RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 CADM3Q8N126 398 aa17.72■□□□□ 0.43
APP-202ENST00000348990 PDPRQ8NCN5 879 aa17.72■□□□□ 0.43
APP-202ENST00000348990 ZNF419Q96HQ0 510 aaPredicted RBP17.72■□□□□ 0.43
APP-202ENST00000348990 ALPK1Q96QP1 1244 aa17.72■□□□□ 0.43
APP-202ENST00000348990 SMOQ99835 787 aa17.72■□□□□ 0.43
APP-202ENST00000348990 DERAQ9Y315 318 aa17.72■□□□□ 0.43
APP-202ENST00000348990 PCDHGA8Q9Y5G5 932 aa17.72■□□□□ 0.43
APP-202ENST00000348990 A0A1B0GTL3 188 aa17.71■□□□□ 0.43
APP-202ENST00000348990 AQP9O43315 295 aa17.71■□□□□ 0.43
APP-202ENST00000348990 CNTN5O94779 1100 aa17.71■□□□□ 0.43
APP-202ENST00000348990 TCF3P15923 654 aa17.71■□□□□ 0.43
APP-202ENST00000348990 PSMB9P28065 219 aa17.71■□□□□ 0.43
APP-202ENST00000348990 POLR2JP52435 117 aaKnown RBP17.71■□□□□ 0.43
APP-202ENST00000348990 ZNF280AP59817 542 aaPredicted RBP17.71■□□□□ 0.43
APP-202ENST00000348990 ADARB1P78563 741 aaKnown RBP17.71■□□□□ 0.43
APP-202ENST00000348990 GRSF1Q12849 480 aaKnown RBP eCLIP17.71■□□□□ 0.43
APP-202ENST00000348990 ZBTB6Q15916 424 aa17.71■□□□□ 0.43
APP-202ENST00000348990 ANKRD34AQ69YU3 496 aa17.71■□□□□ 0.43
APP-202ENST00000348990 TWF2Q6IBS0 349 aaKnown RBP17.71■□□□□ 0.43
APP-202ENST00000348990 KIAA0408Q6ZU52 694 aa17.71■□□□□ 0.43
APP-202ENST00000348990 PSMA8Q8TAA3 256 aa17.71■□□□□ 0.43
APP-202ENST00000348990 NUDT8Q8WV74 236 aa17.71■□□□□ 0.43
APP-202ENST00000348990 PCED1BQ96HM7 432 aa17.71■□□□□ 0.43
APP-202ENST00000348990 CAMKK2Q96RR4 588 aa17.71■□□□□ 0.43
APP-202ENST00000348990 NOL6Q9H6R4 1146 aaKnown RBP17.71■□□□□ 0.43
APP-202ENST00000348990 PCDHGA11Q9Y5H2 935 aa17.71■□□□□ 0.43
APP-202ENST00000348990 PCDHA9Q9Y5H5 950 aa17.71■□□□□ 0.43
APP-202ENST00000348990 OAS3Q9Y6K5 1087 aaKnown RBP17.71■□□□□ 0.43
APP-202ENST00000348990 LSM1O15116 133 aaKnown RBP17.71■□□□□ 0.43
APP-202ENST00000348990 SEC14L2O76054 403 aa17.71■□□□□ 0.43
APP-202ENST00000348990 ZBTB7AO95365 584 aa17.71■□□□□ 0.43
APP-202ENST00000348990 CST1P01037 141 aa17.71■□□□□ 0.43
APP-202ENST00000348990 CLCQ05315 142 aa17.71■□□□□ 0.43
APP-202ENST00000348990 AQP6Q13520 282 aa17.71■□□□□ 0.43
APP-202ENST00000348990 KIAA2013Q8IYS2 634 aa17.71■□□□□ 0.43
APP-202ENST00000348990 TUBB1Q9H4B7 451 aa17.71■□□□□ 0.43
APP-202ENST00000348990 SDR39U1Q9NRG7 319 aaPredicted RBP17.71■□□□□ 0.43
APP-202ENST00000348990 ABCB10Q9NRK6 738 aa17.71■□□□□ 0.43
APP-202ENST00000348990 TREX1Q9NSU2 369 aa17.71■□□□□ 0.43
APP-202ENST00000348990 SERPINB1P30740 379 aa17.71■□□□□ 0.43
APP-202ENST00000348990 ALDH3A2P51648 485 aa17.71■□□□□ 0.43
APP-202ENST00000348990 FPGSQ05932 587 aa17.71■□□□□ 0.43
APP-202ENST00000348990 TMEM236Q5W0B7 351 aa17.71■□□□□ 0.43
APP-202ENST00000348990 TTC23Q5W5X9 447 aa17.71■□□□□ 0.43
APP-202ENST00000348990 CILP2Q8IUL8 1156 aa17.71■□□□□ 0.43
APP-202ENST00000348990 DACH2Q96NX9 599 aa17.71■□□□□ 0.43
APP-202ENST00000348990 NRCAMQ92823 1304 aa17.7■□□□□ 0.42
APP-202ENST00000348990 MATN3O15232 486 aa17.7■□□□□ 0.42
APP-202ENST00000348990 XPNPEP2O43895 674 aa17.7■□□□□ 0.42
APP-202ENST00000348990 UMPSP11172 480 aa17.7■□□□□ 0.42
APP-202ENST00000348990 HTR1BP28222 390 aa17.7■□□□□ 0.42
APP-202ENST00000348990 AIF1P55008 147 aa17.7■□□□□ 0.42
APP-202ENST00000348990 MTA1Q13330 715 aa17.7■□□□□ 0.42
APP-202ENST00000348990 OR4D1Q15615 310 aa17.7■□□□□ 0.42
APP-202ENST00000348990 MAPRE1Q15691 268 aaKnown RBP17.7■□□□□ 0.42
APP-202ENST00000348990 FAM126BQ8IXS8 530 aa17.7■□□□□ 0.42
APP-202ENST00000348990 UBXN10Q96LJ8 280 aa17.7■□□□□ 0.42
APP-202ENST00000348990 NODALQ96S42 347 aa17.7■□□□□ 0.42
APP-202ENST00000348990 SARS2Q9NP81 518 aaKnown RBP17.7■□□□□ 0.42
APP-202ENST00000348990 C8orf4Q9NR00 106 aa17.7■□□□□ 0.42
APP-202ENST00000348990 ITGB1BP2Q9UKP3 347 aa17.7■□□□□ 0.42
APP-202ENST00000348990 GIT1Q9Y2X7 761 aa17.7■□□□□ 0.42
APP-202ENST00000348990 SIP14410 1827 aa17.7■□□□□ 0.42
APP-202ENST00000348990 IQCA1LA6NCM1 817 aa17.7■□□□□ 0.42
APP-202ENST00000348990 RHOBTB1O94844 696 aa17.7■□□□□ 0.42
APP-202ENST00000348990 C7P10643 843 aa17.7■□□□□ 0.42
APP-202ENST00000348990 CRHBPP24387 322 aa17.7■□□□□ 0.42
APP-202ENST00000348990 ARHGAP1Q07960 439 aa17.7■□□□□ 0.42
APP-202ENST00000348990 ANKS6Q68DC2 871 aa17.7■□□□□ 0.42
APP-202ENST00000348990 DSG4Q86SJ6 1040 aa17.7■□□□□ 0.42
APP-202ENST00000348990 CDYL2Q8N8U2 506 aa17.7■□□□□ 0.42
APP-202ENST00000348990 SENP8Q96LD8 212 aa17.7■□□□□ 0.42
APP-202ENST00000348990 CRTAC1Q9NQ79 661 aa17.7■□□□□ 0.42
APP-202ENST00000348990 CNGB3Q9NQW8 809 aa17.7■□□□□ 0.42
APP-202ENST00000348990 GMIPQ9P107 970 aa17.7■□□□□ 0.42
APP-202ENST00000348990 THSD7AQ9UPZ6 1657 aa17.7■□□□□ 0.42
APP-202ENST00000348990 ENPP3O14638 875 aa17.7■□□□□ 0.42
APP-202ENST00000348990 SLC2A3P11169 496 aa17.7■□□□□ 0.42
APP-202ENST00000348990 PRDX3P30048 256 aaKnown RBP17.7■□□□□ 0.42
APP-202ENST00000348990 LEPRP48357 1165 aaKnown RBP17.7■□□□□ 0.42
APP-202ENST00000348990 SEPHS1P49903 392 aa17.7■□□□□ 0.42
APP-202ENST00000348990 NKX2-5P52952 324 aaPredicted RBP17.7■□□□□ 0.42
APP-202ENST00000348990 VBP1P61758 197 aa17.7■□□□□ 0.42
APP-202ENST00000348990 SKIV2LQ15477 1246 aaKnown RBP17.7■□□□□ 0.42
APP-202ENST00000348990 C6orf141Q5SZD1 244 aa17.7■□□□□ 0.42
APP-202ENST00000348990 CCDC80Q76M96 950 aa17.7■□□□□ 0.42
APP-202ENST00000348990 LEMD2Q8NC56 503 aa17.7■□□□□ 0.42
APP-202ENST00000348990 ITCHQ96J02 903 aa17.7■□□□□ 0.42
APP-202ENST00000348990 FCRL2Q96LA5 508 aaPredicted RBP17.7■□□□□ 0.42
APP-202ENST00000348990 AASSQ9UDR5 926 aa17.7■□□□□ 0.42
APP-202ENST00000348990 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.7■□□□□ 0.42
APP-202ENST00000348990 TMED5Q9Y3A6 229 aa17.7■□□□□ 0.42
APP-202ENST00000348990 H0YAE9 185 aa17.69■□□□□ 0.42
APP-202ENST00000348990 TSPAN3O60637 253 aa17.69■□□□□ 0.42
APP-202ENST00000348990 NDUFS2O75306 463 aa17.69■□□□□ 0.42
APP-202ENST00000348990 GLP2RO95838 553 aa17.69■□□□□ 0.42
APP-202ENST00000348990 ZNF24P17028 368 aa17.69■□□□□ 0.42
APP-202ENST00000348990 RCVRNP35243 200 aa17.69■□□□□ 0.42
APP-202ENST00000348990 RPL34P49207 117 aaKnown RBP17.69■□□□□ 0.42
APP-202ENST00000348990 DGKQP52824 942 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms