RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 ZNF781Q8N8C0 355 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 ACBD6Q9BR61 282 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 WWP1Q9H0M0 922 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 CREBZFQ9NS37 354 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 XPR1Q9UBH6 696 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 CORINQ9Y5Q5 1042 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 ARID2Q68CP9 1835 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 ILVBLA1L0T0 632 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 DPYSL4O14531 572 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 CLOCKO15516 846 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 HADHAP40939 763 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 RALGPS1Q5JS13 557 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 RTP2Q5QGT7 225 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 GALNT18Q6P9A2 607 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 DHRS4L2Q6PKH6 230 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 LPCAT1Q8NF37 534 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 MYLIPQ8WY64 445 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 TBATAQ96M53 351 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 OLFM1Q99784 485 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 CIB1Q99828 191 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 NMRAL1Q9HBL8 299 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 C8orf4Q9NR00 106 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 CDC14AQ9UNH5 594 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 RWDD3Q9Y3V2 267 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 PTCH2Q9Y6C5 1203 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 GJB5O95377 273 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 BMP10O95393 424 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 GKP32189 559 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 RBM20Q5T481 1227 aaKnown RBP12.31□□□□□ -0.44
USP11-206ENST00000469080 PRR23BQ6ZRT6 265 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 DDIASQ8IXT1 998 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 LINC00469Q8N7U9 141 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 PEX13Q92968 403 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 SMG9Q9H0W8 520 aaKnown RBP12.31□□□□□ -0.44
USP11-206ENST00000469080 ALG9Q9H6U8 611 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 ZNF696Q9H7X3 374 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 ADA2Q9NZK5 511 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 ADAM28Q9UKQ2 775 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 ANK1P16157 1881 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 FAM95CA0A1B0GW59 222 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 H0Y626 953 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 IRAK2O43187 625 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 MBL2P11226 248 aaPredicted RBP12.31□□□□□ -0.44
USP11-206ENST00000469080 COL6A1P12109 1028 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 PRKCAP17252 672 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 SERPINB9P50453 376 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 COPZ1P61923 177 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 SELENBP1Q13228 472 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 SEMA5AQ13591 1074 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 DNASE1L3Q13609 305 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 RPS6KA2Q15349 733 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 IGSF11Q5DX21 431 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 ZRANB3Q5FWF4 1079 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 SPDYAQ5MJ70 313 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 LRRC8DQ7L1W4 858 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 SETD3Q86TU7 594 aaPredicted RBP12.31□□□□□ -0.44
USP11-206ENST00000469080 PIM3Q86V86 326 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 RPL10LQ96L21 214 aaKnown RBP12.31□□□□□ -0.44
USP11-206ENST00000469080 WDR70Q9NW82 654 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.31□□□□□ -0.44
USP11-206ENST00000469080 ZNF229Q9UJW7 825 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 ERGIC3Q9Y282 383 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 GLRA3O75311 464 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 SULT1C4O75897 302 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 PRLP01236 227 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 BPGMP07738 259 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 PSMC3P17980 439 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 LRPAP1P30533 357 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 RPL9P32969 192 aaKnown RBP12.31□□□□□ -0.44
USP11-206ENST00000469080 SLC11A1P49279 550 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 HNRNPFP52597 415 aaKnown RBP12.31□□□□□ -0.44
USP11-206ENST00000469080 GNG2P59768 71 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 NIPAL4Q0D2K0 466 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 FAM156AQ8NDB6 213 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 OR13C4Q8NGS5 318 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 IGSF8Q969P0 613 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 ISOC1Q96CN7 298 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 ZNF486Q96H40 463 aaPredicted RBP12.31□□□□□ -0.44
USP11-206ENST00000469080 TMEM169Q96HH4 297 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 SLC45A3Q96JT2 553 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 UNC93B1Q9H1C4 597 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 GLOD4Q9HC38 313 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 SLC45A1Q9Y2W3 748 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 ARL5AQ9Y689 179 aa12.31□□□□□ -0.44
USP11-206ENST00000469080 A0A1W2PQ45 241 aaPredicted RBP12.3□□□□□ -0.44
USP11-206ENST00000469080 A0A1W2PQY0 241 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 SH3BGRLO75368 114 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 MFN2O95140 757 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 STMN1P16949 149 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 CXCR2P25025 360 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 NUDT2P50583 147 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 P2RX3P56373 397 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 PTK2BQ14289 1009 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 MBTPS1Q14703 1052 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 MAPRE1Q15691 268 aaKnown RBP12.3□□□□□ -0.44
USP11-206ENST00000469080 KIF19Q2TAC6 998 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 PXDC1Q5TGL8 231 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 GPR107Q5VW38 600 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 FBXL22Q6P050 247 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 SCD5Q86SK9 330 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms