RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 PLK2Q9NYY3 685 aa5.79□□□□□ -1.48
RNU4-39P-201ENST00000362455 SLC4A4Q9Y6R1 1079 aa5.79□□□□□ -1.48
RNU4-39P-201ENST00000362455 DLG5Q8TDM6 1919 aa5.79□□□□□ -1.48
RNU4-39P-201ENST00000362455 A0A0G2JK05 382 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 A6NNC1 897 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 SEC14L5O43304 696 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 ATP2C2O75185 946 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 IPO7O95373 1038 aaKnown RBP5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 KRT10P13645 584 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 AKR1B1P15121 316 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 SRD5A1P18405 259 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 ITGAXP20702 1163 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 HOXD9P28356 352 aaPredicted RBP5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 ACSL1P33121 698 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 UBA7P41226 1012 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 CXCR3P49682 368 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 F2RL1P55085 397 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 SNX16P57768 344 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 FKBP1AP62942 108 aaKnown RBP5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 PRAMEP78395 509 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 GAD2Q05329 585 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 NIPAL4Q0D2K0 466 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 VGLL4Q14135 290 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 SUPT20HL1Q3ZLR7 823 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 LCE5AQ5TCM9 118 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 CES5AQ6NT32 575 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 SARM1Q6SZW1 724 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 GPSM1Q86YR5 675 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 FAM217AQ8IXS0 508 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 C17orf53Q8N3J3 647 aaPredicted RBP5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 KDM1BQ8NB78 822 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 SLC44A5Q8NCS7 719 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 GJC3Q8NFK1 279 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 FAM84BQ96KN1 310 aaPredicted RBP5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 C1orf74Q96LT6 269 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 SORCS2Q96PQ0 1159 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 MXRA8Q9BRK3 442 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 SEMA4CQ9C0C4 833 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 TMEM39BQ9GZU3 492 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 LHPPQ9H008 270 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 SMARCAD1Q9H4L7 1026 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 TDRD3Q9H7E2 651 aaKnown RBP5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 PLSCR4Q9NRQ2 329 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 FLRT1Q9NZU1 646 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 MSRB1Q9NZV6 116 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 DLGAP2Q9P1A6 1054 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 AAR2Q9Y312 384 aaKnown RBP5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 COX11Q9Y6N1 276 aa5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 KIAA0100Q14667 2235 aaKnown RBP5.78□□□□□ -1.48
RNU4-39P-201ENST00000362455 LAMA3Q16787 3333 aa5.77□□□□□ -1.48
RNU4-39P-201ENST00000362455 FAM205AQ6ZU69 1335 aa5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 CUL9Q8IWT3 2517 aa5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 CCL15-CCL14A0A0B4J2E2 113 aa5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 A0A1W2PPC1 479 aa5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 BTBD18B2RXH4 712 aa5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 ADAM10O14672 748 aa5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 TLX3O43711 291 aaPredicted RBP5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 RBMXL2O75526 392 aaKnown RBP5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 OR2C1O95371 312 aa5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 CLDN7O95471 211 aa5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 HOXB5P09067 269 aa5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 CHRNB1P11230 501 aa5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 CDH8P55286 799 aa5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 OLIG2Q13516 323 aa5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 CAPSQ13938 189 aa5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 WDR43Q15061 677 aaKnown RBP eCLIP5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 CCL15Q16663 113 aa5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 BEND3Q5T5X7 828 aa5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 GKAP1Q5VSY0 366 aaPredicted RBP5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 SLC18B1Q6NT16 456 aa5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 TMEM71Q6P5X7 295 aa5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 DEF8Q6ZN54 512 aa5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 CHST9Q7L1S5 443 aa5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 YTHDF3Q7Z739 585 aaKnown RBP5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 NOXA1Q86UR1 476 aa5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 ADGRF2Q8IZF7 708 aa5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 ZCCHC9Q8N567 271 aaKnown RBP5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 LSMEM1Q8N8F7 131 aa5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 CEP76Q8TAP6 659 aa5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 DNAAF4Q8WXU2 420 aa5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 DDB2Q92466 427 aa5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 PUS3Q9BZE2 481 aaKnown RBP5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 TKTL2Q9H0I9 626 aa5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 NKIRAS2Q9NYR9 191 aa5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 NDRG3Q9UGV2 375 aa5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 TMEM5Q9Y2B1 443 aa5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 LSM4Q9Y4Z0 139 aaKnown RBP5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 A3GALT2U3KPV4 340 aa5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 COL1A1P02452 1464 aaPredicted RBP5.77□□□□□ -1.49
RNU4-39P-201ENST00000362455 UTYO14607 1347 aa5.76□□□□□ -1.49
RNU4-39P-201ENST00000362455 A0A0U1RQF3 1178 aa5.76□□□□□ -1.49
RNU4-39P-201ENST00000362455 A8MZ25 164 aa5.76□□□□□ -1.49
RNU4-39P-201ENST00000362455 TCP10L2B9ZVM9 353 aa5.76□□□□□ -1.49
RNU4-39P-201ENST00000362455 E5RJQ4 531 aa5.76□□□□□ -1.49
RNU4-39P-201ENST00000362455 TLR2O60603 784 aa5.76□□□□□ -1.49
RNU4-39P-201ENST00000362455 MMP3P08254 477 aa5.76□□□□□ -1.49
RNU4-39P-201ENST00000362455 CLTBP09497 229 aa5.76□□□□□ -1.49
RNU4-39P-201ENST00000362455 MCM3P25205 808 aa5.76□□□□□ -1.49
RNU4-39P-201ENST00000362455 GYG1P46976 350 aa5.76□□□□□ -1.49
RNU4-39P-201ENST00000362455 EPS8Q12929 822 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms