8NGX1 318 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 OR2T3Q8NH03 318 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 PPP3R2Q96LZ3 170 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 OLFM1Q99784 485 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 ERVK-6Q9BXR3 956 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 C1orf21Q9H246 121 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 ARIH1Q9Y4X5 557 aaPredicted RBP8.41□□□□□ -1.06
PTPRK-206ENST00000368215 ACTL7AQ9Y615 435 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 GLYATL1P3A0A0U1RQE8 302 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 NEDD8-MDP1E9PL57 170 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 ECI2O75521 394 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 WDR47O94967 919 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 ADSLP30566 484 aaPredicted RBP8.4□□□□□ -1.06
PTPRK-206ENST00000368215 LIPEQ05469 1076 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 ADGRE1Q14246 886 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 PLCL1Q15111 1095 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 ZNF697Q5TEC3 545 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 TXNDC8Q6A555 127 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 C17orf99Q6UX52 265 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 SCD5Q86SK9 330 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 TRAPPC5Q8IUR0 188 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 CBR4Q8N4T8 237 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 SPPL2AQ8TCT8 520 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 COQ10BQ9H8M1 238 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 ASAH2Q9NR71 780 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 SCN3BQ9NY72 215 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 U3KQV3 271 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 M0R3G1 203 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 PRSS56P0CW18 603 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 POLR2EP19388 210 aaKnown RBP8.4□□□□□ -1.06
PTPRK-206ENST00000368215 OGNP20774 298 aaKnown RBP8.4□□□□□ -1.06
PTPRK-206ENST00000368215 GGT5P36269 586 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 SERINC3Q13530 473 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 PM20D1Q6GTS8 502 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 DOK6Q6PKX4 331 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 CLDN19Q8N6F1 224 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 GPR156Q8NFN8 814 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 MZB1Q8WU39 189 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 OR52E6Q96RD3 313 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 IL12RB2Q99665 862 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 HOPXQ9BPY8 73 aaPredicted RBP8.4□□□□□ -1.06
PTPRK-206ENST00000368215 TMEM106CQ9BVX2 250 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 TRIM8Q9BZR9 551 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 ATG10Q9H0Y0 220 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 OSGEPL1Q9H4B0 414 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 ZBTB26Q9HCK0 441 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 TMEM248Q9NWD8 314 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 PTGDR2Q9Y5Y4 395 aa8.4□□□□□ -1.06
PTPRK-206ENST00000368215 COL11A2P13942 1736 aaPredicted RBP8.4□□□□□ -1.06
PTPRK-206ENST00000368215 G3V2L1 256 aa8.4□□□□□ -1.07
PTPRK-206ENST00000368215 FYNP06241 537 aa8.4□□□□□ -1.07
PTPRK-206ENST00000368215 MTHFD1P11586 935 aaKnown RBP8.4□□□□□ -1.07
PTPRK-206ENST00000368215 COX7A2P14406 83 aa8.4□□□□□ -1.07
PTPRK-206ENST00000368215 POU1F1P28069 291 aa8.4□□□□□ -1.07
PTPRK-206ENST00000368215 CSKP41240 450 aa8.4□□□□□ -1.07
PTPRK-206ENST00000368215 XIAPP98170 497 aa8.4□□□□□ -1.07
PTPRK-206ENST00000368215 CREB5Q02930 508 aa8.4□□□□□ -1.07
PTPRK-206ENST00000368215 BNIP2Q12982 314 aa8.4□□□□□ -1.07
PTPRK-206ENST00000368215 GPR17Q13304 367 aa8.4□□□□□ -1.07
PTPRK-206ENST00000368215 TAF1AQ15573 450 aaPredicted RBP8.4□□□□□ -1.07
PTPRK-206ENST00000368215 OTOP2Q7RTS6 562 aa8.4□□□□□ -1.07
PTPRK-206ENST00000368215 IMP4Q96G21 291 aaKnown RBP8.4□□□□□ -1.07
PTPRK-206ENST00000368215 CEP19Q96LK0 163 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms