RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 EXD1Q8NHP7 514 aa20.85■□□□□ 0.93
CHKA-206ENST00000531341 TRIT1Q9H3H1 467 aaKnown RBP20.85■□□□□ 0.93
CHKA-206ENST00000531341 LRRC4CQ9HCJ2 640 aa20.85■□□□□ 0.93
CHKA-206ENST00000531341 NT5MQ9NPB1 228 aa20.85■□□□□ 0.93
CHKA-206ENST00000531341 CROTQ9UKG9 612 aa20.85■□□□□ 0.93
CHKA-206ENST00000531341 A0A0J9YYE9 177 aa20.84■□□□□ 0.93
CHKA-206ENST00000531341 LGALS16A8MUM7 142 aa20.84■□□□□ 0.93
CHKA-206ENST00000531341 SNX2O60749 519 aa20.84■□□□□ 0.93
CHKA-206ENST00000531341 TRBC1P01850 177 aa20.84■□□□□ 0.93
CHKA-206ENST00000531341 PDGFAP04085 211 aa20.84■□□□□ 0.93
CHKA-206ENST00000531341 ACP5P13686 325 aa20.84■□□□□ 0.93
CHKA-206ENST00000531341 DLSTP36957 453 aa20.84■□□□□ 0.93
CHKA-206ENST00000531341 STC1P52823 247 aa20.84■□□□□ 0.93
CHKA-206ENST00000531341 UBXN1Q04323 297 aa20.84■□□□□ 0.93
CHKA-206ENST00000531341 MARC1Q5VT66 337 aa20.84■□□□□ 0.93
CHKA-206ENST00000531341 ZNF765Q7L2R6 523 aa20.84■□□□□ 0.93
CHKA-206ENST00000531341 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.84■□□□□ 0.93
CHKA-206ENST00000531341 ESX1Q8N693 406 aa20.84■□□□□ 0.93
CHKA-206ENST00000531341 TEX19Q8NA77 164 aa20.84■□□□□ 0.93
CHKA-206ENST00000531341 CSPG4P5Q96PW8 444 aa20.84■□□□□ 0.93
CHKA-206ENST00000531341 ZWILCHQ9H900 591 aa20.84■□□□□ 0.93
CHKA-206ENST00000531341 OGFRQ9NZT2 677 aa20.84■□□□□ 0.93
CHKA-206ENST00000531341 LIMA1Q9UHB6 759 aaKnown RBP20.84■□□□□ 0.93
CHKA-206ENST00000531341 KCTD3Q9Y597 815 aa20.84■□□□□ 0.93
CHKA-206ENST00000531341 UNC79Q9P2D8 2635 aa20.83■□□□□ 0.93
CHKA-206ENST00000531341 CLDN7O95471 211 aa20.83■□□□□ 0.93
CHKA-206ENST00000531341 FERP16591 822 aa20.83■□□□□ 0.93
CHKA-206ENST00000531341 MAN1A1P33908 653 aa20.83■□□□□ 0.93
CHKA-206ENST00000531341 SH3BP2P78314 561 aa20.83■□□□□ 0.93
CHKA-206ENST00000531341 FOXM1Q08050 763 aa20.83■□□□□ 0.93
CHKA-206ENST00000531341 MAP7Q14244 749 aa20.83■□□□□ 0.93
CHKA-206ENST00000531341 DPYSL2Q16555 572 aa20.83■□□□□ 0.93
CHKA-206ENST00000531341 TXNRD3NBQ6F5E7 133 aa20.83■□□□□ 0.93
CHKA-206ENST00000531341 TCTN3Q6NUS6 607 aa20.83■□□□□ 0.93
CHKA-206ENST00000531341 TMCO3Q6UWJ1 677 aa20.83■□□□□ 0.93
CHKA-206ENST00000531341 APTXQ7Z2E3 356 aaKnown RBP20.83■□□□□ 0.93
CHKA-206ENST00000531341 SLC9B2Q86UD5 537 aa20.83■□□□□ 0.93
CHKA-206ENST00000531341 TEX26Q8N6G2 289 aa20.83■□□□□ 0.93
CHKA-206ENST00000531341 GALNT6Q8NCL4 622 aa20.83■□□□□ 0.93
CHKA-206ENST00000531341 HSPH1Q92598 858 aa20.83■□□□□ 0.93
CHKA-206ENST00000531341 ERGIC2Q96RQ1 377 aa20.83■□□□□ 0.93
CHKA-206ENST00000531341 ULBP3Q9BZM4 244 aa20.83■□□□□ 0.93
CHKA-206ENST00000531341 PRDM8Q9NQV8 689 aa20.83■□□□□ 0.93
CHKA-206ENST00000531341 CNOT8Q9UFF9 292 aaKnown RBP20.83■□□□□ 0.93
CHKA-206ENST00000531341 FADS2P1A8MWK0 482 aa20.82■□□□□ 0.92
CHKA-206ENST00000531341 H3BRJ5 948 aa20.82■□□□□ 0.92
CHKA-206ENST00000531341 ZNF135P52742 658 aaPredicted RBP20.82■□□□□ 0.92
CHKA-206ENST00000531341 EPHA4P54764 986 aa20.82■□□□□ 0.92
CHKA-206ENST00000531341 RALGPS1Q5JS13 557 aa20.82■□□□□ 0.92
CHKA-206ENST00000531341 C6orf15Q6UXA7 325 aaPredicted RBP20.82■□□□□ 0.92
CHKA-206ENST00000531341 ASB18Q6ZVZ8 466 aa20.82■□□□□ 0.92
CHKA-206ENST00000531341 ATCAYQ86WG3 371 aa20.82■□□□□ 0.92
CHKA-206ENST00000531341 BBS5Q8N3I7 341 aa20.82■□□□□ 0.92
CHKA-206ENST00000531341 ATPAF2Q8N5M1 289 aa20.82■□□□□ 0.92
CHKA-206ENST00000531341 SH3KBP1Q96B97 665 aa20.82■□□□□ 0.92
CHKA-206ENST00000531341 C9orf72Q96LT7 481 aa20.82■□□□□ 0.92
CHKA-206ENST00000531341 SCHIP1Q9P0W5 487 aaPredicted RBP20.82■□□□□ 0.92
CHKA-206ENST00000531341 VPS18Q9P253 973 aa20.82■□□□□ 0.92
CHKA-206ENST00000531341 CPNE7Q9UBL6 633 aa20.82■□□□□ 0.92
CHKA-206ENST00000531341 TLK1Q9UKI8 766 aa20.82■□□□□ 0.92
CHKA-206ENST00000531341 CHKBQ9Y259 395 aa20.82■□□□□ 0.92
CHKA-206ENST00000531341 SPTAN1Q13813 2472 aaKnown RBP20.82■□□□□ 0.92
CHKA-206ENST00000531341 MN1Q10571 1320 aaPredicted RBP20.81■□□□□ 0.92
CHKA-206ENST00000531341 KATNA1O75449 491 aa20.81■□□□□ 0.92
CHKA-206ENST00000531341 PRLP01236 227 aa20.81■□□□□ 0.92
CHKA-206ENST00000531341 F3P13726 295 aa20.81■□□□□ 0.92
CHKA-206ENST00000531341 TYRP1P17643 537 aa20.81■□□□□ 0.92
CHKA-206ENST00000531341 SEPHS1P49903 392 aa20.81■□□□□ 0.92
CHKA-206ENST00000531341 CDH6P55285 790 aa20.81■□□□□ 0.92
CHKA-206ENST00000531341 ITKQ08881 620 aa20.81■□□□□ 0.92
CHKA-206ENST00000531341 ZNF648Q5T619 568 aaPredicted RBP20.81■□□□□ 0.92
CHKA-206ENST00000531341 LYSMD3Q7Z3D4 306 aa20.81■□□□□ 0.92
CHKA-206ENST00000531341 CCDC13Q8IYE1 715 aa20.81■□□□□ 0.92
CHKA-206ENST00000531341 ELMO2Q96JJ3 720 aa20.81■□□□□ 0.92
CHKA-206ENST00000531341 PLEKHG4BQ96PX9 1271 aa20.81■□□□□ 0.92
CHKA-206ENST00000531341 ARFGAP3Q9NP61 516 aa20.81■□□□□ 0.92
CHKA-206ENST00000531341 SLC30A1Q9Y6M5 507 aa20.81■□□□□ 0.92
CHKA-206ENST00000531341 NOTCH2Q04721 2471 aa20.81■□□□□ 0.92
CHKA-206ENST00000531341 MKRN2OSH3BPM6 223 aa20.8■□□□□ 0.92
CHKA-206ENST00000531341 C9P02748 559 aa20.8■□□□□ 0.92
CHKA-206ENST00000531341 FTLP02792 175 aaPredicted RBP20.8■□□□□ 0.92
CHKA-206ENST00000531341 ANKRD34CP0C6C1 535 aa20.8■□□□□ 0.92
CHKA-206ENST00000531341 ZNF30P17039 623 aa20.8■□□□□ 0.92
CHKA-206ENST00000531341 GNLYP22749 145 aa20.8■□□□□ 0.92
CHKA-206ENST00000531341 ARL4AP40617 200 aa20.8■□□□□ 0.92
CHKA-206ENST00000531341 UBE2IP63279 158 aaKnown RBP20.8■□□□□ 0.92
CHKA-206ENST00000531341 DSC2Q02487 901 aa20.8■□□□□ 0.92
CHKA-206ENST00000531341 NSMCE1Q8WV22 266 aa20.8■□□□□ 0.92
CHKA-206ENST00000531341 TGM7Q96PF1 710 aa20.8■□□□□ 0.92
CHKA-206ENST00000531341 OR6C1Q96RD1 312 aa20.8■□□□□ 0.92
CHKA-206ENST00000531341 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.8■□□□□ 0.92
CHKA-206ENST00000531341 STN1Q9H668 368 aaKnown RBP20.8■□□□□ 0.92
CHKA-206ENST00000531341 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.8■□□□□ 0.92
CHKA-206ENST00000531341 PLEKHB1Q9UF11 243 aaPredicted RBP20.8■□□□□ 0.92
CHKA-206ENST00000531341 PCDHB3Q9Y5E6 796 aa20.8■□□□□ 0.92
CHKA-206ENST00000531341 CDC14CA4D256 554 aa20.79■□□□□ 0.92
CHKA-206ENST00000531341 LRRC10BA6NIK2 292 aa20.79■□□□□ 0.92
CHKA-206ENST00000531341 KIF1CO43896 1103 aaKnown RBP20.79■□□□□ 0.92
CHKA-206ENST00000531341 DNAJB5O75953 348 aa20.79■□□□□ 0.92
CHKA-206ENST00000531341 KIAA0754O94854 1291 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms