RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 TMEM184AQ6ZMB5 413 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 SZRD1Q7Z422 152 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 MON1AQ86VX9 555 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 TICAM1Q8IUC6 712 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 BRSK2Q8IWQ3 736 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 THNSL1Q8IYQ7 743 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 ADGRF2Q8IZF7 708 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 TTC9BQ8N6N2 239 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 GPATCH11Q8N954 259 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 TCEAL3Q969E4 200 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 RFKQ969G6 155 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 ZNF845Q96IR2 970 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 HIC2Q96JB3 615 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 ADAM2Q99965 735 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 SSBP3Q9BWW4 388 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 FSD1LQ9BXM9 530 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 TEX12Q9BXU0 123 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 CADM1Q9BY67 442 aaKnown RBP4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 TXLNGYQ9BZA5 131 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 DNAJC18Q9H819 358 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 KAT14Q9H8E8 782 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 PRMT8Q9NR22 394 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 SH3GLB2Q9NR46 395 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 PDGFCQ9NRA1 345 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 DUSP22Q9NRW4 184 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 SERTAD4Q9NUC0 356 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 BABAM1Q9NWV8 329 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 FBXO40Q9UH90 709 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 DHDHQ9UQ10 334 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 MTF2Q9Y483 593 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 DENND4AQ7Z401 1863 aa4.9□□□□□ -1.63
HMGB1P23-201ENST00000518743 SVILO95425 2214 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 NF1P21359 2839 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 PARP14Q460N5 1801 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 ASB14A6NK59 587 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 LRRC53A6NM62 1247 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 RSPH10B2B2RC85 870 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 EIF3CLB5ME19 914 aaKnown RBP4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 MCIDASD6RGH6 385 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 H0Y626 953 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 SUV39H1O43463 412 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 FAM20BO75063 409 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 TRIM16O95361 564 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 DNTTP04053 509 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 ITGB3P05106 788 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 URODP06132 367 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 APOA4P06727 396 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 ENO1P06733 434 aaKnown RBP4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 CHRM2P08172 466 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 LINC00271P0C7V0 271 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 RSPH10BP0C881 870 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 NR2F6P10588 404 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 ITGAMP11215 1152 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 BMP7P18075 431 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 CSRP1P21291 193 aaKnown RBP4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 SAT1P21673 171 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 CD72P21854 359 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 ELAVL4P26378 380 aaKnown RBP4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 FMO4P31512 558 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 SKIV2L2P42285 1042 aaKnown RBP4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 MTNR1AP48039 350 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 ADPRHP54922 357 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 EEFSECP57772 596 aaKnown RBP4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 OLR1P78380 273 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 LMAN2Q12907 356 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 PRPF4BQ13523 1007 aaKnown RBP4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 BECN1Q14457 450 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 ALDH1L2Q3SY69 923 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 ATG9BQ674R7 924 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 KAZNQ674X7 775 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 KIAA0895LQ68EN5 471 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 DPY19L3Q6ZPD9 716 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 GPR149Q86SP6 731 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 FOXP4Q8IVH2 680 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 CPXM2Q8N436 756 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 SLC44A3Q8N4M1 653 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 FRMD1Q8N878 549 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 CHST13Q8NET6 341 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 FEZF2Q8TBJ5 459 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 LENG9Q96B70 501 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 PGAM5Q96HS1 289 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 SPATA17Q96L03 361 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 AIFM2Q9BRQ8 373 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 RSPH9Q9H1X1 276 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 ZNF768Q9H5H4 540 aaKnown RBP4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 SLC35C2Q9NQQ7 365 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 CHORDC1Q9UHD1 332 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 VPS4AQ9UN37 437 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 ADAMTS5Q9UNA0 930 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 MTMR6Q9Y217 621 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 Q9Y3F1 56 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 TESMINQ9Y4I5 508 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 HEMK1Q9Y5R4 338 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 LRBAP50851 2863 aa4.89□□□□□ -1.63
HMGB1P23-201ENST00000518743 COL5A1P20908 1838 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P23-201ENST00000518743 ICE1Q9Y2F5 2266 aa4.88□□□□□ -1.63
HMGB1P23-201ENST00000518743 GPR75-ASB3A0A0A6YYF3 556 aa4.88□□□□□ -1.63
HMGB1P23-201ENST00000518743 A0A1W2PQM1 296 aa4.88□□□□□ -1.63
HMGB1P23-201ENST00000518743 A0A1W2PRG0 241 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms