RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 CCDC162PA2VCL2 907 aa17.04■□□□□ 0.32
SLC1A4-201ENST00000234256 DUSP11O75319 330 aaKnown RBP17.04■□□□□ 0.32
SLC1A4-201ENST00000234256 NADKO95544 446 aaPredicted RBP17.04■□□□□ 0.32
SLC1A4-201ENST00000234256 COL6A1P12109 1028 aa17.04■□□□□ 0.32
SLC1A4-201ENST00000234256 MTHFRP42898 656 aa17.04■□□□□ 0.32
SLC1A4-201ENST00000234256 CAPZA2P47755 286 aa17.04■□□□□ 0.32
SLC1A4-201ENST00000234256 ENPEPQ07075 957 aa17.04■□□□□ 0.32
SLC1A4-201ENST00000234256 RGS21Q2M5E4 152 aa17.04■□□□□ 0.32
SLC1A4-201ENST00000234256 LRRC73Q5JTD7 316 aa17.04■□□□□ 0.32
SLC1A4-201ENST00000234256 REPS1Q96D71 796 aa17.04■□□□□ 0.32
SLC1A4-201ENST00000234256 ATAD3AQ9NVI7 634 aa17.04■□□□□ 0.32
SLC1A4-201ENST00000234256 FCF1Q9Y324 198 aaKnown RBP17.04■□□□□ 0.32
SLC1A4-201ENST00000234256 MRPS23Q9Y3D9 190 aaKnown RBP17.04■□□□□ 0.32
SLC1A4-201ENST00000234256 ZFP37Q9Y6Q3 630 aaPredicted RBP17.04■□□□□ 0.32
SLC1A4-201ENST00000234256 PNMA8CA0A1B0GUJ8 204 aa17.04■□□□□ 0.32
SLC1A4-201ENST00000234256 FAM159BA6NKW6 160 aa17.04■□□□□ 0.32
SLC1A4-201ENST00000234256 OR2AG2A6NM03 316 aa17.04■□□□□ 0.32
SLC1A4-201ENST00000234256 IRAK2O43187 625 aa17.04■□□□□ 0.32
SLC1A4-201ENST00000234256 POU5F1Q01860 360 aaKnown RBP17.04■□□□□ 0.32
SLC1A4-201ENST00000234256 RAB6CQ53S08 254 aa17.04■□□□□ 0.32
SLC1A4-201ENST00000234256 PAQR3Q6TCH7 311 aa17.04■□□□□ 0.32
SLC1A4-201ENST00000234256 POC5Q8NA72 575 aa17.04■□□□□ 0.32
SLC1A4-201ENST00000234256 ATL1Q8WXF7 558 aa17.04■□□□□ 0.32
SLC1A4-201ENST00000234256 UPF1Q92900 1129 aaKnown RBP eCLIP17.04■□□□□ 0.325e-7■■■■□ 23.3
SLC1A4-201ENST00000234256 AARSD1Q9BTE6 412 aaKnown RBP17.04■□□□□ 0.32
SLC1A4-201ENST00000234256 RAB6CQ9H0N0 254 aa17.04■□□□□ 0.32
SLC1A4-201ENST00000234256 XYLT2Q9H1B5 865 aa17.04■□□□□ 0.32
SLC1A4-201ENST00000234256 GKN1Q9NS71 199 aa17.04■□□□□ 0.32
SLC1A4-201ENST00000234256 TOR4AQ9NXH8 423 aa17.04■□□□□ 0.32
SLC1A4-201ENST00000234256 DGKBQ9Y6T7 804 aa17.04■□□□□ 0.32
SLC1A4-201ENST00000234256 ACSL4O60488 711 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 EIF2S1P05198 315 aaKnown RBP17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 HLA-DQB2P05538 268 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 WARSP23381 471 aaKnown RBP17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 NAE1Q13564 534 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 ATXN7L2Q5T6C5 722 aaPredicted RBP17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 OR10A6Q8NH74 314 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 TUBGCP5Q96RT8 1024 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 EHD3Q9NZN3 535 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 KPNA5O15131 536 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 RGS20O76081 388 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 CDK14O94921 469 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 TSPAN19P0C672 248 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 CCR10P46092 362 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 PLEKHG4Q58EX7 1191 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 TMEM63BQ5T3F8 832 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 ZNF57Q68EA5 555 aaPredicted RBP17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 PTCD2Q8WV60 388 aaKnown RBP17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 BCO2Q9BYV7 579 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 GLYATL1P3A0A0U1RQE8 302 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 TRMUO75648 421 aaKnown RBP17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 KIR3DL1P43629 444 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 MTPNP58546 118 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 PRSS55Q6UWB4 352 aaPredicted RBP17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 AMER2Q8N7J2 671 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 SIDT2Q8NBJ9 832 aaKnown RBP17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 GMLQ99445 158 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 GTF2IRD1Q9UHL9 959 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 CD84Q9UIB8 345 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 SLC7A4O43246 635 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 DLX3O60479 287 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 MAPK9P45984 424 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 RPIAP49247 311 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 GLUD2P49448 558 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 MADCAM1Q13477 382 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 KRR1Q13601 381 aaKnown RBP17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 RBM20Q5T481 1227 aaKnown RBP17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 EIF3MQ7L2H7 374 aaKnown RBP17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 FGD2Q7Z6J4 655 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 OSTM1Q86WC4 334 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 CDK20Q8IZL9 346 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 ZDHHC14Q8IZN3 488 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 WDTC1Q8N5D0 677 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 IRGQQ8WZA9 623 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 CDK15Q96Q40 435 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 PRRG3Q9BZD7 231 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 MAGEL2Q9UJ55 1249 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 FBXO10Q9UK96 956 aa17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 MRPS7Q9Y2R9 242 aaKnown RBP17.03■□□□□ 0.32
SLC1A4-201ENST00000234256 CYP3A5P20815 502 aa17.02■□□□□ 0.32
SLC1A4-201ENST00000234256 SLC9A4Q6AI14 798 aa17.02■□□□□ 0.32
SLC1A4-201ENST00000234256 FUT10Q6P4F1 479 aa17.02■□□□□ 0.32
SLC1A4-201ENST00000234256 KRT73Q86Y46 540 aa17.02■□□□□ 0.32
SLC1A4-201ENST00000234256 C7orf43Q8WVR3 580 aa17.02■□□□□ 0.32
SLC1A4-201ENST00000234256 DEFB118Q96PH6 123 aa17.02■□□□□ 0.32
SLC1A4-201ENST00000234256 PCYT2Q99447 389 aa17.02■□□□□ 0.32
SLC1A4-201ENST00000234256 ADAM7Q9H2U9 754 aa17.02■□□□□ 0.32
SLC1A4-201ENST00000234256 ZDHHC2Q9UIJ5 367 aa17.02■□□□□ 0.32
SLC1A4-201ENST00000234256 NEDD8-MDP1E9PL57 170 aa17.02■□□□□ 0.32
SLC1A4-201ENST00000234256 PDLIM1O00151 329 aa17.02■□□□□ 0.32
SLC1A4-201ENST00000234256 OR10H3O60404 316 aa17.02■□□□□ 0.32
SLC1A4-201ENST00000234256 NIPSNAP2O75323 286 aa17.02■□□□□ 0.32
SLC1A4-201ENST00000234256 NR2F1P10589 423 aa17.02■□□□□ 0.32
SLC1A4-201ENST00000234256 CES1P23141 567 aa17.02■□□□□ 0.32
SLC1A4-201ENST00000234256 TRIQKQ629K1 86 aa17.02■□□□□ 0.32
SLC1A4-201ENST00000234256 KIAA0930Q6ICG6 404 aaPredicted RBP17.02■□□□□ 0.32
SLC1A4-201ENST00000234256 TREML1Q86YW5 311 aa17.02■□□□□ 0.32
SLC1A4-201ENST00000234256 CANT1Q8WVQ1 401 aa17.02■□□□□ 0.32
SLC1A4-201ENST00000234256 ITCHQ96J02 903 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms