RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 POLR1BQ9H9Y6 1135 aa20.48■□□□□ 0.87
HIF1A-206ENST00000553999 RDH14Q9HBH5 336 aa20.48■□□□□ 0.87
HIF1A-206ENST00000553999 TRNAU1APQ9NX07 287 aaKnown RBP20.48■□□□□ 0.87
HIF1A-206ENST00000553999 FAM153AQ9UHL3 310 aa20.48■□□□□ 0.87
HIF1A-206ENST00000553999 CNOT6Q9ULM6 557 aaKnown RBP20.48■□□□□ 0.87
HIF1A-206ENST00000553999 PCDHA3Q9Y5H8 950 aa20.48■□□□□ 0.87
HIF1A-206ENST00000553999 PKD1L2Q7Z442 2459 aa20.48■□□□□ 0.87
HIF1A-206ENST00000553999 KNTC1P50748 2209 aa20.47■□□□□ 0.87
HIF1A-206ENST00000553999 RHPN2P1A8MT19 583 aa20.47■□□□□ 0.87
HIF1A-206ENST00000553999 APOC4-APOC2K7ER74 178 aa20.47■□□□□ 0.87
HIF1A-206ENST00000553999 NTN3O00634 580 aaPredicted RBP20.47■□□□□ 0.87
HIF1A-206ENST00000553999 PJA2O43164 708 aa20.47■□□□□ 0.87
HIF1A-206ENST00000553999 SNX2O60749 519 aa20.47■□□□□ 0.87
HIF1A-206ENST00000553999 APOC2P02655 101 aa20.47■□□□□ 0.87
HIF1A-206ENST00000553999 PTMAP06454 111 aaKnown RBP20.47■□□□□ 0.87
HIF1A-206ENST00000553999 PYGMP11217 842 aa20.47■□□□□ 0.87
HIF1A-206ENST00000553999 GLB1P16278 677 aa20.47■□□□□ 0.87
HIF1A-206ENST00000553999 ACTN2P35609 894 aa20.47■□□□□ 0.87
HIF1A-206ENST00000553999 ABCG1P45844 678 aa20.47■□□□□ 0.87
HIF1A-206ENST00000553999 RWDD2BP57060 319 aa20.47■□□□□ 0.87
HIF1A-206ENST00000553999 OR1D5P58170 312 aa20.47■□□□□ 0.87
HIF1A-206ENST00000553999 MAP9Q49MG5 647 aa20.47■□□□□ 0.87
HIF1A-206ENST00000553999 ZNF569Q5MCW4 686 aa20.47■□□□□ 0.87
HIF1A-206ENST00000553999 OGFOD3Q6PK18 319 aa20.47■□□□□ 0.87
HIF1A-206ENST00000553999 PEX26Q7Z412 305 aa20.47■□□□□ 0.87
HIF1A-206ENST00000553999 SPRED1Q7Z699 444 aa20.47■□□□□ 0.87
HIF1A-206ENST00000553999 LRRC57Q8N9N7 239 aa20.47■□□□□ 0.87
HIF1A-206ENST00000553999 BLOC1S5Q8TDH9 187 aa20.47■□□□□ 0.87
HIF1A-206ENST00000553999 TADA1Q96BN2 335 aa20.47■□□□□ 0.87
HIF1A-206ENST00000553999 COX14Q96I36 57 aa20.47■□□□□ 0.87
HIF1A-206ENST00000553999 APOL2Q9BQE5 337 aa20.47■□□□□ 0.87
HIF1A-206ENST00000553999 ZZEF1O43149 2961 aa20.47■□□□□ 0.87
HIF1A-206ENST00000553999 DMXL2Q8TDJ6 3036 aa20.47■□□□□ 0.87
HIF1A-206ENST00000553999 GPR39O43194 453 aa20.46■□□□□ 0.87
HIF1A-206ENST00000553999 TCEA3O75764 348 aa20.46■□□□□ 0.87
HIF1A-206ENST00000553999 EML2O95834 649 aa20.46■□□□□ 0.87
HIF1A-206ENST00000553999 BPIP17213 487 aa20.46■□□□□ 0.87
HIF1A-206ENST00000553999 TNNT3P45378 269 aaPredicted RBP20.46■□□□□ 0.87
HIF1A-206ENST00000553999 EIF3EP60228 445 aaKnown RBP20.46■□□□□ 0.87
HIF1A-206ENST00000553999 SIRPB2Q5JXA9 342 aa20.46■□□□□ 0.87
HIF1A-206ENST00000553999 NKAIN2Q5VXU1 208 aa20.46■□□□□ 0.87
HIF1A-206ENST00000553999 LRRC69Q6ZNQ3 347 aa20.46■□□□□ 0.87
HIF1A-206ENST00000553999 USP53Q70EK8 1073 aa20.46■□□□□ 0.87
HIF1A-206ENST00000553999 TMPRSS9Q7Z410 1059 aa20.46■□□□□ 0.87
HIF1A-206ENST00000553999 NAGSQ8N159 534 aa20.46■□□□□ 0.87
HIF1A-206ENST00000553999 ARL14Q8N4G2 192 aa20.46■□□□□ 0.87
HIF1A-206ENST00000553999 FGF11Q92914 225 aa20.46■□□□□ 0.87
HIF1A-206ENST00000553999 MRGPRX2Q96LB1 330 aa20.46■□□□□ 0.87
HIF1A-206ENST00000553999 FICDQ9BVA6 458 aa20.46■□□□□ 0.87
HIF1A-206ENST00000553999 FSD1LQ9BXM9 530 aa20.46■□□□□ 0.87
HIF1A-206ENST00000553999 OR2AG1Q9H205 316 aa20.46■□□□□ 0.87
HIF1A-206ENST00000553999 AMFRQ9UKV5 643 aa20.46■□□□□ 0.87
HIF1A-206ENST00000553999 ACACAQ13085 2346 aa20.45■□□□□ 0.87
HIF1A-206ENST00000553999 CCDC66A2RUB6 948 aa20.45■□□□□ 0.86
HIF1A-206ENST00000553999 KCNN4O15554 427 aa20.45■□□□□ 0.86
HIF1A-206ENST00000553999 MTSS1O43312 755 aa20.45■□□□□ 0.86
HIF1A-206ENST00000553999 DNAJC6O75061 913 aa20.45■□□□□ 0.86
HIF1A-206ENST00000553999 TNFSF15O95150 251 aa20.45■□□□□ 0.86
HIF1A-206ENST00000553999 SLC25A14O95258 325 aaPredicted RBP20.45■□□□□ 0.86
HIF1A-206ENST00000553999 PYGLP06737 847 aa20.45■□□□□ 0.86
HIF1A-206ENST00000553999 RBMS1P29558 406 aaKnown RBP20.45■□□□□ 0.86
HIF1A-206ENST00000553999 CDC25BP30305 580 aa20.45■□□□□ 0.86
HIF1A-206ENST00000553999 LSSP48449 732 aa20.45■□□□□ 0.86
HIF1A-206ENST00000553999 INHBCP55103 352 aa20.45■□□□□ 0.86
HIF1A-206ENST00000553999 KIF5AQ12840 1032 aa20.45■□□□□ 0.86
HIF1A-206ENST00000553999 PHF19Q5T6S3 580 aa20.45■□□□□ 0.86
HIF1A-206ENST00000553999 DARS2Q6PI48 645 aaKnown RBP20.45■□□□□ 0.86
HIF1A-206ENST00000553999 TMC3Q7Z5M5 1100 aa20.45■□□□□ 0.86
HIF1A-206ENST00000553999 PDZD3Q86UT5 571 aa20.45■□□□□ 0.86
HIF1A-206ENST00000553999 CDKL3Q8IVW4 592 aaPredicted RBP20.45■□□□□ 0.86
HIF1A-206ENST00000553999 TAB3Q8N5C8 712 aaPredicted RBP20.45■□□□□ 0.86
HIF1A-206ENST00000553999 OSGEPL1Q9H4B0 414 aa20.45■□□□□ 0.86
HIF1A-206ENST00000553999 MAGEE1Q9HCI5 957 aa20.45■□□□□ 0.86
HIF1A-206ENST00000553999 ATXN10Q9UBB4 475 aa20.45■□□□□ 0.86
HIF1A-206ENST00000553999 CAPN6Q9Y6Q1 641 aa20.45■□□□□ 0.86
HIF1A-206ENST00000553999 ADAMTS20P59510 1910 aa20.45■□□□□ 0.86
HIF1A-206ENST00000553999 BTNL10A8MVZ5 291 aa20.44■□□□□ 0.86
HIF1A-206ENST00000553999 HACD1B0YJ81 288 aa20.44■□□□□ 0.86
HIF1A-206ENST00000553999 RRP8O43159 456 aaKnown RBP20.44■□□□□ 0.86
HIF1A-206ENST00000553999 AGTP01019 485 aa20.44■□□□□ 0.86
HIF1A-206ENST00000553999 RBP3P10745 1247 aa20.44■□□□□ 0.86
HIF1A-206ENST00000553999 ZNF8P17098 575 aaPredicted RBP20.44■□□□□ 0.86
HIF1A-206ENST00000553999 MPSTP25325 297 aa20.44■□□□□ 0.86
HIF1A-206ENST00000553999 PSMB4P28070 264 aa20.44■□□□□ 0.86
HIF1A-206ENST00000553999 PTPRCAPQ14761 206 aa20.44■□□□□ 0.86
HIF1A-206ENST00000553999 JAMLQ86YT9 394 aa20.44■□□□□ 0.86
HIF1A-206ENST00000553999 OR6C4Q8NGE1 309 aa20.44■□□□□ 0.86
HIF1A-206ENST00000553999 GDAP1Q8TB36 358 aa20.44■□□□□ 0.86
HIF1A-206ENST00000553999 CCDC110Q8TBZ0 833 aa20.44■□□□□ 0.86
HIF1A-206ENST00000553999 FCRL5Q96RD9 977 aa20.44■□□□□ 0.86
HIF1A-206ENST00000553999 NUDT22Q9BRQ3 303 aa20.44■□□□□ 0.86
HIF1A-206ENST00000553999 GBA3Q9H227 469 aa20.44■□□□□ 0.86
HIF1A-206ENST00000553999 ASCL3Q9NQ33 180 aa20.44■□□□□ 0.86
HIF1A-206ENST00000553999 PISDQ9UG56 409 aa20.44■□□□□ 0.86
HIF1A-206ENST00000553999 URB1O60287 2271 aaKnown RBP20.43■□□□□ 0.86
HIF1A-206ENST00000553999 A0A087WV48 116 aa20.43■□□□□ 0.86
HIF1A-206ENST00000553999 CCDC187A0A096LP49 1063 aa20.43■□□□□ 0.86
HIF1A-206ENST00000553999 B4GAT1O43505 415 aa20.43■□□□□ 0.86
HIF1A-206ENST00000553999 MAPK9P45984 424 aa20.43■□□□□ 0.86
HIF1A-206ENST00000553999 PCBP4P57723 403 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms