RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 SPAM1P38567 509 aa11.73□□□□□ -0.53
RAB5C-204ENST00000547517 ADCY8P40145 1251 aa11.73□□□□□ -0.53
RAB5C-204ENST00000547517 OASLQ15646 514 aaKnown RBP11.73□□□□□ -0.53
RAB5C-204ENST00000547517 PARP6Q2NL67 630 aa11.73□□□□□ -0.53
RAB5C-204ENST00000547517 P3H1Q32P28 736 aa11.73□□□□□ -0.53
RAB5C-204ENST00000547517 PERM1Q5SV97 790 aa11.73□□□□□ -0.53
RAB5C-204ENST00000547517 ZNF648Q5T619 568 aaPredicted RBP11.73□□□□□ -0.53
RAB5C-204ENST00000547517 FRYQ5TBA9 3013 aa11.73□□□□□ -0.53
RAB5C-204ENST00000547517 SLC30A9Q6PML9 568 aa11.73□□□□□ -0.53
RAB5C-204ENST00000547517 CCNI2Q6ZMN8 369 aaPredicted RBP11.73□□□□□ -0.53
RAB5C-204ENST00000547517 TMPRSS12Q86WS5 348 aa11.73□□□□□ -0.53
RAB5C-204ENST00000547517 PHYKPLQ8IUZ5 450 aa11.73□□□□□ -0.53
RAB5C-204ENST00000547517 SFTPA2Q8IWL1 248 aa11.73□□□□□ -0.53
RAB5C-204ENST00000547517 MAPK15Q8TD08 544 aa11.73□□□□□ -0.53
RAB5C-204ENST00000547517 NAT6Q93015 286 aa11.73□□□□□ -0.53
RAB5C-204ENST00000547517 LRRC45Q96CN5 670 aa11.73□□□□□ -0.53
RAB5C-204ENST00000547517 PLEKHG4BQ96PX9 1271 aa11.73□□□□□ -0.53
RAB5C-204ENST00000547517 FRMD8P1Q9BZ68 369 aaPredicted RBP11.73□□□□□ -0.53
RAB5C-204ENST00000547517 DPEP2Q9H4A9 486 aa11.73□□□□□ -0.53
RAB5C-204ENST00000547517 SYNDIG1Q9H7V2 258 aa11.73□□□□□ -0.53
RAB5C-204ENST00000547517 TRNAU1APQ9NX07 287 aaKnown RBP11.73□□□□□ -0.53
RAB5C-204ENST00000547517 VPS18Q9P253 973 aa11.73□□□□□ -0.53
RAB5C-204ENST00000547517 PADI4Q9UM07 663 aa11.73□□□□□ -0.53
RAB5C-204ENST00000547517 ZNF148Q9UQR1 794 aa11.73□□□□□ -0.53
RAB5C-204ENST00000547517 PKP3Q9Y446 797 aa11.73□□□□□ -0.53
RAB5C-204ENST00000547517 PRKAB1Q9Y478 270 aa11.73□□□□□ -0.53
RAB5C-204ENST00000547517 PCYT1BQ9Y5K3 369 aaPredicted RBP11.73□□□□□ -0.53
RAB5C-204ENST00000547517 ARL5AQ9Y689 179 aa11.73□□□□□ -0.53
RAB5C-204ENST00000547517 ASPMQ8IZT6 3477 aa11.72□□□□□ -0.53
RAB5C-204ENST00000547517 CEP295Q9C0D2 2601 aa11.72□□□□□ -0.53
RAB5C-204ENST00000547517 EME2A4GXA9 379 aaPredicted RBP11.72□□□□□ -0.53
RAB5C-204ENST00000547517 FAM221BA6H8Z2 402 aa11.72□□□□□ -0.53
RAB5C-204ENST00000547517 GPR39O43194 453 aa11.72□□□□□ -0.53
RAB5C-204ENST00000547517 OPA1O60313 960 aa11.72□□□□□ -0.53
RAB5C-204ENST00000547517 SLC25A14O95258 325 aaPredicted RBP11.72□□□□□ -0.53
RAB5C-204ENST00000547517 ACTR1BP42025 376 aa11.72□□□□□ -0.53
RAB5C-204ENST00000547517 ACTR1AP61163 376 aa11.72□□□□□ -0.53
RAB5C-204ENST00000547517 E2F1Q01094 437 aa11.72□□□□□ -0.53
RAB5C-204ENST00000547517 CTBSQ01459 385 aa11.72□□□□□ -0.53
RAB5C-204ENST00000547517 PTPRCAPQ14761 206 aa11.72□□□□□ -0.53
RAB5C-204ENST00000547517 SIX1Q15475 284 aaPredicted RBP11.72□□□□□ -0.53
RAB5C-204ENST00000547517 LONRF2Q1L5Z9 754 aa11.72□□□□□ -0.53
RAB5C-204ENST00000547517 PYCR3Q53H96 274 aa11.72□□□□□ -0.53
RAB5C-204ENST00000547517 PDPK2PQ6A1A2 396 aa11.72□□□□□ -0.53
RAB5C-204ENST00000547517 FAM151BQ6UXP7 276 aa11.72□□□□□ -0.53
RAB5C-204ENST00000547517 RANBP10Q6VN20 620 aa11.72□□□□□ -0.53
RAB5C-204ENST00000547517 PRUNE1Q86TP1 453 aa11.72□□□□□ -0.53
RAB5C-204ENST00000547517 NRROSQ86YC3 692 aa11.72□□□□□ -0.53
RAB5C-204ENST00000547517 GPBAR1Q8TDU6 330 aa11.72□□□□□ -0.53
RAB5C-204ENST00000547517 GLYATL1Q969I3 302 aa11.72□□□□□ -0.53
RAB5C-204ENST00000547517 CCDC74AQ96AQ1 378 aa11.72□□□□□ -0.53
RAB5C-204ENST00000547517 RTP4Q96DX8 246 aa11.72□□□□□ -0.53
RAB5C-204ENST00000547517 SCARF2Q96GP6 870 aaPredicted RBP11.72□□□□□ -0.53
RAB5C-204ENST00000547517 PDLIM2Q96JY6 352 aa11.72□□□□□ -0.53
RAB5C-204ENST00000547517 ABCG4Q9H172 646 aa11.72□□□□□ -0.53
RAB5C-204ENST00000547517 SPATS2LQ9NUQ6 558 aaKnown RBP11.72□□□□□ -0.53
RAB5C-204ENST00000547517 TRMT1Q9NXH9 659 aaKnown RBP11.72□□□□□ -0.53
RAB5C-204ENST00000547517 IL17CQ9P0M4 197 aa11.72□□□□□ -0.53
RAB5C-204ENST00000547517 TAAR2Q9P1P5 351 aa11.72□□□□□ -0.53
RAB5C-204ENST00000547517 ZNHIT2Q9UHR6 403 aa11.72□□□□□ -0.53
RAB5C-204ENST00000547517 CLCA2Q9UQC9 943 aa11.72□□□□□ -0.53
RAB5C-204ENST00000547517 PLEKHM1Q9Y4G2 1056 aa11.72□□□□□ -0.53
RAB5C-204ENST00000547517 ST14Q9Y5Y6 855 aa11.72□□□□□ -0.53
RAB5C-204ENST00000547517 EPG5Q9HCE0 2579 aa11.72□□□□□ -0.53
RAB5C-204ENST00000547517 PLXNB3Q9ULL4 1909 aa11.71□□□□□ -0.53
RAB5C-204ENST00000547517 GLYATL1P3A0A0U1RQE8 302 aa11.71□□□□□ -0.53
RAB5C-204ENST00000547517 STX7O15400 261 aaKnown RBP11.71□□□□□ -0.53
RAB5C-204ENST00000547517 ZSCAN12O43309 604 aa11.71□□□□□ -0.53
RAB5C-204ENST00000547517 NOBOXO60393 691 aa11.71□□□□□ -0.53
RAB5C-204ENST00000547517 DNAJC6O75061 913 aa11.71□□□□□ -0.53
RAB5C-204ENST00000547517 MTX2O75431 263 aa11.71□□□□□ -0.53
RAB5C-204ENST00000547517 ACP5P13686 325 aa11.71□□□□□ -0.53
RAB5C-204ENST00000547517 ZNF8P17098 575 aaPredicted RBP11.71□□□□□ -0.53
RAB5C-204ENST00000547517 ACTN2P35609 894 aa11.71□□□□□ -0.53
RAB5C-204ENST00000547517 MAZP56270 477 aaKnown RBP11.71□□□□□ -0.53
RAB5C-204ENST00000547517 TARDBPQ13148 414 aaKnown RBP eCLIP11.71□□□□□ -0.53
RAB5C-204ENST00000547517 TAF1AQ15573 450 aaPredicted RBP11.71□□□□□ -0.53
RAB5C-204ENST00000547517 PLA2G4EQ3MJ16 856 aa11.71□□□□□ -0.53
RAB5C-204ENST00000547517 ATP13A5Q4VNC0 1218 aa11.71□□□□□ -0.53
RAB5C-204ENST00000547517 C14orf28Q4W4Y0 310 aa11.71□□□□□ -0.53
RAB5C-204ENST00000547517 ZDHHC20Q5W0Z9 365 aa11.71□□□□□ -0.53
RAB5C-204ENST00000547517 KCTD11Q693B1 232 aa11.71□□□□□ -0.53
RAB5C-204ENST00000547517 CRTC3Q6UUV7 619 aa11.71□□□□□ -0.53
RAB5C-204ENST00000547517 REXO1L1PQ8IX06 675 aa11.71□□□□□ -0.53
RAB5C-204ENST00000547517 KLHDC8BQ8IXV7 354 aa11.71□□□□□ -0.53
RAB5C-204ENST00000547517 SLC35F6Q8N357 371 aa11.71□□□□□ -0.53
RAB5C-204ENST00000547517 PDCD7Q8N8D1 485 aaKnown RBP11.71□□□□□ -0.53
RAB5C-204ENST00000547517 CCDC89Q8N998 374 aa11.71□□□□□ -0.53
RAB5C-204ENST00000547517 GPR156Q8NFN8 814 aa11.71□□□□□ -0.53
RAB5C-204ENST00000547517 GDAP1Q8TB36 358 aa11.71□□□□□ -0.53
RAB5C-204ENST00000547517 ZDHHC1Q8WTX9 485 aa11.71□□□□□ -0.53
RAB5C-204ENST00000547517 CCDC3Q9BQI4 270 aa11.71□□□□□ -0.53
RAB5C-204ENST00000547517 OR2AG1Q9H205 316 aa11.71□□□□□ -0.53
RAB5C-204ENST00000547517 LRRC40Q9H9A6 602 aa11.71□□□□□ -0.53
RAB5C-204ENST00000547517 IL26Q9NPH9 171 aa11.71□□□□□ -0.53
RAB5C-204ENST00000547517 PIH1D1Q9NWS0 290 aaKnown RBP11.71□□□□□ -0.53
RAB5C-204ENST00000547517 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.71□□□□□ -0.532e-16■■□□□ 12.4
RAB5C-204ENST00000547517 ATXN10Q9UBB4 475 aa11.71□□□□□ -0.53
RAB5C-204ENST00000547517 RABGEF1Q9UJ41 708 aa11.71□□□□□ -0.53
RAB5C-204ENST00000547517 KCNK6Q9Y257 313 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms