RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 LSSP48449 732 aa27.34■■□□□ 1.97
ATPAF1-201ENST00000329231 RANBP10Q6VN20 620 aa27.34■■□□□ 1.97
ATPAF1-201ENST00000329231 ZNF662Q6ZS27 426 aa27.34■■□□□ 1.97
ATPAF1-201ENST00000329231 CHST15Q7LFX5 561 aaPredicted RBP27.34■■□□□ 1.97
ATPAF1-201ENST00000329231 SPRED1Q7Z699 444 aa27.34■■□□□ 1.97
ATPAF1-201ENST00000329231 LSMEM2Q8N112 164 aa27.34■■□□□ 1.97
ATPAF1-201ENST00000329231 NAGSQ8N159 534 aa27.34■■□□□ 1.97
ATPAF1-201ENST00000329231 ARL14Q8N4G2 192 aa27.34■■□□□ 1.97
ATPAF1-201ENST00000329231 LRRC45Q96CN5 670 aa27.34■■□□□ 1.97
ATPAF1-201ENST00000329231 ATXN7L3BQ96GX2 97 aa27.34■■□□□ 1.97
ATPAF1-201ENST00000329231 OR2AG1Q9H205 316 aa27.34■■□□□ 1.97
ATPAF1-201ENST00000329231 POLR1BQ9H9Y6 1135 aa27.34■■□□□ 1.97
ATPAF1-201ENST00000329231 IL17CQ9P0M4 197 aa27.34■■□□□ 1.97
ATPAF1-201ENST00000329231 PKP3Q9Y446 797 aa27.34■■□□□ 1.97
ATPAF1-201ENST00000329231 A0A1W2PQM1 296 aa27.33■■□□□ 1.97
ATPAF1-201ENST00000329231 D6RAR5 112 aa27.33■■□□□ 1.97
ATPAF1-201ENST00000329231 GRID2O43424 1007 aa27.33■■□□□ 1.97
ATPAF1-201ENST00000329231 PPFIA2O75334 1257 aa27.33■■□□□ 1.97
ATPAF1-201ENST00000329231 MPOP05164 745 aa27.33■■□□□ 1.97
ATPAF1-201ENST00000329231 ZNF8P17098 575 aaPredicted RBP27.33■■□□□ 1.97
ATPAF1-201ENST00000329231 ADRA1AP35348 466 aa27.33■■□□□ 1.97
ATPAF1-201ENST00000329231 ACTN2P35609 894 aa27.33■■□□□ 1.97
ATPAF1-201ENST00000329231 GABREP78334 506 aa27.33■■□□□ 1.97
ATPAF1-201ENST00000329231 ARHGEF18Q6ZSZ5 1173 aa27.33■■□□□ 1.97
ATPAF1-201ENST00000329231 FAM71DQ8N9W8 422 aa27.33■■□□□ 1.97
ATPAF1-201ENST00000329231 DTX3LQ8TDB6 740 aa27.33■■□□□ 1.97
ATPAF1-201ENST00000329231 ALS2CR12Q96Q35 445 aa27.33■■□□□ 1.97
ATPAF1-201ENST00000329231 VPS35Q96QK1 796 aa27.33■■□□□ 1.97
ATPAF1-201ENST00000329231 ARFGAP3Q9NP61 516 aa27.33■■□□□ 1.97
ATPAF1-201ENST00000329231 R3HDM2Q9Y2K5 976 aaKnown RBP27.33■■□□□ 1.97
ATPAF1-201ENST00000329231 PCYT1BQ9Y5K3 369 aaPredicted RBP27.33■■□□□ 1.97
ATPAF1-201ENST00000329231 DMXL2Q8TDJ6 3036 aa27.33■■□□□ 1.96
ATPAF1-201ENST00000329231 TMX2-CTNND1H3BSU7 103 aa27.32■■□□□ 1.96
ATPAF1-201ENST00000329231 SPAM1P38567 509 aa27.32■■□□□ 1.96
ATPAF1-201ENST00000329231 ZNF438Q7Z4V0 828 aa27.32■■□□□ 1.96
ATPAF1-201ENST00000329231 ADGRG6Q86SQ4 1221 aa27.32■■□□□ 1.96
ATPAF1-201ENST00000329231 SLC35B2Q8TB61 432 aa27.32■■□□□ 1.96
ATPAF1-201ENST00000329231 PATE1Q8WXA2 126 aa27.32■■□□□ 1.96
ATPAF1-201ENST00000329231 IL26Q9NPH9 171 aa27.32■■□□□ 1.96
ATPAF1-201ENST00000329231 LZTFL1Q9NQ48 299 aa27.32■■□□□ 1.96
ATPAF1-201ENST00000329231 TCRBV7S2A1N4TA0A589 114 aa27.31■■□□□ 1.96
ATPAF1-201ENST00000329231 VEGFDO43915 354 aa27.31■■□□□ 1.96
ATPAF1-201ENST00000329231 ACP5P13686 325 aa27.31■■□□□ 1.96
ATPAF1-201ENST00000329231 PDX1P52945 283 aa27.31■■□□□ 1.96
ATPAF1-201ENST00000329231 RPS6KA1Q15418 735 aa27.31■■□□□ 1.96
ATPAF1-201ENST00000329231 PARP6Q2NL67 630 aa27.31■■□□□ 1.96
ATPAF1-201ENST00000329231 ATP13A5Q4VNC0 1218 aa27.31■■□□□ 1.96
ATPAF1-201ENST00000329231 ZNF648Q5T619 568 aaPredicted RBP27.31■■□□□ 1.96
ATPAF1-201ENST00000329231 APOL2Q9BQE5 337 aa27.31■■□□□ 1.96
ATPAF1-201ENST00000329231 SATB2Q9UPW6 733 aa27.31■■□□□ 1.96
ATPAF1-201ENST00000329231 COL27A1Q8IZC6 1860 aaPredicted RBP27.3■■□□□ 1.96
ATPAF1-201ENST00000329231 C2orf81A6NN90 581 aa27.3■■□□□ 1.96
ATPAF1-201ENST00000329231 STX7O15400 261 aaKnown RBP27.3■■□□□ 1.96
ATPAF1-201ENST00000329231 DXOO77932 396 aaKnown RBP27.3■■□□□ 1.96
ATPAF1-201ENST00000329231 GPR3P46089 330 aa27.3■■□□□ 1.96
ATPAF1-201ENST00000329231 B4GALNT1Q00973 533 aa27.3■■□□□ 1.96
ATPAF1-201ENST00000329231 NR1D2Q14995 579 aa27.3■■□□□ 1.96
ATPAF1-201ENST00000329231 TAF1AQ15573 450 aaPredicted RBP27.3■■□□□ 1.96
ATPAF1-201ENST00000329231 TBC1D25Q3MII6 688 aa27.3■■□□□ 1.96
ATPAF1-201ENST00000329231 C3orf38Q5JPI3 329 aa27.3■■□□□ 1.96
ATPAF1-201ENST00000329231 MEI1Q5TIA1 1274 aa27.3■■□□□ 1.96
ATPAF1-201ENST00000329231 FGF11Q92914 225 aa27.3■■□□□ 1.96
ATPAF1-201ENST00000329231 TMEM74Q96NL1 305 aa27.3■■□□□ 1.96
ATPAF1-201ENST00000329231 TBL1YQ9BQ87 522 aa27.3■■□□□ 1.96
ATPAF1-201ENST00000329231 TMEM121Q9BTD3 319 aa27.3■■□□□ 1.96
ATPAF1-201ENST00000329231 FRMD8P1Q9BZ68 369 aaPredicted RBP27.3■■□□□ 1.96
ATPAF1-201ENST00000329231 STRADBQ9C0K7 418 aa27.3■■□□□ 1.96
ATPAF1-201ENST00000329231 KCNK6Q9Y257 313 aa27.3■■□□□ 1.96
ATPAF1-201ENST00000329231 GLYATL1P3A0A0U1RQE8 302 aa27.29■■□□□ 1.96
ATPAF1-201ENST00000329231 CHUKO15111 745 aa27.29■■□□□ 1.96
ATPAF1-201ENST00000329231 LPOP22079 712 aaPredicted RBP27.29■■□□□ 1.96
ATPAF1-201ENST00000329231 ALDH4A1P30038 563 aa27.29■■□□□ 1.96
ATPAF1-201ENST00000329231 INHBCP55103 352 aa27.29■■□□□ 1.96
ATPAF1-201ENST00000329231 P3H1Q32P28 736 aa27.29■■□□□ 1.96
ATPAF1-201ENST00000329231 FAM151BQ6UXP7 276 aa27.29■■□□□ 1.96
ATPAF1-201ENST00000329231 KLHDC8BQ8IXV7 354 aa27.29■■□□□ 1.96
ATPAF1-201ENST00000329231 WDR36Q8NI36 951 aaKnown RBP27.29■■□□□ 1.96
ATPAF1-201ENST00000329231 SNIP1Q8TAD8 396 aaKnown RBP27.29■■□□□ 1.96
ATPAF1-201ENST00000329231 GDAP1Q8TB36 358 aa27.29■■□□□ 1.96
ATPAF1-201ENST00000329231 BRSK1Q8TDC3 778 aa27.29■■□□□ 1.96
ATPAF1-201ENST00000329231 LIN37Q96GY3 246 aaPredicted RBP27.29■■□□□ 1.96
ATPAF1-201ENST00000329231 ZNF578Q96N58 590 aaPredicted RBP27.29■■□□□ 1.96
ATPAF1-201ENST00000329231 FEZ2Q9UHY8 353 aaPredicted RBP27.29■■□□□ 1.96
ATPAF1-201ENST00000329231 PCDHGA8Q9Y5G5 932 aa27.29■■□□□ 1.96
ATPAF1-201ENST00000329231 ARL5AQ9Y689 179 aa27.29■■□□□ 1.96
ATPAF1-201ENST00000329231 URB1O60287 2271 aaKnown RBP27.29■■□□□ 1.96
ATPAF1-201ENST00000329231 CCDC187A0A096LP49 1063 aa27.28■■□□□ 1.96
ATPAF1-201ENST00000329231 B4GAT1O43505 415 aa27.28■■□□□ 1.96
ATPAF1-201ENST00000329231 BUD23O43709 281 aaKnown RBP27.28■■□□□ 1.96
ATPAF1-201ENST00000329231 TLX3O43711 291 aaPredicted RBP27.28■■□□□ 1.96
ATPAF1-201ENST00000329231 CDK14O94921 469 aa27.28■■□□□ 1.96
ATPAF1-201ENST00000329231 SLC2A4P14672 509 aa27.28■■□□□ 1.96
ATPAF1-201ENST00000329231 CLCNKAP51800 687 aa27.28■■□□□ 1.96
ATPAF1-201ENST00000329231 OR1D5P58170 312 aa27.28■■□□□ 1.96
ATPAF1-201ENST00000329231 OLIG2Q13516 323 aa27.28■■□□□ 1.96
ATPAF1-201ENST00000329231 ITGA9Q13797 1035 aa27.28■■□□□ 1.96
ATPAF1-201ENST00000329231 CHRNA6Q15825 494 aa27.28■■□□□ 1.96
ATPAF1-201ENST00000329231 B3GNT8Q7Z7M8 397 aa27.28■■□□□ 1.96
ATPAF1-201ENST00000329231 LRRTM4Q86VH4 590 aa27.28■■□□□ 1.96
ATPAF1-201ENST00000329231 SLC13A5Q86YT5 568 aaPredicted RBP27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms