RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 MAB21L3Q8N8X9 362 aa16.74■□□□□ 0.27
TSPAN3-201ENST00000267970 RTKNQ9BST9 563 aa16.74■□□□□ 0.27
TSPAN3-201ENST00000267970 FBXO5Q9UKT4 447 aa16.74■□□□□ 0.27
TSPAN3-201ENST00000267970 HCN1O60741 890 aa16.74■□□□□ 0.27
TSPAN3-201ENST00000267970 NDUFS2O75306 463 aa16.74■□□□□ 0.27
TSPAN3-201ENST00000267970 CD48P09326 243 aa16.74■□□□□ 0.27
TSPAN3-201ENST00000267970 FMO3P31513 532 aa16.74■□□□□ 0.27
TSPAN3-201ENST00000267970 RYKP34925 604 aa16.74■□□□□ 0.27
TSPAN3-201ENST00000267970 BRCC3P46736 316 aa16.74■□□□□ 0.27
TSPAN3-201ENST00000267970 QRFPRQ96P65 431 aa16.74■□□□□ 0.27
TSPAN3-201ENST00000267970 PORCNQ9H237 461 aa16.74■□□□□ 0.27
TSPAN3-201ENST00000267970 ATP13A3Q9H7F0 1226 aa16.74■□□□□ 0.27
TSPAN3-201ENST00000267970 NEDD8-MDP1E9PL57 170 aa16.74■□□□□ 0.27
TSPAN3-201ENST00000267970 UBA1P22314 1058 aaKnown RBP16.74■□□□□ 0.27
TSPAN3-201ENST00000267970 TXNL4AP83876 142 aaKnown RBP16.74■□□□□ 0.27
TSPAN3-201ENST00000267970 TRABD2AQ86V40 505 aa16.74■□□□□ 0.27
TSPAN3-201ENST00000267970 CBR4Q8N4T8 237 aa16.74■□□□□ 0.27
TSPAN3-201ENST00000267970 HDAC2Q92769 488 aaKnown RBP16.74■□□□□ 0.27
TSPAN3-201ENST00000267970 HAS1Q92839 578 aa16.74■□□□□ 0.27
TSPAN3-201ENST00000267970 EBF3Q9H4W6 596 aa16.74■□□□□ 0.27
TSPAN3-201ENST00000267970 TULP4Q9NRJ4 1543 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 SEPT4O43236 478 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 CBFA2T3O75081 653 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 IDO1P14902 403 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 RPS12P25398 132 aaKnown RBP16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 RNASEH2BQ5TBB1 312 aaKnown RBP16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 ESRP1Q6NXG1 681 aaKnown RBP16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 SLC30A6Q6NXT4 461 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 ZBTB8BQ8NAP8 495 aaPredicted RBP16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 ARRDC4Q8NCT1 418 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 CD101Q93033 1021 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 PCDHB18PQ96TA0 734 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 ZSCAN5AQ9BUG6 496 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 LRRC19Q9H756 370 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 AGO1Q9UL18 857 aaKnown RBP16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 WASF2Q9Y6W5 498 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 MID1O15344 667 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 SLC26A2P50443 739 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 COL9A2Q14055 689 aaPredicted RBP16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 NAPRTQ6XQN6 538 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 DGCR14Q96DF8 476 aaKnown RBP16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 RNF31Q96EP0 1072 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 VAT1Q99536 393 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 TECPR2O15040 1411 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 SAP18O00422 153 aaKnown RBP16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 TUFMP49411 452 aaKnown RBP16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 JAZF1Q86VZ6 243 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 MTMR9Q96QG7 549 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 TTYH1Q9H313 450 aaPredicted RBP16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 NUP50Q9UKX7 468 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 MAPRE3Q9UPY8 281 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 VWA7Q9Y334 891 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 CPS1P31327 1500 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 NR2F6P10588 404 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 ZNF132P52740 706 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 CDKL1Q00532 357 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 HECTD3Q5T447 861 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 CPTPQ5TA50 214 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 HECTD2Q5U5R9 776 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 SLC9A4Q6AI14 798 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 PLET1Q6UQ28 207 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 CHERPQ8IWX8 916 aaKnown RBP16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 FAM71AQ8IYT1 594 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 IL31RAQ8NI17 732 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 TWIST2Q8WVJ9 160 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 DNASE1L2Q92874 299 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 JSRP1Q96MG2 331 aaPredicted RBP16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 WDR12Q9GZL7 423 aaKnown RBP16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 NEUROD4Q9HD90 331 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 TNFSF13BQ9Y275 285 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 HSPB3Q12988 150 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 ADGRG6Q86SQ4 1221 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 FITM2Q8N6M3 262 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 TNFRSF25Q93038 417 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 MED28Q9H204 178 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 SLC17A6Q9P2U8 582 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 ADAM28Q9UKQ2 775 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 REXO2Q9Y3B8 237 aaKnown RBP16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 IRAK3Q9Y616 596 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 IQSEC2Q5JU85 1478 aa16.73■□□□□ 0.27
TSPAN3-201ENST00000267970 MYCLP1P12525 358 aaPredicted RBP16.72■□□□□ 0.27
TSPAN3-201ENST00000267970 GMFBP60983 142 aa16.72■□□□□ 0.27
TSPAN3-201ENST00000267970 NAE1Q13564 534 aa16.72■□□□□ 0.27
TSPAN3-201ENST00000267970 PCBP2Q15366 365 aaKnown RBP eCLIP16.72■□□□□ 0.275e-7■■■■□ 21.2
TSPAN3-201ENST00000267970 RAB43Q86YS6 212 aa16.72■□□□□ 0.27
TSPAN3-201ENST00000267970 KCT2Q8NC54 265 aa16.72■□□□□ 0.27
TSPAN3-201ENST00000267970 ZNF607Q96SK3 696 aa16.72■□□□□ 0.27
TSPAN3-201ENST00000267970 ALKBH4Q9NXW9 302 aa16.72■□□□□ 0.27
TSPAN3-201ENST00000267970 CACNG4Q9UBN1 327 aa16.72■□□□□ 0.27
TSPAN3-201ENST00000267970 A0A1W2PQH9 124 aa16.72■□□□□ 0.27
TSPAN3-201ENST00000267970 FGF10O15520 208 aaPredicted RBP16.72■□□□□ 0.27
TSPAN3-201ENST00000267970 ALAS2P22557 587 aa16.72■□□□□ 0.27
TSPAN3-201ENST00000267970 MSANTD1Q6ZTZ1 278 aa16.72■□□□□ 0.27
TSPAN3-201ENST00000267970 KCTD8Q6ZWB6 473 aa16.72■□□□□ 0.27
TSPAN3-201ENST00000267970 ZFP28Q8NHY6 868 aa16.72■□□□□ 0.27
TSPAN3-201ENST00000267970 FATE1Q969F0 183 aa16.72■□□□□ 0.27
TSPAN3-201ENST00000267970 SEC14L3Q9UDX4 400 aa16.72■□□□□ 0.27
TSPAN3-201ENST00000267970 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.72■□□□□ 0.27
TSPAN3-201ENST00000267970 MFHAS1Q9Y4C4 1052 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms