RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 LRRC66Q68CR7 880 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 RAD9BQ6WBX8 426 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 USP45Q70EL2 814 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 H2AFVQ71UI9 128 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 TRIM74Q86UV6 250 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 PIM3Q86V86 326 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 NAGSQ8N159 534 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 NIPA2Q8N8Q9 360 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 RCBTB1Q8NDN9 531 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 ZNF564Q8TBZ8 553 aaPredicted RBP11.12□□□□□ -0.63
TARDBP-221ENST00000619555 LRRN4Q8WUT4 740 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 SCAMP4Q969E2 229 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 TMEM159Q96B96 161 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 AP2M1Q96CW1 435 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 SGF29Q96ES7 293 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 AGAP2Q99490 1192 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 SLC17A4Q9Y2C5 497 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 REXO2Q9Y3B8 237 aaKnown RBP11.12□□□□□ -0.63
TARDBP-221ENST00000619555 PPIL1Q9Y3C6 166 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 BOD1L1Q8NFC6 3051 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 TRBV23OR9-2A0A075B6M9 112 aa11.11□□□□□ -0.63
TARDBP-221ENST00000619555 IGHV5-10-1A0A0J9YXX1 117 aa11.11□□□□□ -0.63
TARDBP-221ENST00000619555 PPM1DO15297 605 aa11.11□□□□□ -0.63
TARDBP-221ENST00000619555 MFSD11O43934 449 aa11.11□□□□□ -0.63
TARDBP-221ENST00000619555 WT1P19544 449 aaPredicted RBP11.11□□□□□ -0.63
TARDBP-221ENST00000619555 MPSTP25325 297 aa11.11□□□□□ -0.63
TARDBP-221ENST00000619555 ACTR1BP42025 376 aa11.11□□□□□ -0.63
TARDBP-221ENST00000619555 ARSEP51690 589 aa11.11□□□□□ -0.63
TARDBP-221ENST00000619555 ACTR1AP61163 376 aa11.11□□□□□ -0.63
TARDBP-221ENST00000619555 DSC2Q02487 901 aa11.11□□□□□ -0.63
TARDBP-221ENST00000619555 DPTQ07507 201 aa11.11□□□□□ -0.63
TARDBP-221ENST00000619555 BIRC2Q13490 618 aa11.11□□□□□ -0.63
TARDBP-221ENST00000619555 NR1D2Q14995 579 aa11.11□□□□□ -0.63
TARDBP-221ENST00000619555 MANEAQ5SRI9 462 aa11.11□□□□□ -0.63
TARDBP-221ENST00000619555 ADAMTSL4Q6UY14 1074 aa11.11□□□□□ -0.63
TARDBP-221ENST00000619555 MARK2Q7KZI7 788 aaKnown RBP11.11□□□□□ -0.63
TARDBP-221ENST00000619555 DTX1Q86Y01 620 aa11.11□□□□□ -0.63
TARDBP-221ENST00000619555 FAM71BQ8TC56 605 aa11.11□□□□□ -0.63
TARDBP-221ENST00000619555 CTNNBL1Q8WYA6 563 aaPredicted RBP11.11□□□□□ -0.63
TARDBP-221ENST00000619555 PMEPA1Q969W9 287 aa11.11□□□□□ -0.63
TARDBP-221ENST00000619555 SCARF2Q96GP6 870 aaPredicted RBP11.11□□□□□ -0.63
TARDBP-221ENST00000619555 GRPEL1Q9HAV7 217 aa11.11□□□□□ -0.63
TARDBP-221ENST00000619555 RBM22Q9NW64 420 aaKnown RBP eCLIP11.11□□□□□ -0.631e-7■■■■□ 20.3
TARDBP-221ENST00000619555 IMPACTQ9P2X3 320 aa11.11□□□□□ -0.63
TARDBP-221ENST00000619555 CHKBQ9Y259 395 aa11.11□□□□□ -0.63
TARDBP-221ENST00000619555 HECTD1Q9ULT8 2610 aa11.1□□□□□ -0.63
TARDBP-221ENST00000619555 BSNQ9UPA5 3926 aa11.1□□□□□ -0.63
TARDBP-221ENST00000619555 A0A0J9YYE9 177 aa11.1□□□□□ -0.63
TARDBP-221ENST00000619555 RCCD1A6NED2 376 aa11.1□□□□□ -0.63
TARDBP-221ENST00000619555 MYO1FO00160 1098 aa11.1□□□□□ -0.63
TARDBP-221ENST00000619555 INPP4BO15327 924 aa11.1□□□□□ -0.63
TARDBP-221ENST00000619555 PRLP01236 227 aa11.1□□□□□ -0.63
TARDBP-221ENST00000619555 TRBC1P01850 177 aa11.1□□□□□ -0.63
TARDBP-221ENST00000619555 GJC1P36383 396 aa11.1□□□□□ -0.63
TARDBP-221ENST00000619555 GARSP41250 739 aaKnown RBP11.1□□□□□ -0.63
TARDBP-221ENST00000619555 GPR3P46089 330 aa11.1□□□□□ -0.63
TARDBP-221ENST00000619555 NIPAL4Q0D2K0 466 aa11.1□□□□□ -0.63
TARDBP-221ENST00000619555 GALNT2Q10471 571 aa11.1□□□□□ -0.63
TARDBP-221ENST00000619555 DPYSL3Q14195 570 aa11.1□□□□□ -0.63
TARDBP-221ENST00000619555 PAFAH1B3Q15102 231 aaKnown RBP11.1□□□□□ -0.63
TARDBP-221ENST00000619555 PYCR3Q53H96 274 aa11.1□□□□□ -0.63
TARDBP-221ENST00000619555 NCBP2-AS2Q69YL0 99 aa11.1□□□□□ -0.63
TARDBP-221ENST00000619555 ZNF761Q86XN6 746 aaPredicted RBP11.1□□□□□ -0.63
TARDBP-221ENST00000619555 LRRC49Q8IUZ0 686 aa11.1□□□□□ -0.63
TARDBP-221ENST00000619555 CCDC170Q8IYT3 715 aa11.1□□□□□ -0.63
TARDBP-221ENST00000619555 NDUFAF2Q8N183 169 aa11.1□□□□□ -0.63
TARDBP-221ENST00000619555 SLC35G2Q8TBE7 412 aa11.1□□□□□ -0.63
TARDBP-221ENST00000619555 JPH3Q8WXH2 748 aaPredicted RBP11.1□□□□□ -0.63
TARDBP-221ENST00000619555 MAML1Q92585 1016 aa11.1□□□□□ -0.63
TARDBP-221ENST00000619555 EXTL1Q92935 676 aa11.1□□□□□ -0.63
TARDBP-221ENST00000619555 CCDC74BQ96LY2 380 aa11.1□□□□□ -0.63
TARDBP-221ENST00000619555 OR2M4Q96R27 311 aa11.1□□□□□ -0.63
TARDBP-221ENST00000619555 RIOK2Q9BVS4 552 aaKnown RBP11.1□□□□□ -0.63
TARDBP-221ENST00000619555 POLR1EQ9GZS1 481 aaKnown RBP11.1□□□□□ -0.63
TARDBP-221ENST00000619555 AKAP7Q9P0M2 348 aaPredicted RBP11.1□□□□□ -0.63
TARDBP-221ENST00000619555 SEPT10Q9P0V9 454 aa11.1□□□□□ -0.63
TARDBP-221ENST00000619555 CTTNBP2NLQ9P2B4 639 aa11.1□□□□□ -0.63
TARDBP-221ENST00000619555 RCOR3Q9P2K3 495 aaPredicted RBP11.1□□□□□ -0.63
TARDBP-221ENST00000619555 UVRAGQ9P2Y5 699 aa11.1□□□□□ -0.63
TARDBP-221ENST00000619555 TTLL3Q9Y4R7 772 aa11.1□□□□□ -0.63
TARDBP-221ENST00000619555 PCDHB11Q9Y5F2 797 aa11.1□□□□□ -0.63
TARDBP-221ENST00000619555 PCYT1BQ9Y5K3 369 aaPredicted RBP11.1□□□□□ -0.63
TARDBP-221ENST00000619555 NBASA2RRP1 2371 aa11.1□□□□□ -0.63
TARDBP-221ENST00000619555 IGHV1OR21-1A0A087WYE8 117 aa11.09□□□□□ -0.63
TARDBP-221ENST00000619555 A0A0U1RQJ8 604 aa11.09□□□□□ -0.63
TARDBP-221ENST00000619555 MATN3O15232 486 aa11.09□□□□□ -0.63
TARDBP-221ENST00000619555 MTA2O94776 668 aa11.09□□□□□ -0.63
TARDBP-221ENST00000619555 NDUFA10O95299 355 aa11.09□□□□□ -0.63
TARDBP-221ENST00000619555 CLDN7O95471 211 aa11.09□□□□□ -0.63
TARDBP-221ENST00000619555 ASMTLO95671 621 aa11.09□□□□□ -0.63
TARDBP-221ENST00000619555 EML2O95834 649 aa11.09□□□□□ -0.63
TARDBP-221ENST00000619555 FGF3P11487 239 aaPredicted RBP11.09□□□□□ -0.63
TARDBP-221ENST00000619555 CSF2RBP32927 897 aa11.09□□□□□ -0.63
TARDBP-221ENST00000619555 MAGEA1P43355 309 aa11.09□□□□□ -0.63
TARDBP-221ENST00000619555 ARSDP51689 593 aa11.09□□□□□ -0.63
TARDBP-221ENST00000619555 STC1P52823 247 aa11.09□□□□□ -0.63
TARDBP-221ENST00000619555 LIMK2P53671 638 aa11.09□□□□□ -0.63
TARDBP-221ENST00000619555 EPHB1P54762 984 aa11.09□□□□□ -0.63
TARDBP-221ENST00000619555 TAS2R40P59535 323 aa11.09□□□□□ -0.63
TARDBP-221ENST00000619555 CYP4F2P78329 520 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms