RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 PECAM1P16284 738 aaPredicted RBP21.18■□□□□ 0.98
UBE2D3-201ENST00000321805 CTNNA1P35221 906 aaKnown RBP21.18■□□□□ 0.98
UBE2D3-201ENST00000321805 ADCY8P40145 1251 aa21.18■□□□□ 0.98
UBE2D3-201ENST00000321805 PDX1P52945 283 aa21.18■□□□□ 0.98
UBE2D3-201ENST00000321805 GALNT3Q14435 633 aa21.18■□□□□ 0.98
UBE2D3-201ENST00000321805 COL28A1Q2UY09 1125 aa21.18■□□□□ 0.98
UBE2D3-201ENST00000321805 BBS12Q6ZW61 710 aa21.18■□□□□ 0.98
UBE2D3-201ENST00000321805 CCNJLQ8IV13 435 aa21.18■□□□□ 0.98
UBE2D3-201ENST00000321805 WDR36Q8NI36 951 aaKnown RBP21.18■□□□□ 0.98
UBE2D3-201ENST00000321805 ZDHHC1Q8WTX9 485 aa21.18■□□□□ 0.98
UBE2D3-201ENST00000321805 ATXN7L3BQ96GX2 97 aa21.18■□□□□ 0.98
UBE2D3-201ENST00000321805 DCBLD2Q96PD2 775 aa21.18■□□□□ 0.98
UBE2D3-201ENST00000321805 AGAP2Q99490 1192 aa21.18■□□□□ 0.98
UBE2D3-201ENST00000321805 LRRN3Q9H3W5 708 aa21.18■□□□□ 0.98
UBE2D3-201ENST00000321805 SYNDIG1Q9H7V2 258 aa21.18■□□□□ 0.98
UBE2D3-201ENST00000321805 RMI1Q9H9A7 625 aa21.18■□□□□ 0.98
UBE2D3-201ENST00000321805 ZFYVE1Q9HBF4 777 aa21.18■□□□□ 0.98
UBE2D3-201ENST00000321805 THSD1Q9NS62 852 aa21.18■□□□□ 0.98
UBE2D3-201ENST00000321805 TFR2Q9UP52 801 aa21.18■□□□□ 0.98
UBE2D3-201ENST00000321805 EFR3BQ9Y2G0 817 aa21.18■□□□□ 0.98
UBE2D3-201ENST00000321805 CCDC187A0A096LP49 1063 aa21.17■□□□□ 0.98
UBE2D3-201ENST00000321805 APOC4-APOC2K7ER74 178 aa21.17■□□□□ 0.98
UBE2D3-201ENST00000321805 ZW10O43264 779 aa21.17■□□□□ 0.98
UBE2D3-201ENST00000321805 NDST3O95803 873 aa21.17■□□□□ 0.98
UBE2D3-201ENST00000321805 APOC2P02655 101 aa21.17■□□□□ 0.98
UBE2D3-201ENST00000321805 RPLP0P05388 317 aaKnown RBP21.17■□□□□ 0.98
UBE2D3-201ENST00000321805 POLD2P49005 469 aa21.17■□□□□ 0.98
UBE2D3-201ENST00000321805 MARCKSL1P49006 195 aa21.17■□□□□ 0.98
UBE2D3-201ENST00000321805 PCBP4P57723 403 aaKnown RBP21.17■□□□□ 0.98
UBE2D3-201ENST00000321805 CTBSQ01459 385 aa21.17■□□□□ 0.98
UBE2D3-201ENST00000321805 XRCC4Q13426 336 aa21.17■□□□□ 0.98
UBE2D3-201ENST00000321805 PYCR3Q53H96 274 aa21.17■□□□□ 0.98
UBE2D3-201ENST00000321805 C3orf38Q5JPI3 329 aa21.17■□□□□ 0.98
UBE2D3-201ENST00000321805 PDPK2PQ6A1A2 396 aa21.17■□□□□ 0.98
UBE2D3-201ENST00000321805 CCDC70Q6NSX1 233 aa21.17■□□□□ 0.98
UBE2D3-201ENST00000321805 DOK6Q6PKX4 331 aa21.17■□□□□ 0.98
UBE2D3-201ENST00000321805 C19orf48Q6RUI8 117 aa21.17■□□□□ 0.98
UBE2D3-201ENST00000321805 LYSMD3Q7Z3D4 306 aa21.17■□□□□ 0.98
UBE2D3-201ENST00000321805 ZNF438Q7Z4V0 828 aa21.17■□□□□ 0.98
UBE2D3-201ENST00000321805 GALNT13Q8IUC8 556 aa21.17■□□□□ 0.98
UBE2D3-201ENST00000321805 ZNF248Q8NDW4 579 aa21.17■□□□□ 0.98
UBE2D3-201ENST00000321805 HNRNPLLQ8WVV9 542 aaKnown RBP21.17■□□□□ 0.98
UBE2D3-201ENST00000321805 TMEM74Q96NL1 305 aa21.17■□□□□ 0.98
UBE2D3-201ENST00000321805 WDR24Q96S15 920 aa21.17■□□□□ 0.98
UBE2D3-201ENST00000321805 ASCL3Q9NQ33 180 aa21.17■□□□□ 0.98
UBE2D3-201ENST00000321805 LRIT1Q9P2V4 623 aa21.17■□□□□ 0.98
UBE2D3-201ENST00000321805 SAE1Q9UBE0 346 aaPredicted RBP21.17■□□□□ 0.98
UBE2D3-201ENST00000321805 SATB2Q9UPW6 733 aa21.17■□□□□ 0.98
UBE2D3-201ENST00000321805 UNC13CQ8NB66 2214 aa21.17■□□□□ 0.98
UBE2D3-201ENST00000321805 ZFC3H1O60293 1989 aaKnown RBP21.16■□□□□ 0.98
UBE2D3-201ENST00000321805 A0A1W2PQM1 296 aa21.16■□□□□ 0.98
UBE2D3-201ENST00000321805 CCDC66A2RUB6 948 aa21.16■□□□□ 0.98
UBE2D3-201ENST00000321805 PJA2O43164 708 aa21.16■□□□□ 0.98
UBE2D3-201ENST00000321805 FGF1P05230 155 aa21.16■□□□□ 0.98
UBE2D3-201ENST00000321805 CCKBRP32239 447 aa21.16■□□□□ 0.98
UBE2D3-201ENST00000321805 PTPN7P35236 360 aa21.16■□□□□ 0.98
UBE2D3-201ENST00000321805 VAV2P52735 878 aa21.16■□□□□ 0.98
UBE2D3-201ENST00000321805 CCL7P80098 99 aa21.16■□□□□ 0.98
UBE2D3-201ENST00000321805 ADCY2Q08462 1091 aa21.16■□□□□ 0.98
UBE2D3-201ENST00000321805 WASHC5Q12768 1159 aa21.16■□□□□ 0.98
UBE2D3-201ENST00000321805 NR1D2Q14995 579 aa21.16■□□□□ 0.98
UBE2D3-201ENST00000321805 CLPPQ16740 277 aaPredicted RBP21.16■□□□□ 0.98
UBE2D3-201ENST00000321805 SPRED1Q7Z699 444 aa21.16■□□□□ 0.98
UBE2D3-201ENST00000321805 TXLNBQ8N3L3 684 aa21.16■□□□□ 0.98
UBE2D3-201ENST00000321805 KRT35Q92764 455 aa21.16■□□□□ 0.98
UBE2D3-201ENST00000321805 QKIQ96PU8 341 aaKnown RBP eCLIP21.16■□□□□ 0.985e-10■■■□□ 18.8
UBE2D3-201ENST00000321805 ZSCAN5AQ9BUG6 496 aa21.16■□□□□ 0.98
UBE2D3-201ENST00000321805 STRADBQ9C0K7 418 aa21.16■□□□□ 0.98
UBE2D3-201ENST00000321805 SUDS3Q9H7L9 328 aaPredicted RBP21.16■□□□□ 0.98
UBE2D3-201ENST00000321805 SPATS2LQ9NUQ6 558 aaKnown RBP21.16■□□□□ 0.98
UBE2D3-201ENST00000321805 FAM153AQ9UHL3 310 aa21.16■□□□□ 0.98
UBE2D3-201ENST00000321805 ZNF711Q9Y462 761 aa21.16■□□□□ 0.98
UBE2D3-201ENST00000321805 PCDHA3Q9Y5H8 950 aa21.16■□□□□ 0.98
UBE2D3-201ENST00000321805 RNF215Q9Y6U7 377 aa21.16■□□□□ 0.98
UBE2D3-201ENST00000321805 RCCD1A6NED2 376 aa21.15■□□□□ 0.98
UBE2D3-201ENST00000321805 GPR89AB7ZAQ6 455 aa21.15■□□□□ 0.98
UBE2D3-201ENST00000321805 MT-CYBP00156 380 aaPredicted RBP21.15■□□□□ 0.98
UBE2D3-201ENST00000321805 EPOP01588 193 aa21.15■□□□□ 0.98
UBE2D3-201ENST00000321805 GPR89BP0CG08 455 aa21.15■□□□□ 0.98
UBE2D3-201ENST00000321805 AK4P27144 223 aaPredicted RBP21.15■□□□□ 0.98
UBE2D3-201ENST00000321805 RBMS1P29558 406 aaKnown RBP21.15■□□□□ 0.98
UBE2D3-201ENST00000321805 ACTR1BP42025 376 aa21.15■□□□□ 0.98
UBE2D3-201ENST00000321805 TNNT3P45378 269 aaPredicted RBP21.15■□□□□ 0.98
UBE2D3-201ENST00000321805 ACTR1AP61163 376 aa21.15■□□□□ 0.98
UBE2D3-201ENST00000321805 PCSK7Q16549 785 aa21.15■□□□□ 0.98
UBE2D3-201ENST00000321805 SLC30A9Q6PML9 568 aa21.15■□□□□ 0.98
UBE2D3-201ENST00000321805 RAD9BQ6WBX8 426 aa21.15■□□□□ 0.98
UBE2D3-201ENST00000321805 TMC3Q7Z5M5 1100 aa21.15■□□□□ 0.98
UBE2D3-201ENST00000321805 PDZD3Q86UT5 571 aa21.15■□□□□ 0.98
UBE2D3-201ENST00000321805 TRIM74Q86UV6 250 aa21.15■□□□□ 0.98
UBE2D3-201ENST00000321805 ZC3H18Q86VM9 953 aaKnown RBP21.15■□□□□ 0.98
UBE2D3-201ENST00000321805 GAS2L3Q86XJ1 694 aa21.15■□□□□ 0.98
UBE2D3-201ENST00000321805 SPATA22Q8NHS9 363 aa21.15■□□□□ 0.98
UBE2D3-201ENST00000321805 PTCD2Q8WV60 388 aaKnown RBP21.15■□□□□ 0.98
UBE2D3-201ENST00000321805 HTR3CQ8WXA8 447 aa21.15■□□□□ 0.98
UBE2D3-201ENST00000321805 SLC46A1Q96NT5 459 aa21.15■□□□□ 0.98
UBE2D3-201ENST00000321805 FERMT1Q9BQL6 677 aa21.15■□□□□ 0.98
UBE2D3-201ENST00000321805 KLHL8Q9P2G9 620 aaPredicted RBP21.15■□□□□ 0.98
UBE2D3-201ENST00000321805 IMPACTQ9P2X3 320 aa21.15■□□□□ 0.98
UBE2D3-201ENST00000321805 TRHDEQ9UKU6 1024 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms