RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 MFSD14AQ96MC6 490 aa4.61□□□□□ -1.67
SF3B1-202ENST00000409915 ZNF560Q96MR9 790 aa4.61□□□□□ -1.67
SF3B1-202ENST00000409915 DACH2Q96NX9 599 aa4.61□□□□□ -1.67
SF3B1-202ENST00000409915 PGLYRP2Q96PD5 576 aa4.61□□□□□ -1.67
SF3B1-202ENST00000409915 ALPK1Q96QP1 1244 aa4.61□□□□□ -1.67
SF3B1-202ENST00000409915 PNKPQ96T60 521 aa4.61□□□□□ -1.67
SF3B1-202ENST00000409915 CDCA3Q99618 268 aaPredicted RBP4.61□□□□□ -1.67
SF3B1-202ENST00000409915 HNRNPABQ99729 332 aaKnown RBP4.61□□□□□ -1.67
SF3B1-202ENST00000409915 TSG101Q99816 390 aa4.61□□□□□ -1.67
SF3B1-202ENST00000409915 CLSTN3Q9BQT9 956 aa4.61□□□□□ -1.67
SF3B1-202ENST00000409915 SLC25A18Q9H1K4 315 aa4.61□□□□□ -1.67
SF3B1-202ENST00000409915 MUC13Q9H3R2 512 aa4.61□□□□□ -1.67
SF3B1-202ENST00000409915 PLEKHA4Q9H4M7 779 aa4.61□□□□□ -1.67
SF3B1-202ENST00000409915 SMURF2Q9HAU4 748 aa4.61□□□□□ -1.67
SF3B1-202ENST00000409915 PIDD1Q9HB75 910 aa4.61□□□□□ -1.67
SF3B1-202ENST00000409915 RXFP1Q9HBX9 757 aa4.61□□□□□ -1.67
SF3B1-202ENST00000409915 CYP4F12Q9HCS2 524 aa4.61□□□□□ -1.67
SF3B1-202ENST00000409915 TDP1Q9NUW8 608 aa4.61□□□□□ -1.67
SF3B1-202ENST00000409915 TAS2R10Q9NYW0 307 aa4.61□□□□□ -1.67
SF3B1-202ENST00000409915 C6orf203Q9P0P8 240 aaPredicted RBP4.61□□□□□ -1.67
SF3B1-202ENST00000409915 CD207Q9UJ71 328 aa4.61□□□□□ -1.67
SF3B1-202ENST00000409915 ITGA11Q9UKX5 1188 aa4.61□□□□□ -1.67
SF3B1-202ENST00000409915 DSEQ9UL01 958 aa4.61□□□□□ -1.67
SF3B1-202ENST00000409915 TRAF3IP3Q9Y228 551 aa4.61□□□□□ -1.67
SF3B1-202ENST00000409915 CARD8Q9Y2G2 431 aa4.61□□□□□ -1.67
SF3B1-202ENST00000409915 SNX9Q9Y5X1 595 aa4.61□□□□□ -1.67
SF3B1-202ENST00000409915 IRAK3Q9Y616 596 aa4.61□□□□□ -1.67
SF3B1-202ENST00000409915 SCN1AP35498 2009 aa4.61□□□□□ -1.67
SF3B1-202ENST00000409915 MUC3AQ02505 3323 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 TTC28Q96AY4 2481 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 KANSL1LA0AUZ9 987 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 WDR27A2RRH5 827 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 PRAMEF25A6NGN4 478 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 NUDT19A8MXV4 375 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 KPNA7A9QM74 516 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 AKR1B15C9JRZ8 316 aaPredicted RBP4.6□□□□□ -1.67
SF3B1-202ENST00000409915 H7BY64 318 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 M0QZQ0 153 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 BTN3A1O00481 513 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 CYB561D2O14569 222 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 SYN3O14994 580 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 LSM1O15116 133 aaKnown RBP4.6□□□□□ -1.67
SF3B1-202ENST00000409915 CETN3O15182 167 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 CCL16O15467 120 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 MBTPS2O43462 519 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 DNPH1O43598 174 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 TRAPPC3O43617 180 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 PRPSAP2O60256 369 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 BUB1BO60566 1050 aaPredicted RBP4.6□□□□□ -1.67
SF3B1-202ENST00000409915 KLHL41O60662 606 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 RGS9O75916 674 aaPredicted RBP4.6□□□□□ -1.67
SF3B1-202ENST00000409915 PCDH8O95206 1070 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 SEC24AO95486 1093 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 VNN1O95497 513 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 VNN2O95498 520 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 HLA-DRAP01903 254 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 C8AP07357 584 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 GSTM1P09488 218 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 PTPN2P17706 415 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 ENDOUP21128 410 aaKnown RBP4.6□□□□□ -1.67
SF3B1-202ENST00000409915 CCNCP24863 283 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 GRK5P34947 590 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 GP5P40197 560 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 BUD31P41223 144 aaPredicted RBP4.6□□□□□ -1.67
SF3B1-202ENST00000409915 VAMP7P51809 220 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 SOX8P57073 446 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 SNRPFP62306 86 aaKnown RBP4.6□□□□□ -1.67
SF3B1-202ENST00000409915 VSNL1P62760 191 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 NTHL1P78549 312 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 MRPS5P82675 430 aaKnown RBP4.6□□□□□ -1.67
SF3B1-202ENST00000409915 YWHAHQ04917 246 aaPredicted RBP4.6□□□□□ -1.67
SF3B1-202ENST00000409915 LRRC63Q05C16 580 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 SMAD4Q13485 552 aaKnown RBP4.6□□□□□ -1.67
SF3B1-202ENST00000409915 NFIL3Q16649 462 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 DUOXA2Q1HG44 320 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 ZNF699Q32M78 642 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 EDRF1Q3B7T1 1238 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 LEXMQ3ZCV2 418 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 SLC44A4Q53GD3 710 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 HSP90AA4PQ58FG1 418 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 ZNF805Q5CZA5 627 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 TMTC4Q5T4D3 741 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 GARNL3Q5VVW2 1013 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 TCERG1LQ5VWI1 586 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 CENPPQ6IPU0 288 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 SPOPLQ6IQ16 392 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 ANO7Q6IWH7 933 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 PET117Q6UWS5 81 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 UNQ6494/PRO21346Q6UXR6 183 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 CCDC121Q6ZUS5 278 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 C11orf57Q6ZUT1 292 aaPredicted RBP4.6□□□□□ -1.67
SF3B1-202ENST00000409915 NANOGNBQ7Z5D8 188 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.6□□□□□ -1.67
SF3B1-202ENST00000409915 METTL23Q86XA0 190 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 PPP1R3BQ86XI6 285 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 ZC3H3Q8IXZ2 948 aaKnown RBP4.6□□□□□ -1.67
SF3B1-202ENST00000409915 ADGRF2Q8IZF7 708 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 Q8N3U1 123 aa4.6□□□□□ -1.67
SF3B1-202ENST00000409915 GLB1L3Q8NCI6 653 aaPredicted RBP4.6□□□□□ -1.67
SF3B1-202ENST00000409915 SMRP1Q8NCR6 262 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms