RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 CREB1P16220 341 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 FPR1P21462 350 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 SYT1P21579 422 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 NDST2P52849 883 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 TFF3Q07654 80 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 PEX6Q13608 980 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 TAF12Q16514 161 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 EDRF1Q3B7T1 1238 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 FAM180AQ6UWF9 173 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 DEF8Q6ZN54 512 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 HTR3DQ70Z44 454 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 CCDC186Q7Z3E2 898 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 ANKS1BQ7Z6G8 1248 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 DCP1BQ8IZD4 617 aaKnown RBP3.75□□□□□ -1.81
CNGA1-203ENST00000420489 MAB21L3Q8N8X9 362 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 ZNF548Q8NEK5 533 aaPredicted RBP3.75□□□□□ -1.81
CNGA1-203ENST00000420489 NTNG2Q96CW9 530 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 SERAC1Q96JX3 654 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 PIGSQ96S52 555 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 SEC62Q99442 399 aaKnown RBP3.75□□□□□ -1.81
CNGA1-203ENST00000420489 VKORC1Q9BQB6 163 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 RBM4Q9BWF3 364 aaKnown RBP3.75□□□□□ -1.81
CNGA1-203ENST00000420489 SMYD2Q9NRG4 433 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 MED29Q9NX70 200 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 MEMO1Q9Y316 297 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 PCDHGB3Q9Y5G1 929 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 ZFHX3Q15911 3703 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 NYNRINQ9P2P1 1898 aaKnown RBP3.75□□□□□ -1.81
CNGA1-203ENST00000420489 ITIH6Q6UXX5 1313 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 MYH9P35579 1960 aaKnown RBP3.75□□□□□ -1.81
CNGA1-203ENST00000420489 GOLGA4Q13439 2230 aaKnown RBP3.75□□□□□ -1.81
CNGA1-203ENST00000420489 C1QTNF3-AMACRE9PGA6 284 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 M0QYT0 321 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 AQP9O43315 295 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 NEMFO60524 1076 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 CCNE2O96020 404 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 CRYABP02511 175 aaKnown RBP3.75□□□□□ -1.81
CNGA1-203ENST00000420489 PLEKP08567 350 aaPredicted RBP3.75□□□□□ -1.81
CNGA1-203ENST00000420489 CYP3A4P08684 503 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 LRPAP1P30533 357 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 ACSL1P33121 698 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 ECI1P42126 302 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 PCYT1AP49585 367 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 KRT85P78386 507 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 KDSRQ06136 332 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 ITGB3BPQ13352 177 aaPredicted RBP3.75□□□□□ -1.81
CNGA1-203ENST00000420489 Q5PR19 223 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 OTUD1Q5VV17 481 aaPredicted RBP3.75□□□□□ -1.81
CNGA1-203ENST00000420489 RINT1Q6NUQ1 792 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 MZT2AQ6P582 158 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 ZNF354CQ86Y25 554 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 CDC20BQ86Y33 519 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 PPIL6Q8IXY8 311 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 B3GALNT2Q8NCR0 500 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 MYCBPAPQ8TBZ2 947 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 ERCC4Q92889 916 aaPredicted RBP3.75□□□□□ -1.81
CNGA1-203ENST00000420489 NOX5Q96PH1 765 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 LENG8Q96PV6 779 aaPredicted RBP3.75□□□□□ -1.81
CNGA1-203ENST00000420489 SLC2A13Q96QE2 648 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 GORASP1Q9BQQ3 440 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 TNMDQ9H2S6 317 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 PCIF1Q9H4Z3 704 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 GPR83Q9NYM4 423 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 DTLQ9NZJ0 730 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 LRIT1Q9P2V4 623 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 LIMCH1Q9UPQ0 1083 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 DNAH1Q9P2D7 4330 aa3.75□□□□□ -1.81
CNGA1-203ENST00000420489 ANAPC1Q9H1A4 1944 aa3.74□□□□□ -1.81
CNGA1-203ENST00000420489 A6NL46 340 aa3.74□□□□□ -1.81
CNGA1-203ENST00000420489 FAM25EA8MYX2 175 aa3.74□□□□□ -1.81
CNGA1-203ENST00000420489 KIF2AO00139 706 aaPredicted RBP3.74□□□□□ -1.81
CNGA1-203ENST00000420489 HTRA2O43464 458 aaPredicted RBP3.74□□□□□ -1.81
CNGA1-203ENST00000420489 RNASEH1O60930 286 aaKnown RBP3.74□□□□□ -1.81
CNGA1-203ENST00000420489 DDAH1O94760 285 aa3.74□□□□□ -1.81
CNGA1-203ENST00000420489 B3GAT3O94766 335 aa3.74□□□□□ -1.81
CNGA1-203ENST00000420489 CD63P08962 238 aa3.74□□□□□ -1.81
CNGA1-203ENST00000420489 HPDP32754 393 aaPredicted RBP3.74□□□□□ -1.81
CNGA1-203ENST00000420489 HSPA4P34932 840 aa3.74□□□□□ -1.81
CNGA1-203ENST00000420489 MC3RP41968 323 aa3.74□□□□□ -1.81
CNGA1-203ENST00000420489 RCAN1P53805 252 aa3.74□□□□□ -1.81
CNGA1-203ENST00000420489 SH3BGRP55822 239 aaPredicted RBP3.74□□□□□ -1.81
CNGA1-203ENST00000420489 GFRA1P56159 465 aa3.74□□□□□ -1.81
CNGA1-203ENST00000420489 APBA1Q02410 837 aa3.74□□□□□ -1.81
CNGA1-203ENST00000420489 YWHAHQ04917 246 aaPredicted RBP3.74□□□□□ -1.81
CNGA1-203ENST00000420489 KCNB1Q14721 858 aa3.74□□□□□ -1.81
CNGA1-203ENST00000420489 PRAMEF17Q5VTA0 474 aa3.74□□□□□ -1.81
CNGA1-203ENST00000420489 ALKAL1Q6UXT8 129 aa3.74□□□□□ -1.81
CNGA1-203ENST00000420489 C1orf122Q6ZSJ8 110 aa3.74□□□□□ -1.81
CNGA1-203ENST00000420489 TAX1BP1Q86VP1 789 aa3.74□□□□□ -1.81
CNGA1-203ENST00000420489 P3H2Q8IVL5 708 aa3.74□□□□□ -1.81
CNGA1-203ENST00000420489 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.74□□□□□ -1.81
CNGA1-203ENST00000420489 FAM169BQ8N8A8 192 aa3.74□□□□□ -1.81
CNGA1-203ENST00000420489 BMPERQ8N8U9 685 aa3.74□□□□□ -1.81
CNGA1-203ENST00000420489 DENND6BQ8NEG7 585 aa3.74□□□□□ -1.81
CNGA1-203ENST00000420489 LILRB1Q8NHL6 650 aaPredicted RBP3.74□□□□□ -1.81
CNGA1-203ENST00000420489 HAS2Q92819 552 aa3.74□□□□□ -1.81
CNGA1-203ENST00000420489 LMLNQ96KR4 655 aa3.74□□□□□ -1.81
CNGA1-203ENST00000420489 SIGLEC12Q96PQ1 595 aa3.74□□□□□ -1.81
CNGA1-203ENST00000420489 DMRTA2Q96SC8 542 aa3.74□□□□□ -1.81
CNGA1-203ENST00000420489 CDK5RAP1Q96SZ6 601 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms