RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 ATG10Q9H0Y0 220 aa11.05□□□□□ -0.64
KNOP1-201ENST00000219837 TMEM27Q9HBJ8 222 aa11.05□□□□□ -0.64
KNOP1-201ENST00000219837 EGFL7Q9UHF1 273 aa11.05□□□□□ -0.64
KNOP1-201ENST00000219837 MST1RQ04912 1400 aa11.05□□□□□ -0.64
KNOP1-201ENST00000219837 KIDINS220Q9ULH0 1771 aa11.05□□□□□ -0.64
KNOP1-201ENST00000219837 IRGMA1A4Y4 181 aa11.05□□□□□ -0.64
KNOP1-201ENST00000219837 OR1F1O43749 312 aa11.05□□□□□ -0.64
KNOP1-201ENST00000219837 PSIP1O75475 530 aaKnown RBP11.05□□□□□ -0.64
KNOP1-201ENST00000219837 CLDN11O75508 207 aa11.05□□□□□ -0.64
KNOP1-201ENST00000219837 ZBTB11O95625 1053 aaPredicted RBP11.05□□□□□ -0.64
KNOP1-201ENST00000219837 LYNP07948 512 aa11.05□□□□□ -0.64
KNOP1-201ENST00000219837 SAGP10523 405 aaPredicted RBP11.05□□□□□ -0.64
KNOP1-201ENST00000219837 GNPDA1P46926 289 aa11.05□□□□□ -0.64
KNOP1-201ENST00000219837 RAB2AP61019 212 aa11.05□□□□□ -0.64
KNOP1-201ENST00000219837 PUDPQ08623 228 aa11.05□□□□□ -0.64
KNOP1-201ENST00000219837 SMARCB1Q12824 385 aa11.05□□□□□ -0.64
KNOP1-201ENST00000219837 PGBD2Q6P3X8 592 aa11.05□□□□□ -0.64
KNOP1-201ENST00000219837 ACTL7BQ9Y614 415 aa11.05□□□□□ -0.64
KNOP1-201ENST00000219837 DCCP43146 1447 aa11.05□□□□□ -0.64
KNOP1-201ENST00000219837 EPHB6O15197 1021 aa11.05□□□□□ -0.64
KNOP1-201ENST00000219837 PRKAR1AP10644 381 aa11.05□□□□□ -0.64
KNOP1-201ENST00000219837 PUS10Q3MIT2 529 aaKnown RBP11.05□□□□□ -0.64
KNOP1-201ENST00000219837 TMC8Q8IU68 726 aa11.05□□□□□ -0.64
KNOP1-201ENST00000219837 C12orf56Q8IXR9 622 aa11.05□□□□□ -0.64
KNOP1-201ENST00000219837 STK32AQ8WU08 396 aa11.05□□□□□ -0.64
KNOP1-201ENST00000219837 LENG1Q96BZ8 264 aaPredicted RBP11.05□□□□□ -0.64
KNOP1-201ENST00000219837 IKZF2Q9UKS7 526 aa11.05□□□□□ -0.64
KNOP1-201ENST00000219837 IQCF5A8MTL0 148 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 DDX6P26196 483 aaKnown RBP eCLIP11.04□□□□□ -0.64
KNOP1-201ENST00000219837 MTHFRP42898 656 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 CCT3P49368 545 aaKnown RBP11.04□□□□□ -0.64
KNOP1-201ENST00000219837 RPS6KA3P51812 740 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 PGDP52209 483 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 PPP2R2BQ00005 443 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 ZNF846Q147U1 533 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 LARS2Q15031 903 aaKnown RBP11.04□□□□□ -0.64
KNOP1-201ENST00000219837 ACAP2Q15057 778 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 XYLT1Q86Y38 959 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 STX12Q86Y82 276 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 TSEN2Q8NCE0 465 aaKnown RBP11.04□□□□□ -0.64
KNOP1-201ENST00000219837 PIWIL2Q8TC59 973 aaKnown RBP11.04□□□□□ -0.64
KNOP1-201ENST00000219837 HAS1Q92839 578 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 HMCESQ96FZ2 354 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 EBNA1BP2Q99848 306 aaKnown RBP11.04□□□□□ -0.64
KNOP1-201ENST00000219837 PTPN18Q99952 460 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 DPEP2Q9H4A9 486 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 L2HGDHQ9H9P8 463 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 PNPOQ9NVS9 261 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 UBAP1Q9NZ09 502 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 AGLP35573 1532 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 TREHO43280 583 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 TNFRSF21O75509 655 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 PIAS1O75925 651 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 PTPN2P17706 415 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 CBX5P45973 191 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 RABGGTBP53611 331 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 CAP1Q01518 475 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 SULT1C3Q6IMI6 304 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 VITQ6UXI7 678 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 HDDC3Q8N4P3 179 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 RCN3Q96D15 328 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 GPR20Q99678 358 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 B3GNT5Q9BYG0 378 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 ACSS2Q9NR19 701 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 ABCB10Q9NRK6 738 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 PCDHB1Q9Y5F3 818 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 ARL5CA6NH57 179 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 OR2AG2A6NM03 316 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 ZNF208O43345 1280 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 CCR10P46092 362 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 RTL4Q6ZR62 310 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 ILDR1Q86SU0 546 aaPredicted RBP11.04□□□□□ -0.64
KNOP1-201ENST00000219837 FNIP1Q8TF40 1166 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 KLK6Q92876 244 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 FATE1Q969F0 183 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 EBPLQ9BY08 206 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 PCYOX1Q9UHG3 505 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 SNUPNO95149 360 aaKnown RBP11.04□□□□□ -0.64
KNOP1-201ENST00000219837 PRNPP04156 253 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 TCF4P15884 667 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 FKBP1BP68106 108 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 RPP38P78345 283 aaKnown RBP11.04□□□□□ -0.64
KNOP1-201ENST00000219837 GTF2H2Q13888 395 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 DLG2Q15700 870 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 GTF2H2CQ6P1K8 395 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 PEX5LQ8IYB4 626 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 PSMA8Q8TAA3 256 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 CAPSLQ8WWF8 208 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 CKAP2Q8WWK9 683 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 TLR10Q9BXR5 811 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 PNO1Q9NRX1 252 aaKnown RBP11.04□□□□□ -0.64
KNOP1-201ENST00000219837 DNAJC11Q9NVH1 559 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 BTBD19C9JJ37 291 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 ACRP10323 421 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 EPHA3P29320 983 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 WNT3AP56704 352 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 PRKG2Q13237 762 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 KCTD19Q17RG1 926 aaPredicted RBP11.04□□□□□ -0.64
KNOP1-201ENST00000219837 ZCCHC12Q6PEW1 402 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 CUZD1Q86UP6 607 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms