RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 PRAMEF10O60809 474 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 PGLSO95336 258 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 PDHA1P08559 390 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 CYP2A6P11509 494 aaPredicted RBP11.14□□□□□ -0.63
TARDBP-221ENST00000619555 IL4RP24394 825 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 MMP13P45452 471 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 MAPK10P53779 464 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 CDK3Q00526 305 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 MMRN1Q13201 1228 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 C16orf72Q14CZ0 275 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 PHF19Q5T6S3 580 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 MARC1Q5VT66 337 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 RAET1GQ6H3X3 334 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 DOK6Q6PKX4 331 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 USP53Q70EK8 1073 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 ZFAND4Q86XD8 727 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 TMEM139Q8IV31 216 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 BBS5Q8N3I7 341 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 KIAA1524Q8TCG1 905 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 NSMCE1Q8WV22 266 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 TEKT4Q8WW24 435 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 PIH1D2Q8WWB5 315 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 PATE1Q8WXA2 126 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 USP7Q93009 1102 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 SCRN2Q96FV2 425 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 CCDC42Q96M95 316 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 PANX2Q96RD6 677 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 MCCC1Q96RQ3 725 aaPredicted RBP11.14□□□□□ -0.63
TARDBP-221ENST00000619555 NUP85Q9BW27 656 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 GSDMCQ9BYG8 508 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 RDH14Q9HBH5 336 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 NT5MQ9NPB1 228 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 FOXJ2Q9P0K8 574 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 TAAR2Q9P1P5 351 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 CD84Q9UIB8 345 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 ACSL6Q9UKU0 697 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 SUFUQ9UMX1 484 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 TFR2Q9UP52 801 aa11.14□□□□□ -0.63
TARDBP-221ENST00000619555 SOWAHDA6NJG2 315 aa11.13□□□□□ -0.63
TARDBP-221ENST00000619555 RHPN2P1A8MT19 583 aa11.13□□□□□ -0.63
TARDBP-221ENST00000619555 C9orf172C9J069 976 aa11.13□□□□□ -0.63
TARDBP-221ENST00000619555 PSMD11O00231 422 aa11.13□□□□□ -0.63
TARDBP-221ENST00000619555 ECEL1O95672 775 aa11.13□□□□□ -0.63
TARDBP-221ENST00000619555 CD48P09326 243 aa11.13□□□□□ -0.63
TARDBP-221ENST00000619555 ALDH4A1P30038 563 aa11.13□□□□□ -0.63
TARDBP-221ENST00000619555 ADCY8P40145 1251 aa11.13□□□□□ -0.63
TARDBP-221ENST00000619555 CDH6P55285 790 aa11.13□□□□□ -0.63
TARDBP-221ENST00000619555 CTBSQ01459 385 aa11.13□□□□□ -0.63
TARDBP-221ENST00000619555 SLC25A11Q02978 314 aaKnown RBP11.13□□□□□ -0.63
TARDBP-221ENST00000619555 ILF3Q12906 894 aaKnown RBP eCLIP11.13□□□□□ -0.636e-6■□□□□ 8.6
TARDBP-221ENST00000619555 PIGHQ14442 188 aaPredicted RBP11.13□□□□□ -0.63
TARDBP-221ENST00000619555 KRT81Q14533 505 aa11.13□□□□□ -0.63
TARDBP-221ENST00000619555 IHHQ14623 411 aa11.13□□□□□ -0.63
TARDBP-221ENST00000619555 MAP9Q49MG5 647 aa11.13□□□□□ -0.63
TARDBP-221ENST00000619555 ARMC12Q5T9G4 340 aa11.13□□□□□ -0.63
TARDBP-221ENST00000619555 SLC30A9Q6PML9 568 aa11.13□□□□□ -0.63
TARDBP-221ENST00000619555 ZNF574Q6ZN55 896 aaPredicted RBP11.13□□□□□ -0.63
TARDBP-221ENST00000619555 ZNF438Q7Z4V0 828 aa11.13□□□□□ -0.63
TARDBP-221ENST00000619555 TECPR1Q7Z6L1 1165 aa11.13□□□□□ -0.63
TARDBP-221ENST00000619555 VASH2Q86V25 355 aa11.13□□□□□ -0.63
TARDBP-221ENST00000619555 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.13□□□□□ -0.63
TARDBP-221ENST00000619555 TEX26Q8N6G2 289 aa11.13□□□□□ -0.63
TARDBP-221ENST00000619555 EXD3Q8N9H8 876 aa11.13□□□□□ -0.63
TARDBP-221ENST00000619555 MED8Q96G25 268 aa11.13□□□□□ -0.63
TARDBP-221ENST00000619555 CMKLR1Q99788 373 aa11.13□□□□□ -0.63
TARDBP-221ENST00000619555 SEMA3CQ99985 751 aa11.13□□□□□ -0.63
TARDBP-221ENST00000619555 NUDT22Q9BRQ3 303 aa11.13□□□□□ -0.63
TARDBP-221ENST00000619555 ABCG8Q9H221 673 aa11.13□□□□□ -0.63
TARDBP-221ENST00000619555 TRNAU1APQ9NX07 287 aaKnown RBP11.13□□□□□ -0.63
TARDBP-221ENST00000619555 KCTD5Q9NXV2 234 aa11.13□□□□□ -0.63
TARDBP-221ENST00000619555 IP6K2Q9UHH9 426 aa11.13□□□□□ -0.63
TARDBP-221ENST00000619555 ANAPC7Q9UJX3 599 aa11.13□□□□□ -0.63
TARDBP-221ENST00000619555 TMEM98Q9Y2Y6 226 aa11.13□□□□□ -0.63
TARDBP-221ENST00000619555 ZFC3H1O60293 1989 aaKnown RBP11.13□□□□□ -0.63
TARDBP-221ENST00000619555 SDK2Q58EX2 2172 aa11.13□□□□□ -0.63
TARDBP-221ENST00000619555 B8ZZF3 427 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 PYCARD-AS1I3L0S3 204 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 J3QKU1 62 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 FZD6O60353 706 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 MAP3K6O95382 1288 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 LCA5LO95447 670 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 CPNE6O95741 557 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 SOD1P00441 154 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 IVLP07476 585 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 H2AFZP0C0S5 128 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 TMEM253P0C7T8 217 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 LIPCP11150 499 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 CCL4P13236 92 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 NFKBIAP25963 317 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 TEAD1P28347 426 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 CD1CP29017 333 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 SERPINB6P35237 376 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 SSR1P43307 286 aaKnown RBP11.12□□□□□ -0.63
TARDBP-221ENST00000619555 GPR1P46091 355 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 PTSQ03393 145 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 ITKQ08881 620 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 LINC00303Q3SY05 128 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 ATP13A4Q4VNC1 1196 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 RALGPS1Q5JS13 557 aa11.12□□□□□ -0.63
TARDBP-221ENST00000619555 NKAIN2Q5VXU1 208 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms